RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SYT17Q9BSW7 474 aa10.26□□□□□ -0.77
CCDC47-207ENST00000612558 FTOQ9C0B1 505 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCDC47-207ENST00000612558 BRMS1Q9HCU9 246 aa10.26□□□□□ -0.77
CCDC47-207ENST00000612558 CABP5Q9NP86 173 aa10.26□□□□□ -0.77
CCDC47-207ENST00000612558 ISY1Q9ULR0 285 aaKnown RBP10.26□□□□□ -0.77
CCDC47-207ENST00000612558 ARIH1Q9Y4X5 557 aaPredicted RBP10.26□□□□□ -0.77
CCDC47-207ENST00000612558 EEF2P13639 858 aaKnown RBP10.25□□□□□ -0.77
CCDC47-207ENST00000612558 DEKP35659 375 aaKnown RBP10.25□□□□□ -0.77
CCDC47-207ENST00000612558 KRT2P35908 639 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 NLRP5P59047 1200 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 ZNF445P59923 1031 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 ATP2B2Q01814 1243 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 TNFAIP1Q13829 316 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 SEPT2Q15019 361 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 STK38Q15208 465 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 SLC35G1Q2M3R5 365 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 RILPL1Q5EBL4 403 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 GPATCH4Q5T3I0 446 aaKnown RBP10.25□□□□□ -0.77
CCDC47-207ENST00000612558 CLEC10AQ8IUN9 316 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 KCNG4Q8TDN1 519 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 PIBF1Q8WXW3 757 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 SHISA4Q96DD7 197 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 PGBD1Q96JS3 809 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 TMEM39BQ9GZU3 492 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-207ENST00000612558 CLIC4Q9Y696 253 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 MYH4Q9Y623 1939 aa10.25□□□□□ -0.77
CCDC47-207ENST00000612558 ZNF541Q9H0D2 1346 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 DICER1Q9UPY3 1922 aaKnown RBP10.24□□□□□ -0.77
CCDC47-207ENST00000612558 H7C1D1 291 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 SPTLC2O15270 562 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 GDF11O95390 407 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 GH2P01242 217 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 CALML3P27482 149 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 MAP3K10Q02779 954 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 ZNF543Q08ER8 600 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 SF3A1Q15459 793 aaKnown RBP10.24□□□□□ -0.77
CCDC47-207ENST00000612558 TPRNQ4KMQ1 711 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 CCDC183Q5T5S1 534 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 GPC2Q8N158 579 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 RRP36Q96EU6 259 aaKnown RBP10.24□□□□□ -0.77
CCDC47-207ENST00000612558 RIOX1Q9H6W3 641 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 PGAP2Q9UHJ9 254 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 SYNPO2Q9UMS6 1093 aa10.24□□□□□ -0.77
CCDC47-207ENST00000612558 FSD2A1L4K1 749 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 GOLGA6L3A6NEY3 463 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 LETM1O95202 739 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-207ENST00000612558 EGFRP00533 1210 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 VEGFAP15692 232 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-207ENST00000612558 ME1P48163 572 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 ICA1Q05084 483 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 NR5A1Q13285 461 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 RASA3Q14644 834 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 SLC39A14Q15043 492 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 NPY5RQ15761 445 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 KIF4BQ2VIQ3 1234 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 TBC1D10BQ4KMP7 808 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-207ENST00000612558 ADALQ6DHV7 355 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 GALNT17Q6IS24 598 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 NUDT18Q6ZVK8 323 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 RASGRP2Q7LDG7 609 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 SIAH1Q8IUQ4 282 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 CCDC148Q8NFR7 591 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 BICD2Q8TD16 824 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 DCAF4Q8WV16 495 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 UBA5Q9GZZ9 404 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 BARHL2Q9NY43 387 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 SEC63Q9UGP8 760 aaKnown RBP10.23□□□□□ -0.77
CCDC47-207ENST00000612558 PCDHA7Q9UN72 937 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 FRMPD2Q68DX3 1309 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-207ENST00000612558 SBF1O95248 1867 aa10.23□□□□□ -0.77
CCDC47-207ENST00000612558 A0A1W2PQ27 194 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 A0A1W2PQ64 194 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 A0A1W2PQD8 194 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 hCG_1984214I3L0E3 225 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 PPP6R2O75170 966 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 RRP1BQ14684 758 aaKnown RBP10.22□□□□□ -0.77
CCDC47-207ENST00000612558 SHROOM1Q2M3G4 852 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-207ENST00000612558 HEATR3Q7Z4Q2 680 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 ZNF713Q8N859 430 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-207ENST00000612558 JMYQ8N9B5 988 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 GMCL1P1Q8NEA9 526 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 CCDC12Q8WUD4 166 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-207ENST00000612558 GPKOWQ92917 476 aaPredicted RBP eCLIP10.22□□□□□ -0.77
CCDC47-207ENST00000612558 TNFRSF25Q93038 417 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 CPVLQ9H3G5 476 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 VAT1LQ9HCJ6 419 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 GPCPD1Q9NPB8 672 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 GPRC5DQ9NZD1 345 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 SYCE3A1L190 88 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 STXBP3O00186 592 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 LIG1P18858 919 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 SLC1A4P43007 532 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 TOB1P50616 345 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-207ENST00000612558 JAG1P78504 1218 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 PTPAQ15257 358 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 CCDC96Q2M329 555 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 L1TD1Q5T7N2 865 aaKnown RBP10.22□□□□□ -0.77
CCDC47-207ENST00000612558 SLFN13Q68D06 897 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 WWC2Q6AWC2 1192 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms