RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B CAR1P00812 333 aaKnown RBP1.72□□□□□ -2.13
HTL1YCR020W-B ARG81P05085 880 aa1.72□□□□□ -2.13
HTL1YCR020W-B ERG8P24521 451 aa1.72□□□□□ -2.13
HTL1YCR020W-B RER1P25560 188 aa1.72□□□□□ -2.13
HTL1YCR020W-B RAD16P31244 790 aa1.72□□□□□ -2.13
HTL1YCR020W-B HXT1P32465 570 aa1.72□□□□□ -2.13
HTL1YCR020W-B PMU1P36069 295 aa1.72□□□□□ -2.13
HTL1YCR020W-B DBP8P38719 431 aa1.72□□□□□ -2.13
HTL1YCR020W-B RPS10BP46784 105 aaKnown RBP1.72□□□□□ -2.13
HTL1YCR020W-B SMM1P53720 384 aaKnown RBP1.72□□□□□ -2.13
HTL1YCR020W-B HEL2Q05580 639 aaKnown RBP1.72□□□□□ -2.13
HTL1YCR020W-B ECM30Q06673 1274 aa1.72□□□□□ -2.13
HTL1YCR020W-B YOR387CQ08910 206 aa1.72□□□□□ -2.13
HTL1YCR020W-B YBR085C-AO43137 85 aa1.71□□□□□ -2.14
HTL1YCR020W-B PMR1P13586 950 aa1.71□□□□□ -2.14
HTL1YCR020W-B PHO81P17442 1178 aa1.71□□□□□ -2.14
HTL1YCR020W-B YCR022CP25620 114 aa1.71□□□□□ -2.14
HTL1YCR020W-B FUN19P28003 413 aaPredicted RBP1.71□□□□□ -2.14
HTL1YCR020W-B DEG1P31115 442 aaKnown RBP1.71□□□□□ -2.14
HTL1YCR020W-B SAC6P32599 642 aaKnown RBP1.71□□□□□ -2.14
HTL1YCR020W-B YHL041WP38730 149 aa1.71□□□□□ -2.14
HTL1YCR020W-B SEC24P40482 926 aaKnown RBP1.71□□□□□ -2.14
HTL1YCR020W-B IME4P41833 600 aa1.71□□□□□ -2.14
HTL1YCR020W-B HNT3Q08702 217 aa1.71□□□□□ -2.14
HTL1YCR020W-B RPS10AQ08745 105 aaPredicted RBP1.71□□□□□ -2.14
HTL1YCR020W-B PUT2P07275 575 aa1.7□□□□□ -2.14
HTL1YCR020W-B APE1P14904 514 aa1.7□□□□□ -2.14
HTL1YCR020W-B NAM9P27929 486 aa1.7□□□□□ -2.14
HTL1YCR020W-B SNU114P36048 1008 aaKnown RBP1.7□□□□□ -2.14
HTL1YCR020W-B GRX7P38068 203 aa1.7□□□□□ -2.14
HTL1YCR020W-B IFA38P38286 347 aa1.7□□□□□ -2.14
HTL1YCR020W-B OSH3P38713 996 aaKnown RBP1.7□□□□□ -2.14
HTL1YCR020W-B NDT80P38830 627 aa1.7□□□□□ -2.14
HTL1YCR020W-B PSD1P39006 500 aa1.7□□□□□ -2.14
HTL1YCR020W-B SHO1P40073 367 aa1.7□□□□□ -2.14
HTL1YCR020W-B TIS11P47977 285 aa1.7□□□□□ -2.14
HTL1YCR020W-B PYK2P52489 506 aaKnown RBP1.7□□□□□ -2.14
HTL1YCR020W-B SDT1P53078 280 aa1.7□□□□□ -2.14
HTL1YCR020W-B YNR061CP53747 219 aa1.7□□□□□ -2.14
HTL1YCR020W-B DUG3P53871 357 aa1.7□□□□□ -2.14
HTL1YCR020W-B ZDS2P54786 942 aa1.7□□□□□ -2.14
HTL1YCR020W-B RSM23Q01163 450 aa1.7□□□□□ -2.14
HTL1YCR020W-B MRPL13Q02204 264 aa1.7□□□□□ -2.14
HTL1YCR020W-B YVH1Q02256 364 aaKnown RBP1.7□□□□□ -2.14
HTL1YCR020W-B VCX1Q99385 411 aa1.7□□□□□ -2.14
HTL1YCR020W-B PFK2P16862 959 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
HTL1YCR020W-B YCL049CP25577 312 aa1.69□□□□□ -2.14
HTL1YCR020W-B TSC10P38342 320 aa1.69□□□□□ -2.14
HTL1YCR020W-B UIP3P39547 235 aa1.69□□□□□ -2.14
HTL1YCR020W-B CSM2P40465 213 aa1.69□□□□□ -2.14
HTL1YCR020W-B NUS1Q12063 375 aa1.69□□□□□ -2.14
HTL1YCR020W-B YER078W-AQ3E7A2 54 aa1.69□□□□□ -2.14
HTL1YCR020W-B YLR302CO13544 120 aa1.68□□□□□ -2.14
HTL1YCR020W-B ATR1P13090 542 aa1.68□□□□□ -2.14
HTL1YCR020W-B CPR1P14832 162 aaKnown RBP1.68□□□□□ -2.14
HTL1YCR020W-B YEF3P16521 1044 aaKnown RBP1.68□□□□□ -2.14
HTL1YCR020W-B KTR3P38130 404 aaPredicted RBP1.68□□□□□ -2.14
HTL1YCR020W-B ALG8P40351 577 aa1.68□□□□□ -2.14
HTL1YCR020W-B RPS7BP48164 190 aaKnown RBP1.68□□□□□ -2.14
HTL1YCR020W-B ERG26P53199 349 aaKnown RBP1.68□□□□□ -2.14
HTL1YCR020W-B MSO1P53604 210 aaKnown RBP1.68□□□□□ -2.14
HTL1YCR020W-B ARC35P53731 342 aaKnown RBP1.68□□□□□ -2.14
HTL1YCR020W-B INN1P53901 409 aa1.68□□□□□ -2.14
HTL1YCR020W-B SYO1Q07395 620 aa1.68□□□□□ -2.14
HTL1YCR020W-B ENT4Q07872 247 aa1.68□□□□□ -2.14
HTL1YCR020W-B PSK2Q08217 1101 aa1.68□□□□□ -2.14
HTL1YCR020W-B NYV1Q12255 253 aa1.68□□□□□ -2.14
HTL1YCR020W-B SPT15P13393 240 aaKnown RBP1.67□□□□□ -2.14
HTL1YCR020W-B SGV1P23293 657 aaKnown RBP1.67□□□□□ -2.14
HTL1YCR020W-B CBF2P32504 956 aa1.67□□□□□ -2.14
HTL1YCR020W-B YME1P32795 747 aa1.67□□□□□ -2.14
HTL1YCR020W-B PAD1P33751 242 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
HTL1YCR020W-B YBL059WP34224 193 aa1.67□□□□□ -2.14
HTL1YCR020W-B RFS1P38234 210 aaKnown RBP1.67□□□□□ -2.14
HTL1YCR020W-B DIA4P38705 446 aaPredicted RBP1.67□□□□□ -2.14
HTL1YCR020W-B ELO1P39540 310 aa1.67□□□□□ -2.14
HTL1YCR020W-B SGM1P47166 707 aa1.67□□□□□ -2.14
HTL1YCR020W-B YGL039WP53183 348 aaKnown RBP1.67□□□□□ -2.14
HTL1YCR020W-B BTN2P53286 410 aa1.67□□□□□ -2.14
HTL1YCR020W-B RHO4Q00246 291 aa1.67□□□□□ -2.14
HTL1YCR020W-B SHR3Q02774 210 aa1.67□□□□□ -2.14
HTL1YCR020W-B MHR1Q06630 226 aa1.67□□□□□ -2.14
HTL1YCR020W-B TEN1Q07921 160 aa1.67□□□□□ -2.14
HTL1YCR020W-B YDL009CQ12210 107 aa1.67□□□□□ -2.14
HTL1YCR020W-B SOD1P00445 154 aaKnown RBP1.66□□□□□ -2.14
HTL1YCR020W-B NAT1P12945 854 aaKnown RBP1.66□□□□□ -2.14
HTL1YCR020W-B AMD1P15274 810 aaKnown RBP1.66□□□□□ -2.14
HTL1YCR020W-B UBC1P21734 215 aaKnown RBP1.66□□□□□ -2.14
HTL1YCR020W-B YIM1P28625 365 aa1.66□□□□□ -2.14
HTL1YCR020W-B TEF4P36008 412 aaKnown RBP1.66□□□□□ -2.14
HTL1YCR020W-B DIA3P52290 468 aa1.66□□□□□ -2.14
HTL1YCR020W-B VPS4P52917 437 aa1.66□□□□□ -2.14
HTL1YCR020W-B BUD32P53323 261 aa1.66□□□□□ -2.14
HTL1YCR020W-B MRPL51Q06090 140 aaPredicted RBP1.66□□□□□ -2.14
HTL1YCR020W-B SKG3Q06315 1026 aa1.66□□□□□ -2.14
HTL1YCR020W-B SDH5Q08230 162 aa1.66□□□□□ -2.14
HTL1YCR020W-B LEU9Q12166 604 aaKnown RBP1.66□□□□□ -2.14
HTL1YCR020W-B NKP1Q12493 238 aa1.66□□□□□ -2.14
HTL1YCR020W-B CTF3Q12748 733 aa1.66□□□□□ -2.14
HTL1YCR020W-B RRP12Q12754 1228 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms