RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C ATG27P46989 271 aa3.69□□□□□ -1.82
RUB1YDR139C RSM23Q01163 450 aa3.69□□□□□ -1.82
RUB1YDR139C SMA1Q02651 245 aa3.69□□□□□ -1.82
RUB1YDR139C YDL121CQ07541 149 aa3.69□□□□□ -1.82
RUB1YDR139C RTT109Q07794 436 aa3.69□□□□□ -1.82
RUB1YDR139C RPS10AQ08745 105 aaPredicted RBP3.69□□□□□ -1.82
RUB1YDR139C YPL272CQ08984 517 aa3.69□□□□□ -1.82
RUB1YDR139C MF(ALPHA)1P01149 165 aa3.68□□□□□ -1.82
RUB1YDR139C PUP3P25451 205 aaKnown RBP3.68□□□□□ -1.82
RUB1YDR139C POL4P25615 582 aa3.68□□□□□ -1.82
RUB1YDR139C YKL100CP34248 587 aa3.68□□□□□ -1.82
RUB1YDR139C GCS1P35197 352 aa3.68□□□□□ -1.82
RUB1YDR139C PHD1P36093 366 aa3.68□□□□□ -1.82
RUB1YDR139C ROT2P38138 954 aa3.68□□□□□ -1.82
RUB1YDR139C AFG3P39925 761 aa3.68□□□□□ -1.82
RUB1YDR139C MEP2P41948 499 aa3.68□□□□□ -1.82
RUB1YDR139C STB2P46679 850 aa3.68□□□□□ -1.82
RUB1YDR139C PYK2P52489 506 aaKnown RBP3.68□□□□□ -1.82
RUB1YDR139C LUC7Q07508 261 aaPredicted RBP3.68□□□□□ -1.82
RUB1YDR139C BSC1Q12140 328 aa3.68□□□□□ -1.82
RUB1YDR139C SPE4Q12455 300 aa3.68□□□□□ -1.82
RUB1YDR139C SEC53P07283 254 aaKnown RBP3.67□□□□□ -1.82
RUB1YDR139C AAC3P18238 307 aa3.67□□□□□ -1.82
RUB1YDR139C SAN1P22470 610 aa3.67□□□□□ -1.82
RUB1YDR139C BUD5P25300 642 aaPredicted RBP3.67□□□□□ -1.82
RUB1YDR139C BOS1P25385 244 aa3.67□□□□□ -1.82
RUB1YDR139C IMG1P25626 169 aa3.67□□□□□ -1.82
RUB1YDR139C MCM4P30665 933 aaKnown RBP3.67□□□□□ -1.82
RUB1YDR139C SNC1P31109 117 aa3.67□□□□□ -1.82
RUB1YDR139C TRS65P32893 560 aa3.67□□□□□ -1.82
RUB1YDR139C YBL055CP34220 418 aaPredicted RBP3.67□□□□□ -1.82
RUB1YDR139C MIC60P36112 540 aa3.67□□□□□ -1.82
RUB1YDR139C NOP4P37838 685 aaKnown RBP3.67□□□□□ -1.82
RUB1YDR139C ICS2P38284 255 aa3.67□□□□□ -1.82
RUB1YDR139C LAG1P38703 411 aa3.67□□□□□ -1.82
RUB1YDR139C FLC2P39719 783 aa3.67□□□□□ -1.82
RUB1YDR139C YIR014WP40570 242 aa3.67□□□□□ -1.82
RUB1YDR139C NGL3Q03210 505 aa3.67□□□□□ -1.82
RUB1YDR139C YMR160WQ03823 816 aa3.67□□□□□ -1.82
RUB1YDR139C SSK1Q07084 712 aa3.67□□□□□ -1.82
RUB1YDR139C FMP40Q08968 688 aaPredicted RBP3.67□□□□□ -1.82
RUB1YDR139C NMD4Q12129 218 aa3.67□□□□□ -1.82
RUB1YDR139C ARP6Q12509 438 aa3.67□□□□□ -1.82
RUB1YDR139C BAR1P12630 587 aa3.66□□□□□ -1.82
RUB1YDR139C KGD1P20967 1014 aaKnown RBP3.66□□□□□ -1.82
RUB1YDR139C CMK1P27466 446 aaKnown RBP3.66□□□□□ -1.82
RUB1YDR139C SYN8P31377 255 aa3.66□□□□□ -1.82
RUB1YDR139C SSE2P32590 693 aaKnown RBP3.66□□□□□ -1.82
RUB1YDR139C NUP133P36161 1157 aa3.66□□□□□ -1.82
RUB1YDR139C RRP3P38712 501 aaKnown RBP3.66□□□□□ -1.82
RUB1YDR139C RTT107P38850 1070 aa3.66□□□□□ -1.82
RUB1YDR139C AZF1P41696 914 aa3.66□□□□□ -1.82
RUB1YDR139C UPF3P48412 387 aaKnown RBP3.66□□□□□ -1.82
RUB1YDR139C APT1P49435 187 aaKnown RBP3.66□□□□□ -1.82
RUB1YDR139C LCL3P53153 274 aa3.66□□□□□ -1.82
RUB1YDR139C CUL3P53202 744 aa3.66□□□□□ -1.82
RUB1YDR139C NRT1Q08485 598 aa3.66□□□□□ -1.82
RUB1YDR139C NDD1Q08887 554 aa3.66□□□□□ -1.82
RUB1YDR139C CDC23P16522 626 aa3.65□□□□□ -1.83
RUB1YDR139C PPZ1P26570 692 aa3.65□□□□□ -1.83
RUB1YDR139C YBR144CP34215 104 aa3.65□□□□□ -1.83
RUB1YDR139C MTR2P34232 184 aaKnown RBP3.65□□□□□ -1.83
RUB1YDR139C SPC34P36131 295 aa3.65□□□□□ -1.83
RUB1YDR139C AXL1P40851 1208 aa3.65□□□□□ -1.83
RUB1YDR139C SMM1P53720 384 aaKnown RBP3.65□□□□□ -1.83
RUB1YDR139C DUG3P53871 357 aa3.65□□□□□ -1.83
RUB1YDR139C YVH1Q02256 364 aaKnown RBP3.65□□□□□ -1.83
RUB1YDR139C TMA64Q04600 565 aaKnown RBP3.65□□□□□ -1.83
RUB1YDR139C RCN2Q12044 265 aa3.65□□□□□ -1.83
RUB1YDR139C CSR2Q12734 1121 aa3.65□□□□□ -1.83
RUB1YDR139C GLN3P18494 730 aa3.64□□□□□ -1.83
RUB1YDR139C TYR1P20049 452 aa3.64□□□□□ -1.83
RUB1YDR139C SUI2P20459 304 aaKnown RBP3.64□□□□□ -1.83
RUB1YDR139C ERG1P32476 496 aaKnown RBP3.64□□□□□ -1.83
RUB1YDR139C UBP11P36026 717 aa3.64□□□□□ -1.83
RUB1YDR139C RPL32P38061 130 aaKnown RBP3.64□□□□□ -1.83
RUB1YDR139C RIM2P38127 377 aa3.64□□□□□ -1.83
RUB1YDR139C CIN4P39110 191 aa3.64□□□□□ -1.83
RUB1YDR139C VID30P53076 958 aa3.64□□□□□ -1.83
RUB1YDR139C DSD1P53095 428 aa3.64□□□□□ -1.83
RUB1YDR139C YGL082WP53155 381 aa3.64□□□□□ -1.83
RUB1YDR139C SUB1P54000 292 aaKnown RBP3.64□□□□□ -1.83
RUB1YDR139C MSS11Q03825 758 aa3.64□□□□□ -1.83
RUB1YDR139C YEH1Q07804 573 aa3.64□□□□□ -1.83
RUB1YDR139C CDC45Q08032 650 aa3.64□□□□□ -1.83
RUB1YDR139C SDH5Q08230 162 aa3.64□□□□□ -1.83
RUB1YDR139C BUD21Q08492 214 aaPredicted RBP3.64□□□□□ -1.83
RUB1YDR139C SGS1P35187 1447 aa3.63□□□□□ -1.83
RUB1YDR139C SEC1P30619 724 aaKnown RBP3.63□□□□□ -1.83
RUB1YDR139C IMP2'P32351 346 aa3.63□□□□□ -1.83
RUB1YDR139C CCT6P39079 546 aa3.63□□□□□ -1.83
RUB1YDR139C GUF1P46943 645 aa3.63□□□□□ -1.83
RUB1YDR139C SNG1P46950 547 aa3.63□□□□□ -1.83
RUB1YDR139C TDA7P53882 636 aaPredicted RBP3.63□□□□□ -1.83
RUB1YDR139C MSC1Q03104 513 aa3.63□□□□□ -1.83
RUB1YDR139C FMP45Q07651 309 aa3.63□□□□□ -1.83
RUB1YDR139C YEH2Q07950 538 aa3.63□□□□□ -1.83
RUB1YDR139C CTI6Q08923 506 aa3.63□□□□□ -1.83
RUB1YDR139C YPT6Q99260 215 aa3.63□□□□□ -1.83
RUB1YDR139C EST1P17214 699 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms