RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 ANKS4BQ8N8V4 417 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 FAM13CQ8NE31 585 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 DNAJB8Q8NHS0 232 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 BAHD1Q8TBE0 780 aaPredicted RBP4.01□□□□□ -1.77
PSPC1-208ENST00000635562 PPP1R13LQ8WUF5 828 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 RNF141Q8WVD5 230 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 SLC9A7Q96T83 725 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 KRTAP4-5Q9BYR2 181 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 RNF32Q9H0A6 362 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 DUSP15Q9H1R2 295 aaPredicted RBP4.01□□□□□ -1.77
PSPC1-208ENST00000635562 ADAMTS10Q9H324 1103 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 PARD6AQ9NPB6 346 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 KLHL3Q9UH77 587 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 YBX2Q9Y2T7 364 aaKnown RBP4.01□□□□□ -1.77
PSPC1-208ENST00000635562 HRKO00198 91 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 MARCH6O60337 910 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 UBOX5O94941 541 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 ZGLP1P0C6A0 271 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 LTKP29376 864 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 POLR2BP30876 1174 aaKnown RBP4□□□□□ -1.77
PSPC1-208ENST00000635562 ANAPC15P60006 121 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 ERVFC1P60507 584 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 DLG4P78352 724 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 DDR2Q16832 855 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 TCERG1LQ5VWI1 586 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 ERICH6BQ5W0A0 696 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 DTWD2Q8NBA8 298 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 MICAL1Q8TDZ2 1067 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 VWCEQ96DN2 955 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 INTS4Q96HW7 963 aaKnown RBP4□□□□□ -1.77
PSPC1-208ENST00000635562 Q96M66 194 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 ASPNQ9BXN1 380 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 CCDC113Q9H0I3 377 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 SLC12A7Q9Y666 1083 aa4□□□□□ -1.77
PSPC1-208ENST00000635562 ANKRD62A6NC57 917 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 HOXA5P20719 270 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 BUD31P41223 144 aaPredicted RBP3.99□□□□□ -1.77
PSPC1-208ENST00000635562 OLFML2BQ68BL8 750 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 TMEM132EQ6IEE7 984 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 GIMAP6Q6P9H5 292 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 NOP9Q86U38 636 aaKnown RBP3.99□□□□□ -1.77
PSPC1-208ENST00000635562 TMEM192Q8IY95 271 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 KLHL6Q8WZ60 621 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 RELTQ969Z4 430 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 CCDC74BQ96LY2 380 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 DPH2Q9BQC3 489 aaPredicted RBP3.99□□□□□ -1.77
PSPC1-208ENST00000635562 MCOLN1Q9GZU1 580 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 IRF2BPLQ9H1B7 796 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 MYH16Q9H6N6 1097 aa3.99□□□□□ -1.77
PSPC1-208ENST00000635562 ZNF552Q9H707 407 aaPredicted RBP3.99□□□□□ -1.77
PSPC1-208ENST00000635562 CNOT6Q9ULM6 557 aaKnown RBP3.99□□□□□ -1.77
PSPC1-208ENST00000635562 FAM221BA6H8Z2 402 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 RAG1P15918 1043 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 PTMSP20962 102 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 RASGRF1Q13972 1273 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 NFE2L2Q16236 605 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 FXNQ16595 210 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 MRM1Q6IN84 353 aaKnown RBP3.98□□□□□ -1.77
PSPC1-208ENST00000635562 ZNF605Q86T29 641 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 PPFIBP1Q86W92 1011 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 BORCS6Q96GS4 357 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 KIF2CQ99661 725 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 ZCCHC4Q9H5U6 513 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 ZSWIM4Q9H7M6 989 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 PHAXQ9H814 394 aaKnown RBP3.98□□□□□ -1.77
PSPC1-208ENST00000635562 SP110Q9HB58 689 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 SNTG2Q9NY99 539 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 ZNF214Q9UL59 606 aaPredicted RBP3.98□□□□□ -1.77
PSPC1-208ENST00000635562 TBX22Q9Y458 520 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 PCDHA11Q9Y5I1 949 aa3.98□□□□□ -1.77
PSPC1-208ENST00000635562 OR14I1A6ND48 311 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 B2RBV5 119 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 TPD52L2O43399 206 aaKnown RBP3.97□□□□□ -1.77
PSPC1-208ENST00000635562 GJB6O95452 261 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 SYN1P17600 705 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 PDE6BP35913 854 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 PMS1P54277 932 aaKnown RBP3.97□□□□□ -1.77
PSPC1-208ENST00000635562 CHMP4BP1P59074 171 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 PPP2R5EQ16537 467 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 C6orf15Q6UXA7 325 aaPredicted RBP3.97□□□□□ -1.77
PSPC1-208ENST00000635562 RNF111Q6ZNA4 994 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 FAM178BQ8IXR5 827 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 PHACTR4Q8IZ21 702 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 ENOX1Q8TC92 643 aaKnown RBP3.97□□□□□ -1.77
PSPC1-208ENST00000635562 DEPDC7Q96QD5 511 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 TRIM55Q9BYV6 548 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.97□□□□□ -1.77
PSPC1-208ENST00000635562 ASCC2Q9H1I8 757 aaPredicted RBP3.97□□□□□ -1.77
PSPC1-208ENST00000635562 SUCOQ9UBS9 1254 aaKnown RBP3.97□□□□□ -1.77
PSPC1-208ENST00000635562 GPR160Q9UJ42 338 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 SUGT1Q9Y2Z0 365 aa3.97□□□□□ -1.77
PSPC1-208ENST00000635562 R3HCC1Q9Y3T6 440 aaKnown RBP3.97□□□□□ -1.77
PSPC1-208ENST00000635562 MYOCOSA0A1B0GUC4 107 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 C9IYK1 514 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 RBAK-RBAKDNI3L0D1 243 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 ABLIM1O14639 778 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 SASH1O94885 1247 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 CENPBP07199 599 aaPredicted RBP3.96□□□□□ -1.78
PSPC1-208ENST00000635562 TRHRP34981 398 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms