RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	RRP1	P35178	278 aa	Predicted RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	MRPL37	P36532	105 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	MUP3	P38734	546 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	BZZ1	P38822	633 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	WSS1	P38838	269 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	YER085C	P40058	173 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	YER137C	P40083	148 aa	Known RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	SHQ1	P40486	507 aa	Predicted RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	LYS14	P40971	790 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	TMA22	P47089	198 aa	Predicted RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	HAM1	P47119	197 aa	Known RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	ASK10	P48361	1146 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	YGL117W	P53133	265 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	TIM21	P53220	239 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	BET4	Q00618	327 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	RPT6	Q01939	405 aa	Known RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	SRL4	Q03085	281 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	YLR173W	Q06247	608 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	ARO10	Q06408	635 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	HBT1	Q07653	1046 aa	Known RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	SIL1	Q08199	421 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	NGL1	Q08213	363 aa	Known RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	ULA1	Q12059	462 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	MRPL23	Q12487	163 aa	Predicted RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	RAD61	Q99359	647 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	HIR3	P47171	1648 aa		4.15	□□□□□ -1.74
HCM1	YCR065W	YLR415C	O13578	112 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	NUC1	P08466	329 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	SSC1	P0CS90	654 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	DAP2	P18962	818 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	UBC1	P21734	215 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	PMI40	P29952	429 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	HCS1	P34243	683 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	YKL063C	P35725	167 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	AKL1	P38080	1108 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	EGD2	P38879	174 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	ECM1	P39715	212 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	YEL025C	P39991	1188 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	PCL6	P40038	420 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	LRO1	P40345	661 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	FKH2	P41813	862 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	NET1	P47035	1189 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	COX16	P47081	118 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	MRK1	P50873	501 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	RRT6	P53117	311 aa	Predicted RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	LSG1	P53145	640 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	SUN4	P53616	420 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	CPR6	P53691	371 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	VPS75	P53853	264 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	GPD1	Q00055	391 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	ECM9	Q02202	377 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	IRC4	Q03036	179 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	EFR3	Q03653	782 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	YEH2	Q07950	538 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	YLR040C	Q07988	224 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	PUS9	Q12069	462 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	LEU9	Q12166	604 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	RPN5	Q12250	445 aa	Known RBP	4.15	□□□□□ -1.75
HCM1	YCR065W	YOL159C-A	Q3E769	90 aa		4.15	□□□□□ -1.75
HCM1	YCR065W	REV3	P14284	1504 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	ARO3	P14843	370 aa	Known RBP	4.14	□□□□□ -1.75
HCM1	YCR065W	KGD1	P20967	1014 aa	Known RBP	4.14	□□□□□ -1.75
HCM1	YCR065W	APA2	P22108	325 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	BUD5	P25300	642 aa	Predicted RBP	4.14	□□□□□ -1.75
HCM1	YCR065W	CCR4	P31384	837 aa	Known RBP	4.14	□□□□□ -1.75
HCM1	YCR065W	SER1	P33330	395 aa	Known RBP	4.14	□□□□□ -1.75
HCM1	YCR065W	TRM2	P33753	639 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	PMT1	P33775	817 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	UTP11	P34247	250 aa	Predicted RBP	4.14	□□□□□ -1.75
HCM1	YCR065W	SSU1	P41930	458 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	OTU1	P43558	301 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	GLG2	P47011	380 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	ALT2	P52892	507 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	SLX9	P53251	210 aa	Predicted RBP	4.14	□□□□□ -1.75
HCM1	YCR065W	LEE1	Q02799	301 aa	Known RBP	4.14	□□□□□ -1.75
HCM1	YCR065W	KAP120	Q02932	1032 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	MRPL1	Q04599	285 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	DCS1	Q06151	350 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	YPD1	Q07688	167 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	SWT1	Q12104	458 aa		4.14	□□□□□ -1.75
HCM1	YCR065W	TUB2	P02557	457 aa	Known RBP	4.13	□□□□□ -1.75
HCM1	YCR065W	SSA3	P09435	649 aa	Known RBP	4.13	□□□□□ -1.75
HCM1	YCR065W	SAM1	P10659	382 aa	Known RBP	4.13	□□□□□ -1.75
HCM1	YCR065W	EST1	P17214	699 aa	Predicted RBP	4.13	□□□□□ -1.75
HCM1	YCR065W	VPS1	P21576	704 aa	Known RBP	4.13	□□□□□ -1.75
HCM1	YCR065W	CPR2	P23285	205 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	SIN4	P32259	974 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	HXT4	P32467	576 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	YME2	P32843	850 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	PRS1	P32895	427 aa	Known RBP	4.13	□□□□□ -1.75
HCM1	YCR065W	KKQ8	P36004	724 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	CAF4	P36130	643 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	BMT2	P38278	337 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	LYS9	P38999	446 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	PRP31	P49704	494 aa	Predicted RBP	4.13	□□□□□ -1.75
HCM1	YCR065W	CUE3	P53137	624 aa	Known RBP	4.13	□□□□□ -1.75
HCM1	YCR065W	YGR117C	P53270	476 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	COG2	P53271	262 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	MRS2	Q01926	470 aa		4.13	□□□□□ -1.75
HCM1	YCR065W	FMP30	Q02883	468 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms