RNA–Protein interactions for RNA: YDL036C

PUS9, Transcript of Mitochondrial tRNA:pseudouridine synthase, yeast

Gene PUS9, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS9	YDL036C	YCR006C	P25350	157 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	PRD1	P25375	712 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	SYN8	P31377	255 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	CMC1	P36064	111 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	HOT13	P36078	116 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	NUP133	P36161	1157 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	ARN1	P38731	627 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	PTR3	P43606	678 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	PET130	P47065	347 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	IPI3	P53877	555 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	PDR8	Q06149	701 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	TPO3	Q06451	622 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	RTT109	Q07794	436 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	MCH4	Q08268	501 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	YOL159C	Q08300	171 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	RLM1	Q12224	676 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	YLR111W	Q12528	110 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	YOL159C-A	Q3E769	90 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	MRP13	P12686	339 aa		4.59	□□□□□ -1.67
PUS9	YDL036C	KRS1	P15180	591 aa	Known RBP	4.59	□□□□□ -1.67
PUS9	YDL036C	ART10	P18634	518 aa	Known RBP	4.59	□□□□□ -1.67
PUS9	YDL036C	CLB2	P24869	491 aa		4.59	□□□□□ -1.67
PUS9	YDL036C	BOS1	P25385	244 aa		4.59	□□□□□ -1.67
PUS9	YDL036C	SEC66	P33754	206 aa		4.59	□□□□□ -1.67
PUS9	YDL036C	YBL055C	P34220	418 aa	Predicted RBP	4.59	□□□□□ -1.67
PUS9	YDL036C	ICS2	P38284	255 aa		4.59	□□□□□ -1.67
PUS9	YDL036C	YJL068C	P40363	299 aa		4.59	□□□□□ -1.67
PUS9	YDL036C	ULP2	P40537	1034 aa	Predicted RBP	4.59	□□□□□ -1.67
PUS9	YDL036C	HOS2	P53096	452 aa	Predicted RBP	4.59	□□□□□ -1.67
PUS9	YDL036C	ERG26	P53199	349 aa	Known RBP	4.59	□□□□□ -1.67
PUS9	YDL036C	SXM1	Q04175	944 aa	Known RBP	4.59	□□□□□ -1.67
PUS9	YDL036C	PIG1	Q06216	648 aa		4.59	□□□□□ -1.67
PUS9	YDL036C	IRC3	Q06683	689 aa		4.59	□□□□□ -1.67
PUS9	YDL036C	SEC39	Q12745	709 aa		4.59	□□□□□ -1.67
PUS9	YDL036C	SGS1	P35187	1447 aa		4.59	□□□□□ -1.67
PUS9	YDL036C	ADK2	P26364	225 aa		4.58	□□□□□ -1.68
PUS9	YDL036C	SAS3	P34218	831 aa		4.58	□□□□□ -1.68
PUS9	YDL036C	PXL1	P36166	706 aa		4.58	□□□□□ -1.68
PUS9	YDL036C	DBP8	P38719	431 aa		4.58	□□□□□ -1.68
PUS9	YDL036C	YJL107C	P42947	387 aa		4.58	□□□□□ -1.68
PUS9	YDL036C	RMT2	Q03305	412 aa		4.58	□□□□□ -1.68
PUS9	YDL036C	RPC11	Q04307	110 aa	Predicted RBP	4.58	□□□□□ -1.68
PUS9	YDL036C	EMI2	Q04409	500 aa	Known RBP	4.58	□□□□□ -1.68
PUS9	YDL036C	TEN1	Q07921	160 aa		4.58	□□□□□ -1.68
PUS9	YDL036C	ISA2	Q12425	185 aa		4.58	□□□□□ -1.68
PUS9	YDL036C	YER145C-A	A0A023PYF4	145 aa		4.57	□□□□□ -1.68
PUS9	YDL036C	ARG81	P05085	880 aa		4.57	□□□□□ -1.68
PUS9	YDL036C	BUD5	P25300	642 aa	Predicted RBP	4.57	□□□□□ -1.68
PUS9	YDL036C	PMT1	P33775	817 aa		4.57	□□□□□ -1.68
PUS9	YDL036C	YKL100C	P34248	587 aa		4.57	□□□□□ -1.68
PUS9	YDL036C	MIA40	P36046	403 aa		4.57	□□□□□ -1.68
PUS9	YDL036C	SSU1	P41930	458 aa		4.57	□□□□□ -1.68
PUS9	YDL036C	HXT14	P42833	540 aa		4.57	□□□□□ -1.68
PUS9	YDL036C	IRC7	P43623	340 aa		4.57	□□□□□ -1.68
PUS9	YDL036C	EAF7	P53911	425 aa	Known RBP	4.57	□□□□□ -1.68
PUS9	YDL036C	SWF1	Q04629	336 aa		4.57	□□□□□ -1.68
PUS9	YDL036C	HSP82	P02829	709 aa	Known RBP	4.56	□□□□□ -1.68
PUS9	YDL036C	CLC1	P17891	233 aa		4.56	□□□□□ -1.68
PUS9	YDL036C	REC107	P21651	314 aa		4.56	□□□□□ -1.68
PUS9	YDL036C	CDC60	P26637	1090 aa	Known RBP	4.56	□□□□□ -1.68
PUS9	YDL036C	LRP1	P38801	184 aa	Known RBP	4.56	□□□□□ -1.68
PUS9	YDL036C	CIN4	P39110	191 aa		4.56	□□□□□ -1.68
PUS9	YDL036C	PSA1	P41940	361 aa	Known RBP	4.56	□□□□□ -1.68
PUS9	YDL036C	UBP8	P50102	471 aa		4.56	□□□□□ -1.68
PUS9	YDL036C	YTP1	P53584	459 aa		4.56	□□□□□ -1.68
PUS9	YDL036C	ATP23	P53722	227 aa		4.56	□□□□□ -1.68
PUS9	YDL036C	ASI1	P54074	624 aa		4.56	□□□□□ -1.68
PUS9	YDL036C	CDC45	Q08032	650 aa		4.56	□□□□□ -1.68
PUS9	YDL036C	GAC1	P28006	793 aa		4.55	□□□□□ -1.68
PUS9	YDL036C	YME1	P32795	747 aa		4.55	□□□□□ -1.68
PUS9	YDL036C	MSR1	P38714	643 aa		4.55	□□□□□ -1.68
PUS9	YDL036C	ANS1	P38832	159 aa		4.55	□□□□□ -1.68
PUS9	YDL036C	LYS20	P48570	428 aa	Known RBP	4.55	□□□□□ -1.68
PUS9	YDL036C	RCF1	Q03713	159 aa		4.55	□□□□□ -1.68
PUS9	YDL036C	ORM2	Q06144	216 aa		4.55	□□□□□ -1.68
PUS9	YDL036C	VTA1	Q06263	330 aa		4.55	□□□□□ -1.68
PUS9	YDL036C	ECM30	Q06673	1274 aa		4.55	□□□□□ -1.68
PUS9	YDL036C	YRF1-4	O13559	1382 aa		4.55	□□□□□ -1.68
PUS9	YDL036C	PUT2	P07275	575 aa		4.54	□□□□□ -1.68
PUS9	YDL036C	YCR051W	P25631	222 aa		4.54	□□□□□ -1.68
PUS9	YDL036C	PAP1	P29468	568 aa	Known RBP	4.54	□□□□□ -1.68
PUS9	YDL036C	GCS1	P35197	352 aa		4.54	□□□□□ -1.68
PUS9	YDL036C	STB6	P36085	766 aa		4.54	□□□□□ -1.68
PUS9	YDL036C	RPL32	P38061	130 aa	Known RBP	4.54	□□□□□ -1.68
PUS9	YDL036C	SGF73	P53165	657 aa		4.54	□□□□□ -1.68
PUS9	YDL036C	VPS9	P54787	451 aa		4.54	□□□□□ -1.68
PUS9	YDL036C	RPA49	Q01080	415 aa	Predicted RBP	4.54	□□□□□ -1.68
PUS9	YDL036C	MSC1	Q03104	513 aa		4.54	□□□□□ -1.68
PUS9	YDL036C	ERB1	Q04660	807 aa	Known RBP	4.54	□□□□□ -1.68
PUS9	YDL036C	YLR345W	Q06137	509 aa		4.54	□□□□□ -1.68
PUS9	YDL036C	ATG26	Q06321	1198 aa		4.54	□□□□□ -1.68
PUS9	YDL036C	RPS10A	Q08745	105 aa	Predicted RBP	4.54	□□□□□ -1.68
PUS9	YDL036C	YDL007C-A	Q2V2Q0	85 aa		4.54	□□□□□ -1.68
PUS9	YDL036C	PMS1	P14242	873 aa		4.53	□□□□□ -1.68
PUS9	YDL036C	URE2	P23202	354 aa	Known RBP	4.53	□□□□□ -1.68
PUS9	YDL036C	VPS41	P38959	992 aa		4.53	□□□□□ -1.68
PUS9	YDL036C	DLD2	P46681	530 aa	Known RBP	4.53	□□□□□ -1.68
PUS9	YDL036C	RPS10B	P46784	105 aa	Known RBP	4.53	□□□□□ -1.68
PUS9	YDL036C	NMD5	P46970	1048 aa		4.53	□□□□□ -1.68
PUS9	YDL036C	RSM23	Q01163	450 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms