RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.12□□□□□ -1.27
SNX13-213ENST00000611725 L2HGDHQ9H9P8 463 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 SH3GLB2Q9NR46 395 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 PCDHA1Q9Y5I3 950 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 CETN3O15182 167 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 CUL4BQ13620 913 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 STAG2Q8N3U4 1231 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 ADGRG1Q9Y653 693 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 PARP3Q9Y6F1 533 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 RIC1Q4ADV7 1423 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 A0A1B0GTH6 734 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 SMIM22K7EJ46 135 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 ACTN4O43707 911 aaKnown RBP7.12□□□□□ -1.27
SNX13-213ENST00000611725 RAPGEF1Q13905 1077 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 GRM4Q14833 912 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 CCDC65Q8IXS2 484 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 LARP4BQ92615 738 aaKnown RBP7.12□□□□□ -1.27
SNX13-213ENST00000611725 NT5C3AQ9H0P0 336 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 SLC39A2Q9NP94 309 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 CNTNAP4Q9C0A0 1308 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 FAM237AA0A1B0GTK4 181 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 SOWAHDA6NJG2 315 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 PP2D1A8MPX8 630 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 P2RX5Q93086 422 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 IQCDQ96DY2 449 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 CAPZA3Q96KX2 299 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 PSTPIP2Q9H939 334 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 WTIPA6NIX2 430 aaPredicted RBP7.11□□□□□ -1.27
SNX13-213ENST00000611725 LMAN1P49257 510 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 ARID5AQ03989 594 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 AEBP2Q6ZN18 517 aaPredicted RBP7.11□□□□□ -1.27
SNX13-213ENST00000611725 HS2ST1Q7LGA3 356 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.11□□□□□ -1.27
SNX13-213ENST00000611725 PLCG1P19174 1290 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 DMTNQ08495 405 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 TCP10Q12799 353 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 SEPT12Q8IYM1 358 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 TC2NQ8N9U0 490 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 ADD3Q9UEY8 706 aaKnown RBP7.11□□□□□ -1.27
SNX13-213ENST00000611725 PCDHA12Q9UN75 941 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 VPS72Q15906 364 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 ASPRV1Q53RT3 343 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 GPIHBP1Q8IV16 184 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 ACRBPQ8NEB7 543 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 MYO1AQ9UBC5 1043 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 CCDC151A5D8V7 595 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 PDE4CQ08493 712 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 WHAMMP3Q1A5X7 153 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 KMT5BQ4FZB7 885 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 PRR5LQ6MZQ0 368 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 NELFCDQ8IXH7 590 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 SECISBP2LQ93073 1101 aaKnown RBP7.11□□□□□ -1.27
SNX13-213ENST00000611725 IRX2Q9BZI1 471 aaPredicted RBP7.11□□□□□ -1.27
SNX13-213ENST00000611725 SEPT11Q9NVA2 429 aaKnown RBP7.11□□□□□ -1.27
SNX13-213ENST00000611725 TRPC5Q9UL62 973 aaPredicted RBP7.11□□□□□ -1.27
SNX13-213ENST00000611725 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.11□□□□□ -1.27
SNX13-213ENST00000611725 CNTNAP5Q8WYK1 1306 aa7.11□□□□□ -1.27
SNX13-213ENST00000611725 CLCN6P51797 869 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 RAD51AP2Q09MP3 1159 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 BRD3Q15059 726 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 PKN1Q16512 942 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 TRMT1LQ7Z2T5 733 aaKnown RBP7.1□□□□□ -1.27
SNX13-213ENST00000611725 MYOCDQ8IZQ8 938 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 RETREG2Q8NC44 543 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 JAKMIP2Q96AA8 810 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 NLRC4Q9NPP4 1024 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 BARHL2Q9NY43 387 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 STK17AQ9UEE5 414 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 PRDM4Q9UKN5 801 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 FRMPD2Q68DX3 1309 aaPredicted RBP7.1□□□□□ -1.27
SNX13-213ENST00000611725 RPL13P26373 211 aaKnown RBP7.1□□□□□ -1.27
SNX13-213ENST00000611725 ZBED6P86452 979 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 SLFN13Q68D06 897 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 STXBP4Q6ZWJ1 553 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 C2CD5Q86YS7 1000 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 SLC35F6Q8N357 371 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 COA7Q96BR5 231 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 WDR24Q96S15 920 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 SPZ1Q9BXG8 430 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 IFIH1Q9BYX4 1025 aaKnown RBP7.1□□□□□ -1.27
SNX13-213ENST00000611725 SAR1BQ9Y6B6 198 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 ALDH1B1P30837 517 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 NOP2P46087 812 aaKnown RBP7.1□□□□□ -1.27
SNX13-213ENST00000611725 ICA1Q05084 483 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 CETN1Q12798 172 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 TAF3Q5VWG9 929 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 TOGARAM2Q6ZUX3 1019 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 SRGAP1Q7Z6B7 1085 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 CEP95Q96GE4 821 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 CCSER1Q9C0I3 900 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 B4DLN1 442 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 RASA1P20936 1047 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 CDR1P51861 262 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 DOK7Q18PE1 504 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 NBPF11Q86T75 865 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 CNOT6LQ96LI5 555 aaKnown RBP7.1□□□□□ -1.27
SNX13-213ENST00000611725 UIMC1Q96RL1 719 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 KANSL2Q9H9L4 492 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 CALCOCO1Q9P1Z2 691 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 TRIM49BA6NDI0 452 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms