RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W APE1P14904 514 aa2.19□□□□□ -2.06
SNC1YAL030W TPM1P17536 199 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W SUI2P20459 304 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W KGD1P20967 1014 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W SPO11P23179 398 aa2.19□□□□□ -2.06
SNC1YAL030W CPR2P23285 205 aa2.19□□□□□ -2.06
SNC1YAL030W ILV6P25605 309 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W ADY2P25613 283 aa2.19□□□□□ -2.06
SNC1YAL030W MSS51P32335 436 aa2.19□□□□□ -2.06
SNC1YAL030W VPH1P32563 840 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W ECM32P32644 1121 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W MSR1P38714 643 aa2.19□□□□□ -2.06
SNC1YAL030W DBP8P38719 431 aa2.19□□□□□ -2.06
SNC1YAL030W ARN1P38731 627 aa2.19□□□□□ -2.06
SNC1YAL030W ERV46P39727 415 aa2.19□□□□□ -2.06
SNC1YAL030W VMA13P41807 478 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W MAF1P41910 395 aa2.19□□□□□ -2.06
SNC1YAL030W QRI1P43123 477 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W CAK1P43568 368 aaPredicted RBP2.19□□□□□ -2.06
SNC1YAL030W PTR3P43606 678 aa2.19□□□□□ -2.06
SNC1YAL030W STU2P46675 888 aa2.19□□□□□ -2.06
SNC1YAL030W STB2P46679 850 aa2.19□□□□□ -2.06
SNC1YAL030W LYS20P48570 428 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W SLI1P53304 468 aa2.19□□□□□ -2.06
SNC1YAL030W BNI5P53890 448 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W EAF7P53911 425 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W MSC1Q03104 513 aa2.19□□□□□ -2.06
SNC1YAL030W PFA5Q03289 374 aa2.19□□□□□ -2.06
SNC1YAL030W AIM32Q04689 311 aa2.19□□□□□ -2.06
SNC1YAL030W PIG1Q06216 648 aa2.19□□□□□ -2.06
SNC1YAL030W ARO10Q06408 635 aa2.19□□□□□ -2.06
SNC1YAL030W IRC3Q06683 689 aa2.19□□□□□ -2.06
SNC1YAL030W TEN1Q07921 160 aa2.19□□□□□ -2.06
SNC1YAL030W MCH4Q08268 501 aa2.19□□□□□ -2.06
SNC1YAL030W YLR049CQ12110 428 aa2.19□□□□□ -2.06
SNC1YAL030W PNS1Q12412 539 aa2.19□□□□□ -2.06
SNC1YAL030W PDH1Q12428 516 aaKnown RBP2.19□□□□□ -2.06
SNC1YAL030W ARG81P05085 880 aa2.18□□□□□ -2.06
SNC1YAL030W CBP1P07252 654 aa2.18□□□□□ -2.06
SNC1YAL030W PUT2P07275 575 aa2.18□□□□□ -2.06
SNC1YAL030W CHO1P08456 276 aa2.18□□□□□ -2.06
SNC1YAL030W IDH2P28241 369 aaKnown RBP2.18□□□□□ -2.06
SNC1YAL030W HXT3P32466 567 aaKnown RBP2.18□□□□□ -2.06
SNC1YAL030W TOA1P32773 286 aa2.18□□□□□ -2.06
SNC1YAL030W YME1P32795 747 aa2.18□□□□□ -2.06
SNC1YAL030W PMT1P33775 817 aa2.18□□□□□ -2.06
SNC1YAL030W HCS1P34243 683 aa2.18□□□□□ -2.06
SNC1YAL030W APE3P37302 537 aaKnown RBP2.18□□□□□ -2.06
SNC1YAL030W ICS2P38284 255 aa2.18□□□□□ -2.06
SNC1YAL030W RFC1P38630 861 aaKnown RBP2.18□□□□□ -2.06
SNC1YAL030W CAJ1P39101 391 aa2.18□□□□□ -2.06
SNC1YAL030W CIN1P40987 1014 aa2.18□□□□□ -2.06
SNC1YAL030W ALK1P43633 760 aaKnown RBP2.18□□□□□ -2.06
SNC1YAL030W YJL055WP47044 245 aa2.18□□□□□ -2.06
SNC1YAL030W URB2P47108 1174 aa2.18□□□□□ -2.06
SNC1YAL030W TCB2P48231 1178 aa2.18□□□□□ -2.06
SNC1YAL030W BPL1P48445 690 aaPredicted RBP2.18□□□□□ -2.06
SNC1YAL030W MNP1P53163 194 aaPredicted RBP2.18□□□□□ -2.06
SNC1YAL030W ART5P53244 586 aaKnown RBP2.18□□□□□ -2.06
SNC1YAL030W IPI3P53877 555 aa2.18□□□□□ -2.06
SNC1YAL030W ARX1Q03862 593 aaKnown RBP2.18□□□□□ -2.06
SNC1YAL030W RPC11Q04307 110 aaPredicted RBP2.18□□□□□ -2.06
SNC1YAL030W EMI2Q04409 500 aaKnown RBP2.18□□□□□ -2.06
SNC1YAL030W SWF1Q04629 336 aa2.18□□□□□ -2.06
SNC1YAL030W ROY1Q04847 553 aa2.18□□□□□ -2.06
SNC1YAL030W DON1Q05610 365 aa2.18□□□□□ -2.06
SNC1YAL030W YOL159CQ08300 171 aa2.18□□□□□ -2.06
SNC1YAL030W SLK19Q08581 821 aaKnown RBP2.18□□□□□ -2.06
SNC1YAL030W FRE3Q08905 711 aa2.18□□□□□ -2.06
SNC1YAL030W YOR389WQ08912 624 aa2.18□□□□□ -2.06
SNC1YAL030W PAR32Q12515 295 aaKnown RBP2.18□□□□□ -2.06
SNC1YAL030W YLR111WQ12528 110 aa2.18□□□□□ -2.06
SNC1YAL030W YML133CQ03099 1374 aa2.18□□□□□ -2.06
SNC1YAL030W YLL067CQ07888 1374 aa2.18□□□□□ -2.06
SNC1YAL030W YLL066CQ99208 1374 aa2.18□□□□□ -2.06
SNC1YAL030W SPS4P09937 338 aa2.17□□□□□ -2.06
SNC1YAL030W RPL31BP0C2H9 113 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W PRP2P20095 876 aaPredicted RBP2.17□□□□□ -2.06
SNC1YAL030W TKL1P23254 680 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W ELO2P25358 347 aa2.17□□□□□ -2.06
SNC1YAL030W RPN2P32565 945 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W RML2P32611 393 aa2.17□□□□□ -2.06
SNC1YAL030W ANP1P32629 500 aa2.17□□□□□ -2.06
SNC1YAL030W YME2P32843 850 aa2.17□□□□□ -2.06
SNC1YAL030W RPS0AP32905 252 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W MDL1P33310 695 aa2.17□□□□□ -2.06
SNC1YAL030W NIP100P33420 868 aa2.17□□□□□ -2.06
SNC1YAL030W LTV1P34078 463 aa2.17□□□□□ -2.06
SNC1YAL030W MTR2P34232 184 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W HOT13P36078 116 aa2.17□□□□□ -2.06
SNC1YAL030W PXL1P36166 706 aa2.17□□□□□ -2.06
SNC1YAL030W RPL32P38061 130 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W RXT2P38255 430 aa2.17□□□□□ -2.06
SNC1YAL030W IMD2P38697 523 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W UBA4P38820 440 aa2.17□□□□□ -2.06
SNC1YAL030W YHR210CP38893 341 aa2.17□□□□□ -2.06
SNC1YAL030W SEC28P40509 296 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W ULP2P40537 1034 aaPredicted RBP2.17□□□□□ -2.06
SNC1YAL030W LCB2P40970 561 aa2.17□□□□□ -2.06
SNC1YAL030W NET1P47035 1189 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms