RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 BTNL9Q6UXG8 535 aa24.21■■□□□ 1.47
CIRBP-246ENST00000628979 ANKRD35Q8N283 1001 aa24.21■■□□□ 1.47
CIRBP-246ENST00000628979 MAML3Q96JK9 1138 aa24.21■■□□□ 1.47
CIRBP-246ENST00000628979 IFIT3O14879 490 aaKnown RBP24.2■■□□□ 1.46
CIRBP-246ENST00000628979 SNHG28P0DPA3 235 aa24.2■■□□□ 1.46
CIRBP-246ENST00000628979 OLFML2BQ68BL8 750 aa24.2■■□□□ 1.46
CIRBP-246ENST00000628979 CHST13Q8NET6 341 aa24.2■■□□□ 1.46
CIRBP-246ENST00000628979 UBA5Q9GZZ9 404 aa24.2■■□□□ 1.46
CIRBP-246ENST00000628979 FBXO40Q9UH90 709 aa24.2■■□□□ 1.46
CIRBP-246ENST00000628979 PLXNA1Q9UIW2 1896 aa24.19■■□□□ 1.46
CIRBP-246ENST00000628979 ERICH2A1L162 156 aa24.19■■□□□ 1.46
CIRBP-246ENST00000628979 SLC27A2O14975 620 aa24.19■■□□□ 1.46
CIRBP-246ENST00000628979 TAL1P17542 331 aaPredicted RBP24.19■■□□□ 1.46
CIRBP-246ENST00000628979 ZNF792Q3KQV3 632 aa24.19■■□□□ 1.46
CIRBP-246ENST00000628979 CREB3L3Q68CJ9 461 aa24.19■■□□□ 1.46
CIRBP-246ENST00000628979 TRERF1Q96PN7 1200 aa24.19■■□□□ 1.46
CIRBP-246ENST00000628979 RANBP17Q9H2T7 1088 aaKnown RBP24.19■■□□□ 1.46
CIRBP-246ENST00000628979 CPVLQ9H3G5 476 aa24.19■■□□□ 1.46
CIRBP-246ENST00000628979 RNF146Q9NTX7 359 aa24.19■■□□□ 1.46
CIRBP-246ENST00000628979 CCPG1Q9ULG6 757 aa24.19■■□□□ 1.46
CIRBP-246ENST00000628979 SEC23AQ15436 765 aa24.18■■□□□ 1.46
CIRBP-246ENST00000628979 PRAMEF19Q5SWL8 479 aa24.18■■□□□ 1.46
CIRBP-246ENST00000628979 GPATCH4Q5T3I0 446 aaKnown RBP24.18■■□□□ 1.46
CIRBP-246ENST00000628979 ACAD9Q9H845 621 aa24.18■■□□□ 1.46
CIRBP-246ENST00000628979 FARP2O94887 1054 aaPredicted RBP24.17■■□□□ 1.46
CIRBP-246ENST00000628979 TKFCQ3LXA3 575 aa24.17■■□□□ 1.46
CIRBP-246ENST00000628979 TRPV1Q8NER1 839 aa24.17■■□□□ 1.46
CIRBP-246ENST00000628979 CRISPLD2Q9H0B8 497 aa24.17■■□□□ 1.46
CIRBP-246ENST00000628979 TNRC18O15417 2968 aaPredicted RBP24.16■■□□□ 1.46
CIRBP-246ENST00000628979 ICAM1P05362 532 aa24.16■■□□□ 1.46
CIRBP-246ENST00000628979 PARP1P09874 1014 aaKnown RBP24.16■■□□□ 1.46
CIRBP-246ENST00000628979 WTAPQ15007 396 aa24.16■■□□□ 1.46
CIRBP-246ENST00000628979 SART3Q15020 963 aaKnown RBP24.16■■□□□ 1.46
CIRBP-246ENST00000628979 NECTIN1Q15223 517 aa24.16■■□□□ 1.46
CIRBP-246ENST00000628979 TMEM67Q5HYA8 995 aa24.16■■□□□ 1.46
CIRBP-246ENST00000628979 MB21D2Q8IYB1 491 aaPredicted RBP24.16■■□□□ 1.46
CIRBP-246ENST00000628979 SENP2Q9HC62 589 aa24.16■■□□□ 1.46
CIRBP-246ENST00000628979 DIS3Q9Y2L1 958 aaKnown RBP24.16■■□□□ 1.46
CIRBP-246ENST00000628979 DHX16O60231 1041 aaKnown RBP24.15■■□□□ 1.46
CIRBP-246ENST00000628979 ANTXR2P58335 489 aa24.15■■□□□ 1.46
CIRBP-246ENST00000628979 ASPRV1Q53RT3 343 aa24.15■■□□□ 1.46
CIRBP-246ENST00000628979 MUM1L1Q5H9M0 696 aa24.15■■□□□ 1.46
CIRBP-246ENST00000628979 TINF2Q9BSI4 451 aa24.15■■□□□ 1.46
CIRBP-246ENST00000628979 VAT1LQ9HCJ6 419 aa24.15■■□□□ 1.46
CIRBP-246ENST00000628979 SMCHD1A6NHR9 2005 aa24.14■■□□□ 1.45
CIRBP-246ENST00000628979 IGHA2P01877 340 aa24.14■■□□□ 1.45
CIRBP-246ENST00000628979 CYBAP13498 195 aa24.14■■□□□ 1.45
CIRBP-246ENST00000628979 DNAJC25-GNG10A0A024R161 153 aa24.13■■□□□ 1.45
CIRBP-246ENST00000628979 RNF20Q5VTR2 975 aa24.13■■□□□ 1.45
CIRBP-246ENST00000628979 ANO1Q5XXA6 986 aa24.13■■□□□ 1.45
CIRBP-246ENST00000628979 LHX8Q68G74 356 aa24.13■■□□□ 1.45
CIRBP-246ENST00000628979 NSMFQ6X4W1 530 aa24.13■■□□□ 1.45
CIRBP-246ENST00000628979 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.13■■□□□ 1.45
CIRBP-246ENST00000628979 DIS3LQ8TF46 1054 aaKnown RBP24.13■■□□□ 1.45
CIRBP-246ENST00000628979 PAWRQ96IZ0 340 aaKnown RBP24.13■■□□□ 1.45
CIRBP-246ENST00000628979 A1CFQ9NQ94 594 aaKnown RBP24.13■■□□□ 1.45
CIRBP-246ENST00000628979 DDX20Q9UHI6 824 aaKnown RBP24.13■■□□□ 1.45
CIRBP-246ENST00000628979 OGDHLQ9ULD0 1010 aa24.13■■□□□ 1.45
CIRBP-246ENST00000628979 POTEB2H3BUK9 544 aa24.12■■□□□ 1.45
CIRBP-246ENST00000628979 PRC1O43663 620 aa24.12■■□□□ 1.45
CIRBP-246ENST00000628979 CAPN2P17655 700 aa24.12■■□□□ 1.45
CIRBP-246ENST00000628979 MCM5P33992 734 aa24.12■■□□□ 1.45
CIRBP-246ENST00000628979 CNTN2Q02246 1040 aa24.12■■□□□ 1.45
CIRBP-246ENST00000628979 ADGRF4Q8IZF3 695 aa24.12■■□□□ 1.45
CIRBP-246ENST00000628979 STAG2Q8N3U4 1231 aa24.12■■□□□ 1.45
CIRBP-246ENST00000628979 USH1GQ495M9 461 aa24.11■■□□□ 1.45
CIRBP-246ENST00000628979 UBE2Q1Q7Z7E8 422 aa24.11■■□□□ 1.45
CIRBP-246ENST00000628979 IGDCC4Q8TDY8 1250 aa24.11■■□□□ 1.45
CIRBP-246ENST00000628979 DPF3Q92784 378 aa24.11■■□□□ 1.45
CIRBP-246ENST00000628979 GPHNQ9NQX3 736 aaPredicted RBP24.11■■□□□ 1.45
CIRBP-246ENST00000628979 CDC37Q16543 378 aaPredicted RBP24.1■■□□□ 1.45
CIRBP-246ENST00000628979 CATIPQ7Z7H3 387 aa24.1■■□□□ 1.45
CIRBP-246ENST00000628979 ANKLE1Q8NAG6 615 aa24.1■■□□□ 1.45
CIRBP-246ENST00000628979 MAD2L2Q9UI95 211 aa24.1■■□□□ 1.45
CIRBP-246ENST00000628979 CNPY2Q9Y2B0 182 aa24.1■■□□□ 1.45
CIRBP-246ENST00000628979 PFASO15067 1338 aa24.1■■□□□ 1.45
CIRBP-246ENST00000628979 KLRF2D3W0D1 207 aa24.09■■□□□ 1.45
CIRBP-246ENST00000628979 MSCO60682 206 aa24.09■■□□□ 1.45
CIRBP-246ENST00000628979 COL9A3Q14050 684 aaPredicted RBP24.09■■□□□ 1.45
CIRBP-246ENST00000628979 NFXL1Q6ZNB6 911 aa24.09■■□□□ 1.45
CIRBP-246ENST00000628979 NECAB2Q7Z6G3 386 aa24.09■■□□□ 1.45
CIRBP-246ENST00000628979 NUP133Q8WUM0 1156 aa24.09■■□□□ 1.45
CIRBP-246ENST00000628979 LRRC2Q9BYS8 371 aa24.09■■□□□ 1.45
CIRBP-246ENST00000628979 MKI67P46013 3256 aaKnown RBP24.08■■□□□ 1.45
CIRBP-246ENST00000628979 PTPDC1A2A3K4 754 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 NFIBO00712 420 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 SEPT4O43236 478 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 MYCNP04198 464 aaPredicted RBP24.08■■□□□ 1.45
CIRBP-246ENST00000628979 GRM4Q14833 912 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 MSL3Q8N5Y2 521 aaKnown RBP24.08■■□□□ 1.45
CIRBP-246ENST00000628979 FAM133AQ8N9E0 248 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 FGD4Q96M96 766 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 HTATIP2Q9BUP3 242 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 JMJD4Q9H9V9 463 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 LY9Q9HBG7 655 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 CYP39A1Q9NYL5 469 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 ZHX1Q9UKY1 873 aaPredicted RBP24.08■■□□□ 1.45
CIRBP-246ENST00000628979 PNMA2Q9UL42 364 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 PDE4DIPQ5VU43 2346 aa24.08■■□□□ 1.45
CIRBP-246ENST00000628979 SYNGAP1Q96PV0 1343 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms