RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 HLA-DOAP06340 250 aa19.94■□□□□ 0.78
CNOT3-209ENST00000617930 CCDC144BQ3MJ40 725 aa19.94■□□□□ 0.78
CNOT3-209ENST00000617930 FERMT2Q96AC1 680 aa19.94■□□□□ 0.78
CNOT3-209ENST00000617930 GJA3Q9Y6H8 435 aa19.94■□□□□ 0.78
CNOT3-209ENST00000617930 COL2A1P02458 1487 aaPredicted RBP19.94■□□□□ 0.78
CNOT3-209ENST00000617930 TTLL1O95922 423 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 PTGS1P23219 599 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 SMARCA1P28370 1054 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 POSTNQ15063 836 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 NT5DC1Q5TFE4 455 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 TTBK2Q6IQ55 1244 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 SAMD7Q7Z3H4 446 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 SIAH1Q8IUQ4 282 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 ZSCAN29Q8IWY8 852 aaPredicted RBP19.93■□□□□ 0.78
CNOT3-209ENST00000617930 NAT10Q9H0A0 1025 aaKnown RBP19.93■□□□□ 0.78
CNOT3-209ENST00000617930 DHX36Q9H2U1 1008 aaKnown RBP19.93■□□□□ 0.78
CNOT3-209ENST00000617930 CASP1P29466 404 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 TNIP1Q15025 636 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 INF2Q27J81 1249 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 MTERF4Q7Z6M4 381 aaKnown RBP19.93■□□□□ 0.78
CNOT3-209ENST00000617930 MICALL2Q8IY33 904 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 DHX58Q96C10 678 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 TMEM39BQ9GZU3 492 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 TMEM60Q9H2L4 133 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 GPCPD1Q9NPB8 672 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 PI4KBQ9UBF8 816 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 MAN1B1Q9UKM7 699 aa19.93■□□□□ 0.78
CNOT3-209ENST00000617930 BMP15O95972 392 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 RBM26Q5T8P6 1007 aaKnown RBP19.92■□□□□ 0.78
CNOT3-209ENST00000617930 CCDC186Q7Z3E2 898 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 SH3RF1Q7Z6J0 888 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 DRC7Q8IY82 874 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 SPATA20Q8TB22 786 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 KIAA1524Q8TCG1 905 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 VEZTQ9HBM0 779 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 PYCARDQ9ULZ3 195 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 SMCO2A6NFE2 343 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 MPHOSPH10O00566 681 aaKnown RBP19.92■□□□□ 0.78
CNOT3-209ENST00000617930 PPP1R11O60927 126 aaPredicted RBP19.92■□□□□ 0.78
CNOT3-209ENST00000617930 CDC25AP30304 524 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 NAPAP54920 295 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 TATDN1Q6P1N9 297 aa19.92■□□□□ 0.78
CNOT3-209ENST00000617930 RRP36Q96EU6 259 aaKnown RBP19.92■□□□□ 0.78
CNOT3-209ENST00000617930 ZNF543Q08ER8 600 aa19.91■□□□□ 0.78
CNOT3-209ENST00000617930 E2F4Q16254 413 aa19.91■□□□□ 0.78
CNOT3-209ENST00000617930 CCDC148Q8NFR7 591 aa19.91■□□□□ 0.78
CNOT3-209ENST00000617930 MED15Q96RN5 788 aa19.91■□□□□ 0.78
CNOT3-209ENST00000617930 MYH4Q9Y623 1939 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 EDIL3O43854 480 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 GDF11O95390 407 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 GALNT17Q6IS24 598 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.9■□□□□ 0.78
CNOT3-209ENST00000617930 FAM151AQ8WW52 585 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 COA7Q96BR5 231 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 PAGE5Q96GU1 130 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 MRFAP1L1Q96HT8 127 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 CSRNP1Q96S65 589 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 MTRQ99707 1265 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 JMJD4Q9H9V9 463 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 CCDC194A0A1B0GVG4 234 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 CDC25BP30305 580 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 LRMPQ12912 555 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 MORC3Q14149 939 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 ZRSR1Q15695 479 aaKnown RBP19.9■□□□□ 0.78
CNOT3-209ENST00000617930 TBC1D10BQ4KMP7 808 aaPredicted RBP19.9■□□□□ 0.78
CNOT3-209ENST00000617930 ASPRV1Q53RT3 343 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 TMEM260Q9NX78 707 aa19.9■□□□□ 0.78
CNOT3-209ENST00000617930 CNOT7Q9UIV1 285 aaKnown RBP19.9■□□□□ 0.78
CNOT3-209ENST00000617930 SLFN14P0C7P3 912 aa19.89■□□□□ 0.77
CNOT3-209ENST00000617930 ATP1A3P13637 1013 aa19.89■□□□□ 0.77
CNOT3-209ENST00000617930 LMNB1P20700 586 aa19.89■□□□□ 0.77
CNOT3-209ENST00000617930 RPS12P25398 132 aaKnown RBP19.89■□□□□ 0.77
CNOT3-209ENST00000617930 SLC16A2P36021 539 aa19.89■□□□□ 0.77
CNOT3-209ENST00000617930 ARID5BQ14865 1188 aa19.89■□□□□ 0.77
CNOT3-209ENST00000617930 ADGRF4Q8IZF3 695 aa19.89■□□□□ 0.77
CNOT3-209ENST00000617930 EEF2P13639 858 aaKnown RBP19.88■□□□□ 0.77
CNOT3-209ENST00000617930 AFMP43652 599 aa19.88■□□□□ 0.77
CNOT3-209ENST00000617930 ATP2B2Q01814 1243 aa19.88■□□□□ 0.77
CNOT3-209ENST00000617930 KCTD1Q719H9 257 aa19.88■□□□□ 0.77
CNOT3-209ENST00000617930 STAMQ92783 540 aa19.88■□□□□ 0.77
CNOT3-209ENST00000617930 DPF2Q92785 391 aa19.88■□□□□ 0.77
CNOT3-209ENST00000617930 IKBKBO14920 756 aa19.88■□□□□ 0.77
CNOT3-209ENST00000617930 FMR1Q06787 632 aaKnown RBP eCLIP19.88■□□□□ 0.77
CNOT3-209ENST00000617930 CERKLQ49MI3 558 aaPredicted RBP19.88■□□□□ 0.77
CNOT3-209ENST00000617930 TRPM4Q8TD43 1214 aa19.88■□□□□ 0.77
CNOT3-209ENST00000617930 CCDC17Q96LX7 622 aa19.88■□□□□ 0.77
CNOT3-209ENST00000617930 TMOD2Q9NZR1 351 aa19.88■□□□□ 0.77
CNOT3-209ENST00000617930 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.88■□□□□ 0.77
CNOT3-209ENST00000617930 BIN2Q9UBW5 565 aaPredicted RBP19.88■□□□□ 0.77
CNOT3-209ENST00000617930 PP2D1A8MPX8 630 aa19.87■□□□□ 0.77
CNOT3-209ENST00000617930 LMOD1P29536 600 aaPredicted RBP19.87■□□□□ 0.77
CNOT3-209ENST00000617930 SEPT2Q15019 361 aa19.87■□□□□ 0.77
CNOT3-209ENST00000617930 ARL6IP4Q66PJ3 421 aaKnown RBP19.87■□□□□ 0.77
CNOT3-209ENST00000617930 PDXDC2PQ6P474 469 aa19.87■□□□□ 0.77
CNOT3-209ENST00000617930 MKL1Q969V6 931 aa19.87■□□□□ 0.77
CNOT3-209ENST00000617930 SEC63Q9UGP8 760 aaKnown RBP19.87■□□□□ 0.77
CNOT3-209ENST00000617930 USP17L10C9JJH3 530 aa19.86■□□□□ 0.77
CNOT3-209ENST00000617930 FKBP1CQ5VVH2 108 aa19.86■□□□□ 0.77
CNOT3-209ENST00000617930 FAM177A1Q8N128 213 aaPredicted RBP19.86■□□□□ 0.77
CNOT3-209ENST00000617930 LRRC15Q8TF66 581 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms