RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 CHST13Q8NET6 341 aa18.49■□□□□ 0.55
SPIN3-233ENST00000640039 IGDCC4Q8TDY8 1250 aa18.49■□□□□ 0.55
SPIN3-233ENST00000640039 RANBP17Q9H2T7 1088 aaKnown RBP18.49■□□□□ 0.55
SPIN3-233ENST00000640039 CCPG1Q9ULG6 757 aa18.49■□□□□ 0.55
SPIN3-233ENST00000640039 BRCA2P51587 3418 aa18.49■□□□□ 0.55
SPIN3-233ENST00000640039 CCDC69A6NI79 296 aa18.48■□□□□ 0.55
SPIN3-233ENST00000640039 DHX16O60231 1041 aaKnown RBP18.48■□□□□ 0.55
SPIN3-233ENST00000640039 HMGB1P09429 215 aaKnown RBP18.48■□□□□ 0.55
SPIN3-233ENST00000640039 TKFCQ3LXA3 575 aa18.48■□□□□ 0.55
SPIN3-233ENST00000640039 TRIB2Q92519 343 aa18.48■□□□□ 0.55
SPIN3-233ENST00000640039 AGBL1Q96MI9 1066 aa18.48■□□□□ 0.55
SPIN3-233ENST00000640039 LY9Q9HBG7 655 aa18.48■□□□□ 0.55
SPIN3-233ENST00000640039 HOMER2Q9NSB8 354 aa18.48■□□□□ 0.55
SPIN3-233ENST00000640039 PNMA2Q9UL42 364 aa18.48■□□□□ 0.55
SPIN3-233ENST00000640039 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
SPIN3-233ENST00000640039 SH2B2O14492 632 aaPredicted RBP18.47■□□□□ 0.55
SPIN3-233ENST00000640039 ICAM1P05362 532 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 HOXC6P09630 235 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 ALAS1P13196 640 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 ADCK5Q3MIX3 580 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 DHX32Q7L7V1 743 aaKnown RBP18.47■□□□□ 0.55
SPIN3-233ENST00000640039 NUP133Q8WUM0 1156 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 KCNB2Q92953 911 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 DDX11Q96FC9 970 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 UBA5Q9GZZ9 404 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 ACAD9Q9H845 621 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 SENP2Q9HC62 589 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 ZNF536O15090 1300 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 WDR19Q8NEZ3 1342 aa18.47■□□□□ 0.55
SPIN3-233ENST00000640039 CCL5P13501 91 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 LIFRP42702 1097 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 GRM4Q14833 912 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 MTFR1Q15390 333 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 CCL14Q16627 93 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 MFSD14CQ5VZR4 134 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 ZNF654Q8IZM8 581 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 ANKRD35Q8N283 1001 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 NPLOC4Q8TAT6 608 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 JAKMIP1Q96N16 626 aaKnown RBP18.46■□□□□ 0.55
SPIN3-233ENST00000640039 TRERF1Q96PN7 1200 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 LRRC2Q9BYS8 371 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 RNF208Q9H0X6 261 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 RNF146Q9NTX7 359 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 SNX14Q9Y5W7 946 aa18.46■□□□□ 0.55
SPIN3-233ENST00000640039 ZNFX1Q9P2E3 1918 aaKnown RBP18.45■□□□□ 0.54
SPIN3-233ENST00000640039 KLRF2D3W0D1 207 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 COBLO75128 1261 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 DDAH1O94760 285 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 PSMA5P28066 241 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 KIF5BP33176 963 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 FGD1P98174 961 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 TROAPQ12815 778 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 BLOC1S2Q6QNY1 142 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 SYNE3Q6ZMZ3 975 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 ADGRF4Q8IZF3 695 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 STAG2Q8N3U4 1231 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 CTCFLQ8NI51 663 aaPredicted RBP18.45■□□□□ 0.54
SPIN3-233ENST00000640039 USP26Q9BXU7 913 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 CPVLQ9H3G5 476 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 GPHNQ9NQX3 736 aaPredicted RBP18.45■□□□□ 0.54
SPIN3-233ENST00000640039 MAD2L2Q9UI95 211 aa18.45■□□□□ 0.54
SPIN3-233ENST00000640039 PALM3A6NDB9 673 aaPredicted RBP18.44■□□□□ 0.54
SPIN3-233ENST00000640039 PGK2P07205 417 aa18.44■□□□□ 0.54
SPIN3-233ENST00000640039 CDC37Q16543 378 aaPredicted RBP18.44■□□□□ 0.54
SPIN3-233ENST00000640039 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.44■□□□□ 0.54
SPIN3-233ENST00000640039 UNC93B1Q9H1C4 597 aa18.44■□□□□ 0.54
SPIN3-233ENST00000640039 VAT1LQ9HCJ6 419 aa18.44■□□□□ 0.54
SPIN3-233ENST00000640039 HMX1Q9NP08 348 aaPredicted RBP18.44■□□□□ 0.54
SPIN3-233ENST00000640039 PCDH10Q9P2E7 1040 aa18.44■□□□□ 0.54
SPIN3-233ENST00000640039 SLC12A7Q9Y666 1083 aa18.44■□□□□ 0.54
SPIN3-233ENST00000640039 CALM1P0DP23 149 aa18.43■□□□□ 0.54
SPIN3-233ENST00000640039 CALM2P0DP24 149 aa18.43■□□□□ 0.54
SPIN3-233ENST00000640039 CALM3P0DP25 149 aa18.43■□□□□ 0.54
SPIN3-233ENST00000640039 PRKAR2AP13861 404 aaKnown RBP18.43■□□□□ 0.54
SPIN3-233ENST00000640039 EXOSC10Q01780 885 aaKnown RBP18.43■□□□□ 0.54
SPIN3-233ENST00000640039 TRIM32Q13049 653 aa18.43■□□□□ 0.54
SPIN3-233ENST00000640039 COL9A3Q14050 684 aaPredicted RBP18.43■□□□□ 0.54
SPIN3-233ENST00000640039 OLFML2BQ68BL8 750 aa18.43■□□□□ 0.54
SPIN3-233ENST00000640039 TCEANC2Q96MN5 208 aa18.43■□□□□ 0.54
SPIN3-233ENST00000640039 MAP3K14Q99558 947 aa18.43■□□□□ 0.54
SPIN3-233ENST00000640039 MYL10Q9BUA6 226 aa18.43■□□□□ 0.54
SPIN3-233ENST00000640039 DIS3Q9Y2L1 958 aaKnown RBP18.43■□□□□ 0.54
SPIN3-233ENST00000640039 PFASO15067 1338 aa18.43■□□□□ 0.54
SPIN3-233ENST00000640039 RPTORQ8N122 1335 aa18.43■□□□□ 0.54
SPIN3-233ENST00000640039 PLXNA1Q9UIW2 1896 aa18.42■□□□□ 0.54
SPIN3-233ENST00000640039 CASTP20810 708 aaKnown RBP18.42■□□□□ 0.54
SPIN3-233ENST00000640039 SGMS1Q86VZ5 419 aa18.42■□□□□ 0.54
SPIN3-233ENST00000640039 MAML3Q96JK9 1138 aa18.42■□□□□ 0.54
SPIN3-233ENST00000640039 FLRT1Q9NZU1 646 aa18.42■□□□□ 0.54
SPIN3-233ENST00000640039 MYH6P13533 1939 aa18.41■□□□□ 0.54
SPIN3-233ENST00000640039 POTEB2H3BUK9 544 aa18.41■□□□□ 0.54
SPIN3-233ENST00000640039 GJB1P08034 283 aa18.41■□□□□ 0.54
SPIN3-233ENST00000640039 GNAQP50148 359 aa18.41■□□□□ 0.54
SPIN3-233ENST00000640039 CACNB2Q08289 660 aaPredicted RBP18.41■□□□□ 0.54
SPIN3-233ENST00000640039 QRICH1Q2TAL8 776 aa18.41■□□□□ 0.54
SPIN3-233ENST00000640039 ZNF792Q3KQV3 632 aa18.41■□□□□ 0.54
SPIN3-233ENST00000640039 USH1GQ495M9 461 aa18.41■□□□□ 0.54
SPIN3-233ENST00000640039 MUM1L1Q5H9M0 696 aa18.41■□□□□ 0.54
SPIN3-233ENST00000640039 NSMFQ6X4W1 530 aa18.41■□□□□ 0.54
SPIN3-233ENST00000640039 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms