RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 KHSRPQ92945 711 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL4A2-210ENST00000617564 LENG1Q96BZ8 264 aaPredicted RBP14.38□□□□□ -0.11
COL4A2-210ENST00000617564 DDX11Q96FC9 970 aa14.38□□□□□ -0.11
COL4A2-210ENST00000617564 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL4A2-210ENST00000617564 PRR33A8MZF0 331 aa14.37□□□□□ -0.11
COL4A2-210ENST00000617564 DUSP11O75319 330 aaKnown RBP14.37□□□□□ -0.11
COL4A2-210ENST00000617564 SKIV2LQ15477 1246 aaKnown RBP14.37□□□□□ -0.11
COL4A2-210ENST00000617564 CCSAPQ6IQ19 270 aaPredicted RBP14.37□□□□□ -0.11
COL4A2-210ENST00000617564 CCDC174Q6PII3 467 aa14.37□□□□□ -0.11
COL4A2-210ENST00000617564 PRPF38AQ8NAV1 312 aaKnown RBP14.37□□□□□ -0.11
COL4A2-210ENST00000617564 PUS7LQ9H0K6 701 aaKnown RBP14.37□□□□□ -0.11
COL4A2-210ENST00000617564 RCAN3Q9UKA8 241 aa14.37□□□□□ -0.11
COL4A2-210ENST00000617564 ZHX1Q9UKY1 873 aaPredicted RBP14.37□□□□□ -0.11
COL4A2-210ENST00000617564 TBX21Q9UL17 535 aa14.37□□□□□ -0.11
COL4A2-210ENST00000617564 SYNPO2Q9UMS6 1093 aa14.37□□□□□ -0.11
COL4A2-210ENST00000617564 ELP1O95163 1332 aa14.37□□□□□ -0.11
COL4A2-210ENST00000617564 F5H6K3 240 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 ERC2O15083 957 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 SNAI1O95863 264 aaPredicted RBP14.36□□□□□ -0.11
COL4A2-210ENST00000617564 NDUFB10O96000 172 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 TIMP1P01033 207 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 CHGBP05060 677 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 RASA1P20936 1047 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 KLRC3Q07444 240 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 PCSK9Q8NBP7 692 aaKnown RBP14.36□□□□□ -0.11
COL4A2-210ENST00000617564 GLT1D1Q96MS3 346 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 STRBPQ96SI9 672 aaKnown RBP14.36□□□□□ -0.11
COL4A2-210ENST00000617564 MKNK2Q9HBH9 465 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 SPC25Q9HBM1 224 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 FBXO40Q9UH90 709 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 COG6Q9Y2V7 657 aa14.36□□□□□ -0.11
COL4A2-210ENST00000617564 GRXCR1A8MXD5 290 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 ZBED4O75132 1171 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 OAZ1P54368 228 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 PPIGQ13427 754 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL4A2-210ENST00000617564 ACVR2BQ13705 512 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 KCNA10Q16322 511 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 MFSD5Q6N075 450 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 NUP88Q99567 741 aaPredicted RBP14.35□□□□□ -0.11
COL4A2-210ENST00000617564 LRRCC1Q9C099 1032 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 BCL11AQ9H165 835 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 UPF3AQ9H1J1 476 aaKnown RBP14.35□□□□□ -0.11
COL4A2-210ENST00000617564 ABHD16BQ9H3Z7 469 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 ZNF287Q9HBT7 754 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.35□□□□□ -0.11
COL4A2-210ENST00000617564 RIPK3Q9Y572 518 aa14.35□□□□□ -0.11
COL4A2-210ENST00000617564 CTDP1Q9Y5B0 961 aaPredicted RBP14.35□□□□□ -0.11
COL4A2-210ENST00000617564 IGKV6D-41A0A0C4DH26 115 aa14.34□□□□□ -0.11
COL4A2-210ENST00000617564 A0A0U1RQG5 324 aaPredicted RBP14.34□□□□□ -0.11
COL4A2-210ENST00000617564 GSG1L2A8MUP6 293 aa14.34□□□□□ -0.11
COL4A2-210ENST00000617564 CDK7P50613 346 aa14.34□□□□□ -0.11
COL4A2-210ENST00000617564 GJA9P57773 515 aa14.34□□□□□ -0.11
COL4A2-210ENST00000617564 CHST13Q8NET6 341 aa14.34□□□□□ -0.11
COL4A2-210ENST00000617564 APPBP2Q92624 585 aa14.34□□□□□ -0.11
COL4A2-210ENST00000617564 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL4A2-210ENST00000617564 SLC38A10Q9HBR0 1119 aa14.34□□□□□ -0.11
COL4A2-210ENST00000617564 MSRAQ9UJ68 235 aa14.34□□□□□ -0.11
COL4A2-210ENST00000617564 FEM1BQ9UK73 627 aa14.34□□□□□ -0.11
COL4A2-210ENST00000617564 PLIN4Q96Q06 1357 aa14.34□□□□□ -0.11
COL4A2-210ENST00000617564 MYADML2A6NDP7 307 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 TLR3O15455 904 aaKnown RBP14.33□□□□□ -0.12
COL4A2-210ENST00000617564 TLL1O43897 1013 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 C6orf222P0C671 652 aaPredicted RBP14.33□□□□□ -0.12
COL4A2-210ENST00000617564 FDX1P10109 184 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 GNAT2P19087 354 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 NKX3-2P78367 333 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 FOXK2Q01167 660 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 RAB30Q15771 203 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 CPXCR1Q8N123 301 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 ANKRD35Q8N283 1001 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 KBTBD3Q8NAB2 608 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 GMCL1P1Q8NEA9 526 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 HERVK_113Q902F9 699 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 MKL1Q969V6 931 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 KIFC2Q96AC6 838 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 FGD4Q96M96 766 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 UIMC1Q96RL1 719 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 ECHDC1Q9NTX5 307 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 CLIP2Q9UDT6 1046 aa14.33□□□□□ -0.12
COL4A2-210ENST00000617564 LRRC37A2A6NM11 1700 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 CHD9Q3L8U1 2897 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 WDFY4Q6ZS81 3184 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 MINDY4BA8MYZ0 360 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 ARVCFO00192 962 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 ASGR1P07306 291 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 ZFYP08048 801 aaPredicted RBP14.32□□□□□ -0.12
COL4A2-210ENST00000617564 CCDC144BQ3MJ40 725 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 RASIP1Q5U651 963 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 PSRC1Q6PGN9 363 aaPredicted RBP14.32□□□□□ -0.12
COL4A2-210ENST00000617564 ARMCX2Q7L311 632 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 TMEM199Q8N511 208 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 GPATCH3Q96I76 525 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 FBXL18Q96ME1 805 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 SLC28A3Q9HAS3 691 aa14.32□□□□□ -0.12
COL4A2-210ENST00000617564 RAVER2Q9HCJ3 691 aaKnown RBP14.32□□□□□ -0.12
COL4A2-210ENST00000617564 ADCY6O43306 1168 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 TTLL1O95922 423 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 GNASQ5JWF2 1037 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 TMEM240Q5SV17 173 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms