RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 HOXC6P09630 235 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 GRM4Q14833 912 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 CDC37Q16543 378 aaPredicted RBP10.76□□□□□ -0.69
NELFE-214ENST00000625905 TKFCQ3LXA3 575 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 ADCK5Q3MIX3 580 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 TSGA10IPQ3SY00 556 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 DPP9Q86TI2 863 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 ZNF654Q8IZM8 581 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 CHST13Q8NET6 341 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 IGDCC4Q8TDY8 1250 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 NUP133Q8WUM0 1156 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 AGBL1Q96MI9 1066 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 JAKMIP1Q96N16 626 aaKnown RBP10.76□□□□□ -0.69
NELFE-214ENST00000625905 TMEM106CQ9BVX2 250 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 ACAD9Q9H845 621 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 RNF146Q9NTX7 359 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 PNMA2Q9UL42 364 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 RIPK3Q9Y572 518 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 ZNF536O15090 1300 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 WDR19Q8NEZ3 1342 aa10.76□□□□□ -0.69
NELFE-214ENST00000625905 EIF5BO60841 1220 aaKnown RBP10.75□□□□□ -0.69
NELFE-214ENST00000625905 ALAS1P13196 640 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 CCL5P13501 91 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 PRKAR2AP13861 404 aaKnown RBP10.75□□□□□ -0.69
NELFE-214ENST00000625905 COL9A3Q14050 684 aaPredicted RBP10.75□□□□□ -0.69
NELFE-214ENST00000625905 CCL14Q16627 93 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 DHX32Q7L7V1 743 aaKnown RBP10.75□□□□□ -0.69
NELFE-214ENST00000625905 CTCFLQ8NI51 663 aaPredicted RBP10.75□□□□□ -0.69
NELFE-214ENST00000625905 NPLOC4Q8TAT6 608 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 KCNB2Q92953 911 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 TCEANC2Q96MN5 208 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 MYL10Q9BUA6 226 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 LRRC2Q9BYS8 371 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 UBA5Q9GZZ9 404 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 CPVLQ9H3G5 476 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
NELFE-214ENST00000625905 SNX14Q9Y5W7 946 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 SLC12A7Q9Y666 1083 aa10.75□□□□□ -0.69
NELFE-214ENST00000625905 PLXNA1Q9UIW2 1896 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 KLRF2D3W0D1 207 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 COBLO75128 1261 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 PGK2P07205 417 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 TAL1P17542 331 aaPredicted RBP10.74□□□□□ -0.69
NELFE-214ENST00000625905 KIF5BP33176 963 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 LIFRP42702 1097 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 FGD1P98174 961 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 TROAPQ12815 778 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 MTFR1Q15390 333 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 MFSD14CQ5VZR4 134 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 OLFML2BQ68BL8 750 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 BLOC1S2Q6QNY1 142 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.74□□□□□ -0.69
NELFE-214ENST00000625905 ADGRF4Q8IZF3 695 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 ANKRD35Q8N283 1001 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 TMTC2Q8N394 836 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 STAG2Q8N3U4 1231 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 DDX11Q96FC9 970 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 RNF208Q9H0X6 261 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 UNC93B1Q9H1C4 597 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 MAD2L2Q9UI95 211 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 PFASO15067 1338 aa10.74□□□□□ -0.69
NELFE-214ENST00000625905 POTEFA5A3E0 1075 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 PALM3A6NDB9 673 aaPredicted RBP10.73□□□□□ -0.69
NELFE-214ENST00000625905 CALM1P0DP23 149 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 CALM2P0DP24 149 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 CALM3P0DP25 149 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 CASTP20810 708 aaKnown RBP10.73□□□□□ -0.69
NELFE-214ENST00000625905 PSMA5P28066 241 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 TRIM32Q13049 653 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 USH1GQ495M9 461 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 SYNE3Q6ZMZ3 975 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 SGMS1Q86VZ5 419 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 MICU3Q86XE3 530 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 MAML3Q96JK9 1138 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 TRERF1Q96PN7 1200 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 USP26Q9BXU7 913 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.73□□□□□ -0.69
NELFE-214ENST00000625905 HMX1Q9NP08 348 aaPredicted RBP10.73□□□□□ -0.69
NELFE-214ENST00000625905 A1CFQ9NQ94 594 aaKnown RBP10.73□□□□□ -0.69
NELFE-214ENST00000625905 FLRT1Q9NZU1 646 aa10.73□□□□□ -0.69
NELFE-214ENST00000625905 MYH6P13533 1939 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 CPA1P15085 419 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 RXRAP19793 462 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 CYP2C19P33261 490 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 EXOSC10Q01780 885 aaKnown RBP10.72□□□□□ -0.69
NELFE-214ENST00000625905 QRICH1Q2TAL8 776 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 ZNF792Q3KQV3 632 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 MUM1L1Q5H9M0 696 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 MAP3K21Q5TCX8 1036 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 APOA5Q6Q788 366 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 NSMFQ6X4W1 530 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 HOMER1Q86YM7 354 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 RAB11FIP4Q86YS3 637 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 CCDC144CPQ8IYA2 1237 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 MAP3K14Q99558 947 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 VAT1LQ9HCJ6 419 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 PAK6Q9NQU5 681 aaPredicted RBP10.72□□□□□ -0.69
NELFE-214ENST00000625905 DIS3Q9Y2L1 958 aaKnown RBP10.72□□□□□ -0.69
NELFE-214ENST00000625905 ABCB11O95342 1321 aa10.72□□□□□ -0.69
NELFE-214ENST00000625905 RPTORQ8N122 1335 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms