RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 CYB5R4Q7L1T6 521 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 ARMCX6Q7L4S7 300 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 C1orf131Q8NDD1 294 aaKnown RBP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 RBM17Q96I25 401 aaKnown RBP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 LZTS2Q9BRK4 669 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 IQCGQ9H095 443 aaKnown RBP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 ZFATQ9P243 1243 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 ZNF330Q9Y3S2 320 aaPredicted RBP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 PCDH11XQ9BZA7 1347 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 PCDH11YQ9BZA8 1340 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 SSBP05455 408 aaKnown RBP eCLIP8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 MYL1P05976 194 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 ALDH1B1P30837 517 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 MCAMP43121 646 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 PTPN21Q16825 1174 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 CCDC178Q5BJE1 867 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 ACBD5Q5T8D3 534 aaPredicted RBP8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 ANO1Q5XXA6 986 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 IQCEQ6IPM2 695 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 CCDC70Q6NSX1 233 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 CCNI2Q6ZMN8 369 aaPredicted RBP8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 TRIM42Q8IWZ5 723 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 KCNG4Q8TDN1 519 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 APPBP2Q92624 585 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 STAMBPL1Q96FJ0 436 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 FAM89AQ96GI7 184 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 CCT8L2Q96SF2 557 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 LZTFL1Q9NQ48 299 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 INTS13Q9NVM9 706 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 TUBE1Q9UJT0 475 aa8.34□□□□□ -1.08
TRIM49B-202ENST00000622138 SPATA31A3Q5VYP0 1347 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 B4DLN1 442 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 AKR1B15C9JRZ8 316 aaPredicted RBP8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 NPTXRO95502 500 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 ATF3P18847 181 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 FECHP22830 423 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 SCTRP47872 440 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 ELF3P78545 371 aaPredicted RBP8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 HDLBPQ00341 1268 aaKnown RBP8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 DBN1Q16643 649 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 TTMPQ5BVD1 217 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 TRAPPC11Q7Z392 1133 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 PDILTQ8N807 584 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 EHBP1Q8NDI1 1231 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 ZCRB1Q8TBF4 217 aaKnown RBP8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 TBC1D31Q96DN5 1066 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 ZNF570Q96NI8 536 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 TRIM4Q9C037 500 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 MAF1Q9H063 256 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 MMADHCQ9H3L0 296 aaPredicted RBP8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 PIH1D3Q9NQM4 214 aaKnown RBP8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 FANCLQ9NW38 375 aa8.33□□□□□ -1.08
TRIM49B-202ENST00000622138 MYH8P13535 1937 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 HSF2BPO75031 334 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 GSTA1P08263 222 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 VIMP08670 466 aaKnown RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 ATP4AP20648 1035 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 CNGA1P29973 690 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 CDC27P30260 824 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 NNTQ13423 1086 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 TCIRG1Q13488 830 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 CDC37Q16543 378 aaPredicted RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 SHC4Q6S5L8 630 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 NCOA7Q8NI08 942 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 ARHGEF1Q92888 912 aaKnown RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 PHKBQ93100 1093 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 L3MBTL3Q96JM7 780 aaPredicted RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 RANBP17Q9H2T7 1088 aaKnown RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 RMI1Q9H9A7 625 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 INCENPQ9NQS7 918 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 SLC5A4Q9NY91 659 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 TACC3Q9Y6A5 838 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 ZMYM6O95789 1325 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 WDR17Q8IZU2 1322 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 RASSF10A6NK89 507 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 SH2B2O14492 632 aaPredicted RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 CPLX1O14810 134 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 RANBP6O60518 1105 aaKnown RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 ANP32DO95626 131 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 ZFYP08048 801 aaPredicted RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 CMA1P23946 247 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 EPHB4P54760 987 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 RASA3Q14644 834 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 PTPAQ15257 358 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 KIAA0753Q2KHM9 967 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 PPP4R3AQ6IN85 833 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 EMBQ6PCB8 327 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 OLFM4Q6UX06 510 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 RALYLQ86SE5 291 aaKnown RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 VPS37DQ86XT2 251 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 CCDC51Q96ER9 411 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 CYFIP2Q96F07 1278 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 CDC5LQ99459 802 aaKnown RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 MYL10Q9BUA6 226 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 OSBPL7Q9BZF2 842 aa8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 COL5A2P05997 1499 aaPredicted RBP8.32□□□□□ -1.08
TRIM49B-202ENST00000622138 ATRNO75882 1429 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 C5orf60A6NFR6 353 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms