RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C LTP1P40347 161 aa4.14□□□□□ -1.75
SHU2YDR078C YJL107CP42947 387 aa4.14□□□□□ -1.75
SHU2YDR078C PTR3P43606 678 aa4.14□□□□□ -1.75
SHU2YDR078C ASI1P54074 624 aa4.14□□□□□ -1.75
SHU2YDR078C RMT2Q03305 412 aa4.14□□□□□ -1.75
SHU2YDR078C SXM1Q04175 944 aaKnown RBP4.14□□□□□ -1.75
SHU2YDR078C YLR352WQ06479 807 aa4.14□□□□□ -1.75
SHU2YDR078C PMT1P33775 817 aa4.13□□□□□ -1.75
SHU2YDR078C YKL100CP34248 587 aa4.13□□□□□ -1.75
SHU2YDR078C MIA40P36046 403 aa4.13□□□□□ -1.75
SHU2YDR078C ARP1P38696 384 aa4.13□□□□□ -1.75
SHU2YDR078C ANS1P38832 159 aa4.13□□□□□ -1.75
SHU2YDR078C RIX1P38883 763 aaPredicted RBP4.13□□□□□ -1.75
SHU2YDR078C YJL068CP40363 299 aa4.13□□□□□ -1.75
SHU2YDR078C LYS20P48570 428 aaKnown RBP4.13□□□□□ -1.75
SHU2YDR078C ATP23P53722 227 aa4.13□□□□□ -1.75
SHU2YDR078C EMI2Q04409 500 aaKnown RBP4.13□□□□□ -1.75
SHU2YDR078C YLR345WQ06137 509 aa4.13□□□□□ -1.75
SHU2YDR078C OSW1Q08692 278 aa4.13□□□□□ -1.75
SHU2YDR078C ARG81P05085 880 aa4.12□□□□□ -1.75
SHU2YDR078C TUB1P09733 447 aaKnown RBP4.12□□□□□ -1.75
SHU2YDR078C NUP1P20676 1076 aa4.12□□□□□ -1.75
SHU2YDR078C STB6P36085 766 aa4.12□□□□□ -1.75
SHU2YDR078C FLO10P36170 1169 aa4.12□□□□□ -1.75
SHU2YDR078C CIN4P39110 191 aa4.12□□□□□ -1.75
SHU2YDR078C SSU1P41930 458 aa4.12□□□□□ -1.75
SHU2YDR078C HXT14P42833 540 aa4.12□□□□□ -1.75
SHU2YDR078C IRC7P43623 340 aa4.12□□□□□ -1.75
SHU2YDR078C RPS10BP46784 105 aaKnown RBP4.12□□□□□ -1.75
SHU2YDR078C RPA49Q01080 415 aaPredicted RBP4.12□□□□□ -1.75
SHU2YDR078C SWF1Q04629 336 aa4.12□□□□□ -1.75
SHU2YDR078C ADE13Q05911 482 aaKnown RBP4.12□□□□□ -1.75
SHU2YDR078C ECM30Q06673 1274 aa4.12□□□□□ -1.75
SHU2YDR078C IRC3Q06683 689 aa4.12□□□□□ -1.75
SHU2YDR078C RPS10AQ08745 105 aaPredicted RBP4.12□□□□□ -1.75
SHU2YDR078C ISA2Q12425 185 aa4.12□□□□□ -1.75
SHU2YDR078C YRF1-4O13559 1382 aa4.12□□□□□ -1.75
SHU2YDR078C BNR1P40450 1375 aa4.12□□□□□ -1.75
SHU2YDR078C HSP82P02829 709 aaKnown RBP4.11□□□□□ -1.75
SHU2YDR078C BUD14P27637 709 aa4.11□□□□□ -1.75
SHU2YDR078C GAC1P28006 793 aa4.11□□□□□ -1.75
SHU2YDR078C RPL32P38061 130 aaKnown RBP4.11□□□□□ -1.75
SHU2YDR078C MSR1P38714 643 aa4.11□□□□□ -1.75
SHU2YDR078C LRP1P38801 184 aaKnown RBP4.11□□□□□ -1.75
SHU2YDR078C VPS41P38959 992 aa4.11□□□□□ -1.75
SHU2YDR078C STB2P46679 850 aa4.11□□□□□ -1.75
SHU2YDR078C SGF73P53165 657 aa4.11□□□□□ -1.75
SHU2YDR078C MSC1Q03104 513 aa4.11□□□□□ -1.75
SHU2YDR078C ORM2Q06144 216 aa4.11□□□□□ -1.75
SHU2YDR078C FRE3Q08905 711 aa4.11□□□□□ -1.75
SHU2YDR078C PFA4Q12006 378 aa4.11□□□□□ -1.75
SHU2YDR078C NDJ1Q12366 352 aa4.11□□□□□ -1.75
SHU2YDR078C YDL007C-AQ2V2Q0 85 aa4.11□□□□□ -1.75
SHU2YDR078C PUT2P07275 575 aa4.1□□□□□ -1.75
SHU2YDR078C REC107P21651 314 aa4.1□□□□□ -1.75
SHU2YDR078C URE2P23202 354 aaKnown RBP4.1□□□□□ -1.75
SHU2YDR078C MBR1P23493 339 aa4.1□□□□□ -1.75
SHU2YDR078C YCR051WP25631 222 aa4.1□□□□□ -1.75
SHU2YDR078C COQ3P27680 312 aa4.1□□□□□ -1.75
SHU2YDR078C YME1P32795 747 aa4.1□□□□□ -1.75
SHU2YDR078C PEX2P32800 271 aa4.1□□□□□ -1.75
SHU2YDR078C MTR2P34232 184 aaKnown RBP4.1□□□□□ -1.75
SHU2YDR078C GCS1P35197 352 aa4.1□□□□□ -1.75
SHU2YDR078C RFC1P38630 861 aaKnown RBP4.1□□□□□ -1.75
SHU2YDR078C UBP8P50102 471 aa4.1□□□□□ -1.75
SHU2YDR078C RSM23Q01163 450 aa4.1□□□□□ -1.75
SHU2YDR078C PDS5Q04264 1277 aa4.1□□□□□ -1.75
SHU2YDR078C ERB1Q04660 807 aaKnown RBP4.1□□□□□ -1.75
SHU2YDR078C COQ9Q05779 260 aa4.1□□□□□ -1.75
SHU2YDR078C VTA1Q06263 330 aa4.1□□□□□ -1.75
SHU2YDR078C ATG26Q06321 1198 aa4.1□□□□□ -1.75
SHU2YDR078C FRE7Q12333 620 aa4.1□□□□□ -1.75
SHU2YDR078C ISN1Q99312 450 aa4.1□□□□□ -1.75
SHU2YDR078C YML133CQ03099 1374 aa4.1□□□□□ -1.75
SHU2YDR078C YLL067CQ07888 1374 aa4.1□□□□□ -1.75
SHU2YDR078C YLL066CQ99208 1374 aa4.1□□□□□ -1.75
SHU2YDR078C HOM2P13663 365 aaKnown RBP4.09□□□□□ -1.75
SHU2YDR078C PMS1P14242 873 aa4.09□□□□□ -1.75
SHU2YDR078C CLC1P17891 233 aa4.09□□□□□ -1.75
SHU2YDR078C ELO2P25358 347 aa4.09□□□□□ -1.75
SHU2YDR078C CDC60P26637 1090 aaKnown RBP4.09□□□□□ -1.75
SHU2YDR078C PAP1P29468 568 aaKnown RBP4.09□□□□□ -1.75
SHU2YDR078C DLD2P46681 530 aaKnown RBP4.09□□□□□ -1.75
SHU2YDR078C NMD5P46970 1048 aa4.09□□□□□ -1.75
SHU2YDR078C PYK2P52489 506 aaKnown RBP4.09□□□□□ -1.75
SHU2YDR078C BNI5P53890 448 aaKnown RBP4.09□□□□□ -1.75
SHU2YDR078C RCF1Q03713 159 aa4.09□□□□□ -1.75
SHU2YDR078C ARX1Q03862 593 aaKnown RBP4.09□□□□□ -1.75
SHU2YDR078C RBS1Q05672 457 aaKnown RBP4.09□□□□□ -1.75
SHU2YDR078C CDC45Q08032 650 aa4.09□□□□□ -1.75
SHU2YDR078C ERG11P10614 530 aa4.08□□□□□ -1.76
SHU2YDR078C APE1P14904 514 aa4.08□□□□□ -1.76
SHU2YDR078C CNA1P23287 553 aa4.08□□□□□ -1.76
SHU2YDR078C CLB1P24868 471 aa4.08□□□□□ -1.76
SHU2YDR078C HXT3P32466 567 aaKnown RBP4.08□□□□□ -1.76
SHU2YDR078C SWI3P32591 825 aa4.08□□□□□ -1.76
SHU2YDR078C UBA4P38820 440 aa4.08□□□□□ -1.76
SHU2YDR078C SNO3P43544 222 aa4.08□□□□□ -1.76
SHU2YDR078C YGR126WP53274 230 aa4.08□□□□□ -1.76
SHU2YDR078C IDP3P53982 420 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms