RNA–Protein interactions for RNA: ENST00000602361.1

RMRP-201, Transcript of RNA component of mitochondrial RNA processing endoribonuclease, humanhuman

BASIC

Gene RMRP, Length 268 nt, Biotype lincRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMRP-201ENST00000602361 TSHZ3Q63HK5 1081 aa13.01□□□□□ -0.33
RMRP-201ENST00000602361 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
RMRP-201ENST00000602361 LRRC47Q8N1G4 583 aaKnown RBP13.01□□□□□ -0.33
RMRP-201ENST00000602361 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
RMRP-201ENST00000602361 EVI5LQ96CN4 794 aa13.01□□□□□ -0.33
RMRP-201ENST00000602361 RNPC3Q96LT9 517 aaKnown RBP13.01□□□□□ -0.33
RMRP-201ENST00000602361 SYNRGQ9UMZ2 1314 aa13.01□□□□□ -0.33
RMRP-201ENST00000602361 COL11A1P12107 1806 aaPredicted RBP13.01□□□□□ -0.33
RMRP-201ENST00000602361 GREB1LQ9C091 1923 aaPredicted RBP13□□□□□ -0.33
RMRP-201ENST00000602361 SNAI1O95863 264 aaPredicted RBP13□□□□□ -0.33
RMRP-201ENST00000602361 TAL1P17542 331 aaPredicted RBP13□□□□□ -0.33
RMRP-201ENST00000602361 AAMPQ13685 434 aa13□□□□□ -0.33
RMRP-201ENST00000602361 KCNA10Q16322 511 aa13□□□□□ -0.33
RMRP-201ENST00000602361 GNASQ5JWF2 1037 aa13□□□□□ -0.33
RMRP-201ENST00000602361 RCSD1Q6JBY9 416 aa13□□□□□ -0.33
RMRP-201ENST00000602361 NOL8Q76FK4 1167 aaKnown RBP13□□□□□ -0.33
RMRP-201ENST00000602361 ARMCX2Q7L311 632 aa13□□□□□ -0.33
RMRP-201ENST00000602361 KLHDC9Q8NEP7 349 aa13□□□□□ -0.33
RMRP-201ENST00000602361 PI4K2BQ8TCG2 481 aa13□□□□□ -0.33
RMRP-201ENST00000602361 MPHOSPH6Q99547 160 aaKnown RBP13□□□□□ -0.33
RMRP-201ENST00000602361 RIPK3Q9Y572 518 aa13□□□□□ -0.33
RMRP-201ENST00000602361 PLXNA1Q9UIW2 1896 aa12.99□□□□□ -0.33
RMRP-201ENST00000602361 A0A0U1RQG5 324 aaPredicted RBP12.99□□□□□ -0.33
RMRP-201ENST00000602361 TRIM43BA6NCK2 446 aa12.99□□□□□ -0.33
RMRP-201ENST00000602361 RANBP6O60518 1105 aaKnown RBP12.99□□□□□ -0.33
RMRP-201ENST00000602361 MFAP1P55081 439 aaKnown RBP12.99□□□□□ -0.33
RMRP-201ENST00000602361 GJA9P57773 515 aa12.99□□□□□ -0.33
RMRP-201ENST00000602361 PPIGQ13427 754 aaKnown RBP eCLIP12.99□□□□□ -0.33
RMRP-201ENST00000602361 CCDC144BQ3MJ40 725 aa12.99□□□□□ -0.33
RMRP-201ENST00000602361 TMEM199Q8N511 208 aa12.99□□□□□ -0.33
RMRP-201ENST00000602361 TRIM43Q96BQ3 446 aaPredicted RBP12.99□□□□□ -0.33
RMRP-201ENST00000602361 AP5M1Q9H0R1 490 aa12.99□□□□□ -0.33
RMRP-201ENST00000602361 MTIF3Q9H2K0 278 aaKnown RBP12.99□□□□□ -0.33
RMRP-201ENST00000602361 HELLSQ9NRZ9 838 aa12.99□□□□□ -0.33
RMRP-201ENST00000602361 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
RMRP-201ENST00000602361 RNF146Q9NTX7 359 aa12.99□□□□□ -0.33
RMRP-201ENST00000602361 ADD3Q9UEY8 706 aaKnown RBP12.99□□□□□ -0.33
RMRP-201ENST00000602361 SMCHD1A6NHR9 2005 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 LOC102724159A0A0B4J2E5 919 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.98□□□□□ -0.33
RMRP-201ENST00000602361 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.98□□□□□ -0.33
RMRP-201ENST00000602361 TIMP1P01033 207 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 ASGR1P07306 291 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 PCP11498 1178 aaKnown RBP12.98□□□□□ -0.33
RMRP-201ENST00000602361 MCCP23508 829 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 NT5C2P49902 561 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 TNFAIP2Q03169 654 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 PWP2Q15269 919 aaKnown RBP12.98□□□□□ -0.33
RMRP-201ENST00000602361 C9orf50Q5SZB4 431 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 ANKRD45Q5TZF3 282 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 CCDC144CPQ8IYA2 1237 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 DCAF4Q8WV16 495 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 UPF3AQ9H1J1 476 aaKnown RBP12.98□□□□□ -0.33
RMRP-201ENST00000602361 TOMM22Q9NS69 142 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 ANAPC4Q9UJX5 808 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 MYH4Q9Y623 1939 aa12.98□□□□□ -0.33
RMRP-201ENST00000602361 B4DLN1 442 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 ARVCFO00192 962 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 ORC4O43929 436 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 ALAS1P13196 640 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 MRPL12P52815 198 aaKnown RBP12.97□□□□□ -0.33
RMRP-201ENST00000602361 FAAP100Q0VG06 881 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 ALX1Q15699 326 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 MFSD5Q6N075 450 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.97□□□□□ -0.33
RMRP-201ENST00000602361 FAM133AQ8N9E0 248 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 SEC62Q99442 399 aaKnown RBP12.97□□□□□ -0.33
RMRP-201ENST00000602361 SEMA6BQ9H3T3 888 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 Q9Y3F1 56 aa12.97□□□□□ -0.33
RMRP-201ENST00000602361 NKX3-2P78367 333 aa12.96□□□□□ -0.33
RMRP-201ENST00000602361 CCDC96Q2M329 555 aa12.96□□□□□ -0.33
RMRP-201ENST00000602361 BRDTQ58F21 947 aaPredicted RBP12.96□□□□□ -0.33
RMRP-201ENST00000602361 IQSEC1Q6DN90 963 aa12.96□□□□□ -0.33
RMRP-201ENST00000602361 CCSAPQ6IQ19 270 aaPredicted RBP12.96□□□□□ -0.33
RMRP-201ENST00000602361 PSRC1Q6PGN9 363 aaPredicted RBP12.96□□□□□ -0.33
RMRP-201ENST00000602361 GUCD1Q96NT3 240 aa12.96□□□□□ -0.33
RMRP-201ENST00000602361 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.33
RMRP-201ENST00000602361 RNF41Q9H4P4 317 aaPredicted RBP12.96□□□□□ -0.33
RMRP-201ENST00000602361 A1CFQ9NQ94 594 aaKnown RBP12.96□□□□□ -0.33
RMRP-201ENST00000602361 CCPG1Q9ULG6 757 aa12.96□□□□□ -0.33
RMRP-201ENST00000602361 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
RMRP-201ENST00000602361 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
RMRP-201ENST00000602361 LTBP2Q14767 1821 aa12.96□□□□□ -0.33
RMRP-201ENST00000602361 ICAM1P05362 532 aa12.95□□□□□ -0.34
RMRP-201ENST00000602361 TOP1P11387 765 aaKnown RBP12.95□□□□□ -0.34
RMRP-201ENST00000602361 RRP1P56182 461 aaKnown RBP12.95□□□□□ -0.34
RMRP-201ENST00000602361 MCMDC2Q4G0Z9 681 aa12.95□□□□□ -0.34
RMRP-201ENST00000602361 CCDC178Q5BJE1 867 aa12.95□□□□□ -0.34
RMRP-201ENST00000602361 KCTD1Q719H9 257 aa12.95□□□□□ -0.34
RMRP-201ENST00000602361 MAFAQ8NHW3 353 aaPredicted RBP12.95□□□□□ -0.34
RMRP-201ENST00000602361 LENG1Q96BZ8 264 aaPredicted RBP12.95□□□□□ -0.34
RMRP-201ENST00000602361 AGBL1Q96MI9 1066 aa12.95□□□□□ -0.34
RMRP-201ENST00000602361 TTC14Q96N46 770 aa12.95□□□□□ -0.34
RMRP-201ENST00000602361 VTA1Q9NP79 307 aa12.95□□□□□ -0.34
RMRP-201ENST00000602361 TBX21Q9UL17 535 aa12.95□□□□□ -0.34
RMRP-201ENST00000602361 PRR12Q9ULL5 1215 aa12.95□□□□□ -0.34
RMRP-201ENST00000602361 DNAH12Q6ZR08 3092 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms