RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASM4	YDL088C	MRPL4	P36517	319 aa		2.8	□□□□□ -1.96
ASM4	YDL088C	RPR2	P40571	144 aa		2.8	□□□□□ -1.96
ASM4	YDL088C	SPG5	P42933	373 aa		2.8	□□□□□ -1.96
ASM4	YDL088C	RPS7B	P48164	190 aa	Known RBP	2.8	□□□□□ -1.96
ASM4	YDL088C	UBX4	P54730	416 aa		2.8	□□□□□ -1.96
ASM4	YDL088C	MUB1	Q03162	620 aa		2.8	□□□□□ -1.96
ASM4	YDL088C	ERP1	Q05359	219 aa	Known RBP	2.8	□□□□□ -1.96
ASM4	YDL088C	GLO2	Q05584	274 aa		2.8	□□□□□ -1.96
ASM4	YDL088C	SKG3	Q06315	1026 aa		2.8	□□□□□ -1.96
ASM4	YDL088C	GRC3	Q07845	632 aa		2.8	□□□□□ -1.96
ASM4	YDL088C	NKP1	Q12493	238 aa		2.8	□□□□□ -1.96
ASM4	YDL088C	PUT2	P07275	575 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	SPC110	P32380	944 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	TSC10	P38342	320 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	PCA1	P38360	1216 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	SGM1	P47166	707 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	DIA3	P52290	468 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	COS10	P52924	374 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	RRT6	P53117	311 aa	Predicted RBP	2.79	□□□□□ -1.96
ASM4	YDL088C	SMM1	P53720	384 aa	Known RBP	2.79	□□□□□ -1.96
ASM4	YDL088C	RSM23	Q01163	450 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	YPL014W	Q02606	381 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	PSR1	Q07800	427 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	THI20	Q08224	551 aa		2.79	□□□□□ -1.96
ASM4	YDL088C	CAR1	P00812	333 aa	Known RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	RPL20A	P0CX23	172 aa	Known RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	RPL20B	P0CX24	172 aa	Predicted RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	ALY1	P36117	915 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	MTC4	P38335	694 aa	Known RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	YEL068C	P39977	110 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	RPS10B	P46784	105 aa	Known RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	YGL242C	P53066	181 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	ERG26	P53199	349 aa	Known RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	DUG3	P53871	357 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	YVH1	Q02256	364 aa	Known RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	YMR087W	Q04299	284 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	RPS10A	Q08745	105 aa	Predicted RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	LEU9	Q12166	604 aa	Known RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	LDB16	P25587	256 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	DBF20	P32328	564 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	TIF3	P34167	436 aa	Known RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	AGP2	P38090	596 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	FAA2	P39518	744 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	ELO1	P39540	310 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	NPR2	P39923	615 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	SLZ1	P40167	298 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	PYK2	P52489	506 aa	Known RBP	2.78	□□□□□ -1.96
ASM4	YDL088C	INA17	Q02888	182 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	TEN1	Q07921	160 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	TRM8	Q12009	286 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	AYT1	Q12226	474 aa		2.78	□□□□□ -1.96
ASM4	YDL088C	SSM4	P40318	1319 aa		2.77	□□□□□ -1.97
ASM4	YDL088C	VMA16	P23968	213 aa		2.77	□□□□□ -1.97
ASM4	YDL088C	RCO1	Q04779	684 aa		2.77	□□□□□ -1.97
ASM4	YDL088C	TFC6	Q06339	672 aa		2.77	□□□□□ -1.97
ASM4	YDL088C	MRP20	P32387	263 aa		2.76	□□□□□ -1.97
ASM4	YDL088C	VPS52	P39904	641 aa		2.76	□□□□□ -1.97
ASM4	YDL088C	CSM2	P40465	213 aa		2.76	□□□□□ -1.97
ASM4	YDL088C	PTR3	P43606	678 aa		2.76	□□□□□ -1.97
ASM4	YDL088C	SDH5	Q08230	162 aa		2.76	□□□□□ -1.97
ASM4	YDL088C	NBP2	Q12163	236 aa		2.76	□□□□□ -1.97
ASM4	YDL088C	SNF1	P06782	633 aa	Known RBP	2.75	□□□□□ -1.97
ASM4	YDL088C	RPB2	P08518	1224 aa	Known RBP	2.75	□□□□□ -1.97
ASM4	YDL088C	ADH7	P25377	361 aa		2.75	□□□□□ -1.97
ASM4	YDL088C	PDB1	P32473	366 aa	Known RBP	2.75	□□□□□ -1.97
ASM4	YDL088C	PTH2	P34222	208 aa		2.75	□□□□□ -1.97
ASM4	YDL088C	YNG2	P38806	282 aa	Known RBP	2.75	□□□□□ -1.97
ASM4	YDL088C	IDP2	P41939	412 aa		2.75	□□□□□ -1.97
ASM4	YDL088C	PIL1	P53252	339 aa	Known RBP	2.75	□□□□□ -1.97
ASM4	YDL088C	DPB4	Q04603	196 aa	Known RBP	2.75	□□□□□ -1.97
ASM4	YDL088C	VID22	Q05934	901 aa		2.75	□□□□□ -1.97
ASM4	YDL088C	APE1	P14904	514 aa		2.74	□□□□□ -1.97
ASM4	YDL088C	TUL1	P36096	758 aa		2.74	□□□□□ -1.97
ASM4	YDL088C	TIF5	P38431	405 aa	Known RBP	2.74	□□□□□ -1.97
ASM4	YDL088C	OSH3	P38713	996 aa	Known RBP	2.74	□□□□□ -1.97
ASM4	YDL088C	RHO4	Q00246	291 aa		2.74	□□□□□ -1.97
ASM4	YDL088C	RLI1	Q03195	608 aa	Known RBP	2.74	□□□□□ -1.97
ASM4	YDL088C	HEM2	P05373	342 aa		2.74	□□□□□ -1.97
ASM4	YDL088C	PWP1	P21304	576 aa	Known RBP	2.74	□□□□□ -1.97
ASM4	YDL088C	SLC1	P33333	303 aa		2.74	□□□□□ -1.97
ASM4	YDL088C	PMU1	P36069	295 aa		2.74	□□□□□ -1.97
ASM4	YDL088C	PSY4	P38193	441 aa		2.74	□□□□□ -1.97
ASM4	YDL088C	SAP185	P40856	1058 aa		2.74	□□□□□ -1.97
ASM4	YDL088C	WSC2	P53832	503 aa		2.74	□□□□□ -1.97
ASM4	YDL088C	SHR3	Q02774	210 aa		2.74	□□□□□ -1.97
ASM4	YDL088C	SAC6	P32599	642 aa	Known RBP	2.73	□□□□□ -1.97
ASM4	YDL088C	MTR2	P34232	184 aa	Known RBP	2.73	□□□□□ -1.97
ASM4	YDL088C	YKL100C	P34248	587 aa		2.73	□□□□□ -1.97
ASM4	YDL088C	ICS2	P38284	255 aa		2.73	□□□□□ -1.97
ASM4	YDL088C	SHO1	P40073	367 aa		2.73	□□□□□ -1.97
ASM4	YDL088C	SNG1	P46950	547 aa		2.73	□□□□□ -1.97
ASM4	YDL088C	BNA1	P47096	177 aa		2.73	□□□□□ -1.97
ASM4	YDL088C	INN1	P53901	409 aa		2.73	□□□□□ -1.97
ASM4	YDL088C	TCO89	Q08921	799 aa		2.73	□□□□□ -1.97
ASM4	YDL088C	PEP5	P12868	1029 aa		2.72	□□□□□ -1.97
ASM4	YDL088C	YKL023W	P36103	277 aa	Known RBP	2.72	□□□□□ -1.97
ASM4	YDL088C	YGR127W	P53275	312 aa		2.72	□□□□□ -1.97
ASM4	YDL088C	SNO4	Q04902	237 aa		2.72	□□□□□ -1.97
ASM4	YDL088C	HSP33	Q08914	237 aa	Known RBP	2.72	□□□□□ -1.97
ASM4	YDL088C	HSP32	Q08992	237 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms