RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CTCFLQ8NI51 663 aaPredicted RBP18■□□□□ 0.47
RTN1-209ENST00000611068 SUGCTQ9HAC7 445 aa18■□□□□ 0.47
RTN1-209ENST00000611068 C10orf71Q711Q0 1435 aa17.99■□□□□ 0.47
RTN1-209ENST00000611068 MPHOSPH10O00566 681 aaKnown RBP17.99■□□□□ 0.47
RTN1-209ENST00000611068 NAIF1Q69YI7 327 aaPredicted RBP17.99■□□□□ 0.47
RTN1-209ENST00000611068 C16orf86Q6ZW13 317 aa17.99■□□□□ 0.47
RTN1-209ENST00000611068 CLIC6Q96NY7 704 aa17.99■□□□□ 0.47
RTN1-209ENST00000611068 CLRN2A0PK11 232 aa17.99■□□□□ 0.47
RTN1-209ENST00000611068 PSMD14O00487 310 aa17.99■□□□□ 0.47
RTN1-209ENST00000611068 PCP11498 1178 aaKnown RBP17.99■□□□□ 0.47
RTN1-209ENST00000611068 RSRC2Q7L4I2 434 aaKnown RBP17.99■□□□□ 0.47
RTN1-209ENST00000611068 CEP95Q96GE4 821 aa17.99■□□□□ 0.47
RTN1-209ENST00000611068 PRMT6Q96LA8 375 aaPredicted RBP17.99■□□□□ 0.47
RTN1-209ENST00000611068 TMEM47Q9BQJ4 181 aa17.99■□□□□ 0.47
RTN1-209ENST00000611068 PPFIA4O75335 1185 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 ECM2O94769 699 aaPredicted RBP17.98■□□□□ 0.47
RTN1-209ENST00000611068 MYSM1Q5VVJ2 828 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 SLC16A10Q8TF71 515 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 BCS1LQ9Y276 419 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 FAM205CA6NFA0 338 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 DDTLA6NHG4 134 aaPredicted RBP17.98■□□□□ 0.47
RTN1-209ENST00000611068 ADAMTS3O15072 1205 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 AKR1B1P15121 316 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 POLD1P28340 1107 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 PKN1Q16512 942 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 C11orf91Q3C1V1 193 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 TMC6Q7Z403 805 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 MIEF2Q96C03 454 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 PIM2Q9P1W9 311 aa17.98■□□□□ 0.47
RTN1-209ENST00000611068 PAX7P23759 505 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 PPP2R3AQ06190 1150 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 SF3A1Q15459 793 aaKnown RBP17.97■□□□□ 0.47
RTN1-209ENST00000611068 HHIPL2Q6UWX4 724 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 DIS3L2Q8IYB7 885 aaKnown RBP17.97■□□□□ 0.47
RTN1-209ENST00000611068 JMYQ8N9B5 988 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 ZNF396Q96N95 335 aaPredicted RBP17.97■□□□□ 0.47
RTN1-209ENST00000611068 VAT1LQ9HCJ6 419 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 NAV1Q8NEY1 1877 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 CDK5RAP2Q96SN8 1893 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 SHTN1A0MZ66 631 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 FUT2Q10981 343 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 STK38Q15208 465 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 CFAP100Q494V2 611 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 USP17L2Q6R6M4 530 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 LRRC47Q8N1G4 583 aaKnown RBP17.97■□□□□ 0.47
RTN1-209ENST00000611068 ERCC4Q92889 916 aaPredicted RBP17.97■□□□□ 0.47
RTN1-209ENST00000611068 GPKOWQ92917 476 aaPredicted RBP eCLIP17.97■□□□□ 0.47
RTN1-209ENST00000611068 SUGT1Q9Y2Z0 365 aa17.97■□□□□ 0.47
RTN1-209ENST00000611068 DEXIO95424 95 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 SFPQP23246 707 aaKnown RBP eCLIP17.96■□□□□ 0.47
RTN1-209ENST00000611068 TMTC3Q6ZXV5 915 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.47
RTN1-209ENST00000611068 GOLPH3LQ9H4A5 285 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 LAMB1P07942 1786 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 TCP10L2B9ZVM9 353 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 NEBLO76041 1014 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
RTN1-209ENST00000611068 RTKN2Q8IZC4 609 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 AOPEPQ8N6M6 819 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 ZDHHC15Q96MV8 337 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 MTA3Q9BTC8 594 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 ZSWIM4Q9H7M6 989 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 FAM198AQ9UFP1 575 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 SERPINB13Q9UIV8 391 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 PCDHA7Q9UN72 937 aa17.96■□□□□ 0.47
RTN1-209ENST00000611068 GBP6Q6ZN66 633 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 SUPT20HQ8NEM7 779 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 RCOR1Q9UKL0 485 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 MYH1P12882 1939 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 COL4A5P29400 1685 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 FRMPD2Q68DX3 1309 aaPredicted RBP17.95■□□□□ 0.46
RTN1-209ENST00000611068 CCDC151A5D8V7 595 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 DDAH1O94760 285 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 CAVIN2O95810 425 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 MMP1P03956 469 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 BEND6Q5SZJ8 279 aaPredicted RBP17.95■□□□□ 0.46
RTN1-209ENST00000611068 GIMAP7Q8NHV1 300 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 MTFR1LQ9H019 292 aa17.95■□□□□ 0.46
RTN1-209ENST00000611068 SNED1Q8TER0 1413 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 A0A1B0GVL5 298 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 TUBB4AP04350 444 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 DALRD3Q5D0E6 543 aaKnown RBP17.94■□□□□ 0.46
RTN1-209ENST00000611068 EARS2Q5JPH6 523 aaKnown RBP17.94■□□□□ 0.46
RTN1-209ENST00000611068 RBM26Q5T8P6 1007 aaKnown RBP17.94■□□□□ 0.46
RTN1-209ENST00000611068 SH3BP5LQ7L8J4 393 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 RABGGTAQ92696 567 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 WDR24Q96S15 920 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 CABP5Q9NP86 173 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 ROBO3Q96MS0 1386 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 SLC35G1Q2M3R5 365 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 SPECC1Q5M775 1068 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 DGKHQ86XP1 1220 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 UBA5Q9GZZ9 404 aa17.94■□□□□ 0.46
RTN1-209ENST00000611068 DDX60LQ5H9U9 1706 aaKnown RBP17.94■□□□□ 0.46
RTN1-209ENST00000611068 CNTNAP5Q8WYK1 1306 aa17.93■□□□□ 0.46
RTN1-209ENST00000611068 CALM1P0DP23 149 aa17.93■□□□□ 0.46
RTN1-209ENST00000611068 CALM2P0DP24 149 aa17.93■□□□□ 0.46
RTN1-209ENST00000611068 CALM3P0DP25 149 aa17.93■□□□□ 0.46
RTN1-209ENST00000611068 DHX8Q14562 1220 aaKnown RBP17.93■□□□□ 0.46
RTN1-209ENST00000611068 STX1AQ16623 288 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms