RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 LIMA1Q9UHB6 759 aaKnown RBP15.77■□□□□ 0.11
COL6A1-207ENST00000612273 RPS8P62241 208 aaKnown RBP15.76■□□□□ 0.11
COL6A1-207ENST00000612273 TBC1D9BQ66K14 1250 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 TXLNBQ8N3L3 684 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 GJA10Q969M2 543 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 IL17RBQ9NRM6 502 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 ANAPC4Q9UJX5 808 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 BAZ2AQ9UIF9 1905 aaKnown RBP15.76■□□□□ 0.11
COL6A1-207ENST00000612273 PSMA7O14818 248 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 KIF5BP33176 963 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 STK4Q13043 487 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 USP17L2Q6R6M4 530 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 MARCH10Q8NA82 808 aaPredicted RBP15.76■□□□□ 0.11
COL6A1-207ENST00000612273 TUBGCP2Q9BSJ2 902 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 BRIP1Q9BX63 1249 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 KANSL2Q9H9L4 492 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 L1RE1Q9UN81 338 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 DDAH1O94760 285 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 PLCG1P19174 1290 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 TXKP42681 527 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 SPAG1Q07617 926 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 UBE4AQ14139 1066 aa15.76■□□□□ 0.11
COL6A1-207ENST00000612273 DNAJC21Q5F1R6 531 aaKnown RBP15.76■□□□□ 0.11
COL6A1-207ENST00000612273 NBPF5PQ86XG9 351 aaPredicted RBP15.76■□□□□ 0.11
COL6A1-207ENST00000612273 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 NAPAP54920 295 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 NAP1L1P55209 391 aaKnown RBP15.75■□□□□ 0.11
COL6A1-207ENST00000612273 TXNRD1Q16881 649 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 CCDC96Q2M329 555 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.75■□□□□ 0.11
COL6A1-207ENST00000612273 ZNF444Q8N0Y2 327 aaPredicted RBP15.75■□□□□ 0.11
COL6A1-207ENST00000612273 CCDC148Q8NFR7 591 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 SH3RF3Q8TEJ3 882 aaPredicted RBP15.75■□□□□ 0.11
COL6A1-207ENST00000612273 EHD2Q9NZN4 543 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 BIN2Q9UBW5 565 aaPredicted RBP15.75■□□□□ 0.11
COL6A1-207ENST00000612273 HERVK_113P62684 666 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 PPP2R5BQ15173 497 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 JAKMIP2Q96AA8 810 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 MMRN2Q9H8L6 949 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 RMND1Q9NWS8 449 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 RSPH14Q9UHP6 348 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 ZNF652Q9Y2D9 606 aa15.75■□□□□ 0.11
COL6A1-207ENST00000612273 CYTH3O43739 400 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 SSBP05455 408 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL6A1-207ENST00000612273 C2orf54Q08AI8 447 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 STIM1Q13586 685 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 WDR59Q6PJI9 974 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 ADSSL1Q8N142 457 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 NOC4LQ9BVI4 516 aaKnown RBP15.74■□□□□ 0.11
COL6A1-207ENST00000612273 TULP1O00294 542 aaPredicted RBP15.74■□□□□ 0.11
COL6A1-207ENST00000612273 PIP4K2BP78356 416 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 LRRC41Q15345 812 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 SLC35G1Q2M3R5 365 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 LEKR1Q6ZMV7 388 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 BSDC1Q9NW68 430 aaPredicted RBP15.74■□□□□ 0.11
COL6A1-207ENST00000612273 PCDHA4Q9UN74 947 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 SAR1BQ9Y6B6 198 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 DCCP43146 1447 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 EIF3JO75822 258 aaKnown RBP15.74■□□□□ 0.11
COL6A1-207ENST00000612273 RNASE9P60153 205 aaKnown RBP15.74■□□□□ 0.11
COL6A1-207ENST00000612273 SLC7A5Q01650 507 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 PTPROQ16827 1216 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 ANKRD40Q6AI12 368 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 TTC19Q6DKK2 380 aaPredicted RBP15.74■□□□□ 0.11
COL6A1-207ENST00000612273 CLEC10AQ8IUN9 316 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 CCDC155Q8N6L0 562 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 TANGO6Q9C0B7 1094 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 ZNHIT6Q9NWK9 470 aaKnown RBP15.74■□□□□ 0.11
COL6A1-207ENST00000612273 COL4A1P02462 1669 aa15.74■□□□□ 0.11
COL6A1-207ENST00000612273 ZNF142P52746 1687 aaPredicted RBP15.74■□□□□ 0.11
COL6A1-207ENST00000612273 STRCP1A6NGW2 1772 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 H7C1D1 291 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 EZH2Q15910 746 aaKnown RBP15.73■□□□□ 0.11
COL6A1-207ENST00000612273 CABP7Q86V35 215 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 CNOT6LQ96LI5 555 aaKnown RBP15.73■□□□□ 0.11
COL6A1-207ENST00000612273 FAM204AQ9H8W3 233 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 EXOC1Q9NV70 894 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 TMEM51Q9NW97 253 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
COL6A1-207ENST00000612273 MYH8P13535 1937 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 MAP2K7O14733 419 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 ARID5AQ03989 594 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 NLRP3Q96P20 1036 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 DEF6Q9H4E7 631 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 TCP11L1Q9NUJ3 509 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 TMEM260Q9NX78 707 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 TBC1D7Q9P0N9 293 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 LRWD1Q9UFC0 647 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 PCDHA6Q9UN73 950 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 PCDHA8Q9Y5H6 950 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 ZNF804BA4D1E1 1349 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 TOGARAM1Q9Y4F4 1720 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 TAF1P21675 1872 aa15.73■□□□□ 0.11
COL6A1-207ENST00000612273 LGALS16A8MUM7 142 aa15.72■□□□□ 0.11
COL6A1-207ENST00000612273 KLRF2D3W0D1 207 aa15.72■□□□□ 0.11
COL6A1-207ENST00000612273 ATP8B1O43520 1251 aa15.72■□□□□ 0.11
COL6A1-207ENST00000612273 MYBL2P10244 700 aa15.72■□□□□ 0.11
COL6A1-207ENST00000612273 CALML3P27482 149 aa15.72■□□□□ 0.11
COL6A1-207ENST00000612273 C2CD5Q86YS7 1000 aa15.72■□□□□ 0.11
COL6A1-207ENST00000612273 CCDC51Q96ER9 411 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms