RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 NT5C2P49902 561 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 CACNB2Q08289 660 aaPredicted RBP14.65□□□□□ -0.06
CLN6-225ENST00000638144 KCTD2Q14681 263 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 WTAPQ15007 396 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 ADCK5Q3MIX3 580 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 BTNL9Q6UXG8 535 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 RAB11FIP4Q86YS3 637 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 STAG2Q8N3U4 1231 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 SHISA4Q96DD7 197 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 DEFB118Q96PH6 123 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.65□□□□□ -0.064e-8■■■■□ 25.2
CLN6-225ENST00000638144 RANBP17Q9H2T7 1088 aaKnown RBP14.65□□□□□ -0.06
CLN6-225ENST00000638144 RNF146Q9NTX7 359 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 CCPG1Q9ULG6 757 aa14.65□□□□□ -0.06
CLN6-225ENST00000638144 LCTP09848 1927 aa14.64□□□□□ -0.07
CLN6-225ENST00000638144 FRMPD3Q5JV73 1810 aa14.64□□□□□ -0.07
CLN6-225ENST00000638144 ERICH2A1L162 156 aa14.64□□□□□ -0.07
CLN6-225ENST00000638144 ATP2A1O14983 1001 aa14.64□□□□□ -0.07
CLN6-225ENST00000638144 DHX16O60231 1041 aaKnown RBP14.64□□□□□ -0.07
CLN6-225ENST00000638144 HOXC6P09630 235 aa14.64□□□□□ -0.07
CLN6-225ENST00000638144 PARP1P09874 1014 aaKnown RBP14.64□□□□□ -0.07
CLN6-225ENST00000638144 SART3Q15020 963 aaKnown RBP14.64□□□□□ -0.07
CLN6-225ENST00000638144 MUM1L1Q5H9M0 696 aa14.64□□□□□ -0.07
CLN6-225ENST00000638144 LY9Q9HBG7 655 aa14.64□□□□□ -0.07
CLN6-225ENST00000638144 CPA1P15085 419 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 COPB2P35606 906 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 OAZ1P54368 228 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 ASPRV1Q53RT3 343 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 GPATCH4Q5T3I0 446 aaKnown RBP14.63□□□□□ -0.07
CLN6-225ENST00000638144 MAP3K21Q5TCX8 1036 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 RNF20Q5VTR2 975 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 ABRAQ8N0Z2 381 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 TRPV1Q8NER1 839 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 IGDCC4Q8TDY8 1250 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 U2AF1L4Q8WU68 220 aaKnown RBP14.63□□□□□ -0.07
CLN6-225ENST00000638144 MAML3Q96JK9 1138 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 TRERF1Q96PN7 1200 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 VAT1LQ9HCJ6 419 aa14.63□□□□□ -0.07
CLN6-225ENST00000638144 DDX49Q9Y6V7 483 aaKnown RBP14.63□□□□□ -0.07
CLN6-225ENST00000638144 SH2B2O14492 632 aaPredicted RBP14.62□□□□□ -0.07
CLN6-225ENST00000638144 ICAM1P05362 532 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 GJB1P08034 283 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 FDX1P10109 184 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 RXRAP19793 462 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 MCM5P33992 734 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 CDC37Q16543 378 aaPredicted RBP14.62□□□□□ -0.07
CLN6-225ENST00000638144 SLC35G1Q2M3R5 365 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 USH1GQ495M9 461 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 PRAMEF19Q5SWL8 479 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 MFSD14CQ5VZR4 134 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 ADGRF4Q8IZF3 695 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 ANKRD35Q8N283 1001 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 NUP133Q8WUM0 1156 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 ACAD9Q9H845 621 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 HMX1Q9NP08 348 aaPredicted RBP14.62□□□□□ -0.07
CLN6-225ENST00000638144 A1CFQ9NQ94 594 aaKnown RBP14.62□□□□□ -0.07
CLN6-225ENST00000638144 PAK6Q9NQU5 681 aaPredicted RBP14.62□□□□□ -0.07
CLN6-225ENST00000638144 MAD2L2Q9UI95 211 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 RPTORQ8N122 1335 aa14.62□□□□□ -0.07
CLN6-225ENST00000638144 CEP290O15078 2479 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 KLRF2D3W0D1 207 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 NFIBO00712 420 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 REC8O95072 547 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 CNGA1P29973 690 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 RGS19P49795 217 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 CNTN2Q02246 1040 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 MLLT1Q03111 559 aaPredicted RBP14.61□□□□□ -0.07
CLN6-225ENST00000638144 GRM4Q14833 912 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 ZNF792Q3KQV3 632 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 ANO1Q5XXA6 986 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 NSMFQ6X4W1 530 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 NFXL1Q6ZNB6 911 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 TRMT44Q8IYL2 757 aaKnown RBP14.61□□□□□ -0.07
CLN6-225ENST00000638144 ZNF654Q8IZM8 581 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 CHST13Q8NET6 341 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 PIBF1Q8WXW3 757 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 FGD4Q96M96 766 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 NEK1Q96PY6 1258 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 PURBQ96QR8 312 aaKnown RBP14.61□□□□□ -0.07
CLN6-225ENST00000638144 SNX14Q9Y5W7 946 aa14.61□□□□□ -0.07
CLN6-225ENST00000638144 HSPA4P34932 840 aa14.6□□□□□ -0.07
CLN6-225ENST00000638144 GJA8P48165 433 aa14.6□□□□□ -0.07
CLN6-225ENST00000638144 TROAPQ12815 778 aa14.6□□□□□ -0.07
CLN6-225ENST00000638144 QRICH1Q2TAL8 776 aa14.6□□□□□ -0.07
CLN6-225ENST00000638144 OLFML2BQ68BL8 750 aa14.6□□□□□ -0.07
CLN6-225ENST00000638144 CATIPQ7Z7H3 387 aa14.6□□□□□ -0.07
CLN6-225ENST00000638144 JAKMIP1Q96N16 626 aaKnown RBP14.6□□□□□ -0.07
CLN6-225ENST00000638144 JMJD4Q9H9V9 463 aa14.6□□□□□ -0.07
CLN6-225ENST00000638144 SLC5A4Q9NY91 659 aa14.6□□□□□ -0.07
CLN6-225ENST00000638144 FBXO40Q9UH90 709 aa14.6□□□□□ -0.07
CLN6-225ENST00000638144 LRRC37A2A6NM11 1700 aa14.59□□□□□ -0.07
CLN6-225ENST00000638144 DNAJC25-GNG10A0A024R161 153 aa14.59□□□□□ -0.07
CLN6-225ENST00000638144 PALM3A6NDB9 673 aaPredicted RBP14.59□□□□□ -0.07
CLN6-225ENST00000638144 CCDC69A6NI79 296 aa14.59□□□□□ -0.07
CLN6-225ENST00000638144 SGPL1O95470 568 aa14.59□□□□□ -0.07
CLN6-225ENST00000638144 IGHA2P01877 340 aa14.59□□□□□ -0.07
CLN6-225ENST00000638144 TFRCP02786 760 aaKnown RBP14.59□□□□□ -0.07
CLN6-225ENST00000638144 CYBAP13498 195 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms