RNA–Protein interactions for RNA: YBR204C

LDH1, Transcript of Serine hydrolase, yeast

Gene LDH1, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDH1	YBR204C	UBA4	P38820	440 aa		4.13	□□□□□ -1.75
LDH1	YBR204C	PCL6	P40038	420 aa		4.13	□□□□□ -1.75
LDH1	YBR204C	YIR016W	P40572	265 aa		4.13	□□□□□ -1.75
LDH1	YBR204C	RPS10B	P46784	105 aa	Known RBP	4.13	□□□□□ -1.75
LDH1	YBR204C	VID30	P53076	958 aa		4.13	□□□□□ -1.75
LDH1	YBR204C	YGR066C	P53242	292 aa		4.13	□□□□□ -1.75
LDH1	YBR204C	MDM1	Q01846	1127 aa		4.13	□□□□□ -1.75
LDH1	YBR204C	IZH1	Q03419	316 aa		4.13	□□□□□ -1.75
LDH1	YBR204C	RPS10A	Q08745	105 aa	Predicted RBP	4.13	□□□□□ -1.75
LDH1	YBR204C	BUD7	Q08754	746 aa		4.13	□□□□□ -1.75
LDH1	YBR204C	YJR112W-A	Q3E743	109 aa		4.13	□□□□□ -1.75
LDH1	YBR204C	CBP1	P07252	654 aa		4.12	□□□□□ -1.75
LDH1	YBR204C	RPL42A	P0CX27	106 aa	Known RBP	4.12	□□□□□ -1.75
LDH1	YBR204C	RPL42B	P0CX28	106 aa	Known RBP	4.12	□□□□□ -1.75
LDH1	YBR204C	BUD5	P25300	642 aa	Predicted RBP	4.12	□□□□□ -1.75
LDH1	YBR204C	IMG1	P25626	169 aa		4.12	□□□□□ -1.75
LDH1	YBR204C	YKL100C	P34248	587 aa		4.12	□□□□□ -1.75
LDH1	YBR204C	REG2	P38232	338 aa		4.12	□□□□□ -1.75
LDH1	YBR204C	PHO90	P39535	881 aa		4.12	□□□□□ -1.75
LDH1	YBR204C	PTR3	P43606	678 aa		4.12	□□□□□ -1.75
LDH1	YBR204C	ECM30	Q06673	1274 aa		4.12	□□□□□ -1.75
LDH1	YBR204C	YDL218W	Q07629	317 aa		4.12	□□□□□ -1.75
LDH1	YBR204C	UBX3	Q12229	455 aa		4.12	□□□□□ -1.75
LDH1	YBR204C	INH1	P01097	85 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	CDC31	P06704	161 aa	Known RBP	4.11	□□□□□ -1.75
LDH1	YBR204C	OCA4	P25366	362 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	BOS1	P25385	244 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	TIF3	P34167	436 aa	Known RBP	4.11	□□□□□ -1.75
LDH1	YBR204C	ICS2	P38284	255 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	IRC6	P43615	237 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	PYK2	P52489	506 aa	Known RBP	4.11	□□□□□ -1.75
LDH1	YBR204C	PKP2	P53170	491 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	LSC1	P53598	329 aa	Known RBP	4.11	□□□□□ -1.75
LDH1	YBR204C	YNL234W	P53857	426 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	YNL181W	P53878	407 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	RSM23	Q01163	450 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	MLH2	Q07980	695 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	TAH18	Q12181	623 aa		4.11	□□□□□ -1.75
LDH1	YBR204C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
LDH1	YBR204C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
LDH1	YBR204C	SNF3	P10870	884 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	EST1	P17214	699 aa	Predicted RBP	4.1	□□□□□ -1.75
LDH1	YBR204C	SEF1	P34228	1148 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	UBP11	P36026	717 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	YPK3	P38070	525 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	SRO77	P38163	1010 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	SPO22	P40511	975 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
LDH1	YBR204C	RMD8	P43620	662 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	HOS2	P53096	452 aa	Predicted RBP	4.1	□□□□□ -1.75
LDH1	YBR204C	ESBP6	P53918	673 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	RPT6	Q01939	405 aa	Known RBP	4.1	□□□□□ -1.75
LDH1	YBR204C	MSC1	Q03104	513 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	EKI1	Q03764	534 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	DSE3	Q08729	430 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	SGS1	P35187	1447 aa		4.1	□□□□□ -1.75
LDH1	YBR204C	ARG3	P05150	338 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	MRP13	P12686	339 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	ART10	P18634	518 aa	Known RBP	4.09	□□□□□ -1.75
LDH1	YBR204C	ATO2	P32907	282 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	MTR2	P34232	184 aa	Known RBP	4.09	□□□□□ -1.75
LDH1	YBR204C	RPL32	P38061	130 aa	Known RBP	4.09	□□□□□ -1.75
LDH1	YBR204C	ALG5	P40350	334 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	YIL152W	P40455	235 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	MET28	P40573	187 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	ARF3	P40994	183 aa	RIP-Chip data	4.09	□□□□□ -1.75	not detected
LDH1	YBR204C	IAH1	P41734	238 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	MAF1	P41910	395 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	SRB7	P47822	140 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	SOL4	P53315	255 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	BOP3	P53958	396 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	VPS38	Q05919	439 aa		4.09	□□□□□ -1.75
LDH1	YBR204C	YFL068W	P0CX99	160 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	YLL066W-A	P0CY00	160 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	YLL067W-A	P0CY01	160 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	GID7	P25569	745 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	PDR3	P33200	976 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	TCD2	P36101	447 aa	Known RBP	4.08	□□□□□ -1.76
LDH1	YBR204C	UTP9	P38882	575 aa	Known RBP	4.08	□□□□□ -1.76
LDH1	YBR204C	CIN4	P39110	191 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	YEL057C	P39983	233 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	RTS2	P40962	232 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	IMD4	P50094	524 aa	Known RBP	4.08	□□□□□ -1.76
LDH1	YBR204C	IPI3	P53877	555 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	BET4	Q00618	327 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	NUP100	Q02629	959 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	NUP53	Q03790	475 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	FIN1	Q03898	291 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	RDR1	Q08904	546 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	AVL9	Q12500	764 aa		4.08	□□□□□ -1.76
LDH1	YBR204C	PDA1	P16387	420 aa	Known RBP	4.07	□□□□□ -1.76
LDH1	YBR204C	JNM1	P36224	373 aa		4.07	□□□□□ -1.76
LDH1	YBR204C	EFM2	P38347	419 aa		4.07	□□□□□ -1.76
LDH1	YBR204C	MRPL19	P53875	158 aa		4.07	□□□□□ -1.76
LDH1	YBR204C	TAF11	Q04226	346 aa		4.07	□□□□□ -1.76
LDH1	YBR204C	RPC11	Q04307	110 aa	Predicted RBP	4.07	□□□□□ -1.76
LDH1	YBR204C	RSF1	Q05043	376 aa		4.07	□□□□□ -1.76
LDH1	YBR204C	RLM1	Q12224	676 aa		4.07	□□□□□ -1.76
LDH1	YBR204C	GAL80	P04387	435 aa		4.06	□□□□□ -1.76
LDH1	YBR204C	CKA1	P15790	372 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms