RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC1	YDL006W	IRC7	P43623	340 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	PIL1	P53252	339 aa	Known RBP	4.79	□□□□□ -1.64
PTC1	YDL006W	IST1	P53843	298 aa	Predicted RBP	4.79	□□□□□ -1.64
PTC1	YDL006W	IDP3	P53982	420 aa	Known RBP	4.79	□□□□□ -1.64
PTC1	YDL006W	INA17	Q02888	182 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	GPN2	Q08726	347 aa	Predicted RBP	4.79	□□□□□ -1.64
PTC1	YDL006W	KEL3	Q08979	651 aa	Predicted RBP	4.79	□□□□□ -1.64
PTC1	YDL006W	YOR019W	Q99248	730 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	HKR1	P41809	1802 aa		4.79	□□□□□ -1.64
PTC1	YDL006W	FLO11	P08640	1367 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	YBR085C-A	O43137	85 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	RPL19A	P0CX82	189 aa	Known RBP	4.78	□□□□□ -1.64
PTC1	YDL006W	RPL19B	P0CX83	189 aa	Predicted RBP	4.78	□□□□□ -1.64
PTC1	YDL006W	HSC82	P15108	705 aa	Known RBP	4.78	□□□□□ -1.64
PTC1	YDL006W	HPR1	P17629	752 aa	Known RBP	4.78	□□□□□ -1.64
PTC1	YDL006W	SAC6	P32599	642 aa	Known RBP	4.78	□□□□□ -1.64
PTC1	YDL006W	STV1	P37296	890 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	ECM10	P39987	644 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	YGR117C	P53270	476 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	YPR003C	P53394	754 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	EAF7	P53911	425 aa	Known RBP	4.78	□□□□□ -1.64
PTC1	YDL006W	RSM28	Q03430	361 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	RIM13	Q03792	727 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	SKG3	Q06315	1026 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	FRE7	Q12333	620 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	RAD61	Q99359	647 aa		4.78	□□□□□ -1.64
PTC1	YDL006W	CBP1	P07252	654 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	NUP1	P20676	1076 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	PDB1	P32473	366 aa	Known RBP	4.77	□□□□□ -1.65
PTC1	YDL006W	ANP1	P32629	500 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	OCT1	P35999	772 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	MUD2	P36084	527 aa	Known RBP	4.77	□□□□□ -1.65
PTC1	YDL006W	ADE17	P38009	592 aa	Known RBP	4.77	□□□□□ -1.65
PTC1	YDL006W	OPY1	P38271	328 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	ARN1	P38731	627 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	ULP2	P40537	1034 aa	Predicted RBP	4.77	□□□□□ -1.65
PTC1	YDL006W	YJL107C	P42947	387 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	CTK2	P46962	323 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	INN1	P53901	409 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	ERG13	P54839	491 aa	Known RBP	4.77	□□□□□ -1.65
PTC1	YDL006W	VPS20	Q04272	221 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	YOR111W	Q99210	232 aa		4.77	□□□□□ -1.65
PTC1	YDL006W	HXK2	P04807	486 aa	Known RBP	4.76	□□□□□ -1.65
PTC1	YDL006W	COQ3	P27680	312 aa		4.76	□□□□□ -1.65
PTC1	YDL006W	NOP4	P37838	685 aa	Known RBP	4.76	□□□□□ -1.65
PTC1	YDL006W	UBP13	P38187	747 aa		4.76	□□□□□ -1.65
PTC1	YDL006W	YBL028C	P38202	106 aa		4.76	□□□□□ -1.65
PTC1	YDL006W	UIP3	P39547	235 aa		4.76	□□□□□ -1.65
PTC1	YDL006W	YEL068C	P39977	110 aa		4.76	□□□□□ -1.65
PTC1	YDL006W	SEC24	P40482	926 aa	Known RBP	4.76	□□□□□ -1.65
PTC1	YDL006W	PKP1	P40530	394 aa		4.76	□□□□□ -1.65
PTC1	YDL006W	YSA1	Q01976	231 aa		4.76	□□□□□ -1.65
PTC1	YDL006W	VTC3	Q02725	835 aa		4.76	□□□□□ -1.65
PTC1	YDL006W	THI7	Q05998	598 aa		4.76	□□□□□ -1.65
PTC1	YDL006W	YLR455W	Q06188	304 aa		4.76	□□□□□ -1.65
PTC1	YDL006W	YLR278C	Q05854	1341 aa		4.75	□□□□□ -1.65
PTC1	YDL006W	MATALPHA2	P0CY08	210 aa		4.75	□□□□□ -1.65
PTC1	YDL006W	HMLALPHA2	P0CY09	210 aa		4.75	□□□□□ -1.65
PTC1	YDL006W	CST26	P38226	397 aa		4.75	□□□□□ -1.65
PTC1	YDL006W	UPF3	P48412	387 aa	Known RBP	4.75	□□□□□ -1.65
PTC1	YDL006W	LGE1	Q02796	332 aa	Known RBP	4.75	□□□□□ -1.65
PTC1	YDL006W	RSC9	Q03124	581 aa		4.75	□□□□□ -1.65
PTC1	YDL006W	PIG1	Q06216	648 aa		4.75	□□□□□ -1.65
PTC1	YDL006W	ENT4	Q07872	247 aa		4.75	□□□□□ -1.65
PTC1	YDL006W	MCH4	Q08268	501 aa		4.75	□□□□□ -1.65
PTC1	YDL006W	LSP1	Q12230	341 aa	Known RBP	4.75	□□□□□ -1.65
PTC1	YDL006W	FLO1	P32768	1537 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	SAN1	P22470	610 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	MAK31	P23059	88 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	MYO3	P36006	1272 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	DIA4	P38705	446 aa	Predicted RBP	4.74	□□□□□ -1.65
PTC1	YDL006W	PES4	P39684	611 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	PSA1	P41940	361 aa	Known RBP	4.74	□□□□□ -1.65
PTC1	YDL006W	EPL1	P43572	832 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	DPB11	P47027	764 aa	Predicted RBP	4.74	□□□□□ -1.65
PTC1	YDL006W	SMC3	P47037	1230 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	BNA3	P47039	444 aa	Known RBP	4.74	□□□□□ -1.65
PTC1	YDL006W	RPT6	Q01939	405 aa	Known RBP	4.74	□□□□□ -1.65
PTC1	YDL006W	RAD30	Q04049	632 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	SWF1	Q04629	336 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	PDR8	Q06149	701 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	PSR1	Q07800	427 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	YLR049C	Q12110	428 aa		4.74	□□□□□ -1.65
PTC1	YDL006W	NOP58	Q12499	511 aa	Known RBP	4.74	□□□□□ -1.65
PTC1	YDL006W	PET111	P08468	800 aa		4.73	□□□□□ -1.65
PTC1	YDL006W	GPA1	P08539	472 aa		4.73	□□□□□ -1.65
PTC1	YDL006W	AAC3	P18238	307 aa		4.73	□□□□□ -1.65
PTC1	YDL006W	PRO3	P32263	286 aa	Known RBP	4.73	□□□□□ -1.65
PTC1	YDL006W	IME2	P32581	645 aa		4.73	□□□□□ -1.65
PTC1	YDL006W	PRX1	P34227	261 aa	Known RBP	4.73	□□□□□ -1.65
PTC1	YDL006W	AGP2	P38090	596 aa		4.73	□□□□□ -1.65
PTC1	YDL006W	TOM71	P38825	639 aa	Known RBP	4.73	□□□□□ -1.65
PTC1	YDL006W	KEL1	P38853	1164 aa	Known RBP	4.73	□□□□□ -1.65
PTC1	YDL006W	CSM2	P40465	213 aa		4.73	□□□□□ -1.65
PTC1	YDL006W	CFD1	P40558	293 aa		4.73	□□□□□ -1.65
PTC1	YDL006W	LYS14	P40971	790 aa		4.73	□□□□□ -1.65
PTC1	YDL006W	COP1	P53622	1201 aa	Known RBP	4.73	□□□□□ -1.65
PTC1	YDL006W	COG4	Q06096	861 aa		4.73	□□□□□ -1.65
PTC1	YDL006W	HSP82	P02829	709 aa	Known RBP	4.72	□□□□□ -1.65
PTC1	YDL006W	STE50	P25344	346 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms