RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 FRMPD3Q5JV73 1810 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 ATP2A1O14983 1001 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 COBLO75128 1261 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 PGK2P07205 417 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 PRKAR2AP13861 404 aaKnown RBP14.96□□□□□ -0.01
USE1-209ENST00000601592 TAL1P17542 331 aaPredicted RBP14.96□□□□□ -0.01
USE1-209ENST00000601592 MFSD14CQ5VZR4 134 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 BTNL9Q6UXG8 535 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 ABRAQ8N0Z2 381 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 ANKRD35Q8N283 1001 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 DDX11Q96FC9 970 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 LRRC2Q9BYS8 371 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 RANBP17Q9H2T7 1088 aaKnown RBP14.96□□□□□ -0.01
USE1-209ENST00000601592 RNF146Q9NTX7 359 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 FLRT1Q9NZU1 646 aa14.96□□□□□ -0.01
USE1-209ENST00000601592 ZNF536O15090 1300 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 EN2P19622 333 aaPredicted RBP14.95□□□□□ -0.02
USE1-209ENST00000601592 KRT32Q14532 448 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 CATIPQ7Z7H3 387 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 RASEFQ8IZ41 740 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 CHST13Q8NET6 341 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 NUP133Q8WUM0 1156 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 TRERF1Q96PN7 1200 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 NEK1Q96PY6 1258 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.95□□□□□ -0.02
USE1-209ENST00000601592 ACAD9Q9H845 621 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 VAT1LQ9HCJ6 419 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 HMX1Q9NP08 348 aaPredicted RBP14.95□□□□□ -0.02
USE1-209ENST00000601592 GPHNQ9NQX3 736 aaPredicted RBP14.95□□□□□ -0.02
USE1-209ENST00000601592 FBXO40Q9UH90 709 aa14.95□□□□□ -0.02
USE1-209ENST00000601592 CCDC69A6NI79 296 aa14.94□□□□□ -0.02
USE1-209ENST00000601592 ICAM1P05362 532 aa14.94□□□□□ -0.02
USE1-209ENST00000601592 HOXC6P09630 235 aa14.94□□□□□ -0.02
USE1-209ENST00000601592 CYP2C19P33261 490 aa14.94□□□□□ -0.02
USE1-209ENST00000601592 CACNB2Q08289 660 aaPredicted RBP14.94□□□□□ -0.02
USE1-209ENST00000601592 COL9A3Q14050 684 aaPredicted RBP14.94□□□□□ -0.02
USE1-209ENST00000601592 STAG2Q8N3U4 1231 aa14.94□□□□□ -0.02
USE1-209ENST00000601592 IGDCC4Q8TDY8 1250 aa14.94□□□□□ -0.02
USE1-209ENST00000601592 TMEM87BQ96K49 555 aa14.94□□□□□ -0.02
USE1-209ENST00000601592 DEFB118Q96PH6 123 aa14.94□□□□□ -0.02
USE1-209ENST00000601592 LY9Q9HBG7 655 aa14.94□□□□□ -0.02
USE1-209ENST00000601592 LCTP09848 1927 aa14.94□□□□□ -0.02
USE1-209ENST00000601592 RPTORQ8N122 1335 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 SH2B2O14492 632 aaPredicted RBP14.93□□□□□ -0.02
USE1-209ENST00000601592 GJB1P08034 283 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 CNGA1P29973 690 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 CDC37Q16543 378 aaPredicted RBP14.93□□□□□ -0.02
USE1-209ENST00000601592 TKFCQ3LXA3 575 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 ADCK5Q3MIX3 580 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 USH1GQ495M9 461 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 ADGRF4Q8IZF3 695 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 ZNF654Q8IZM8 581 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 MAML3Q96JK9 1138 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 TCEANC2Q96MN5 208 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 JAKMIP1Q96N16 626 aaKnown RBP14.93□□□□□ -0.02
USE1-209ENST00000601592 MYL10Q9BUA6 226 aa14.93□□□□□ -0.02
USE1-209ENST00000601592 KLRF2D3W0D1 207 aa14.92□□□□□ -0.02
USE1-209ENST00000601592 CCND3P30281 292 aaPredicted RBP14.92□□□□□ -0.02
USE1-209ENST00000601592 HSPA4P34932 840 aa14.92□□□□□ -0.02
USE1-209ENST00000601592 FGD1P98174 961 aa14.92□□□□□ -0.02
USE1-209ENST00000601592 MLLT1Q03111 559 aaPredicted RBP14.92□□□□□ -0.02
USE1-209ENST00000601592 GRM4Q14833 912 aa14.92□□□□□ -0.02
USE1-209ENST00000601592 MUM1L1Q5H9M0 696 aa14.92□□□□□ -0.02
USE1-209ENST00000601592 OLFML2BQ68BL8 750 aa14.92□□□□□ -0.02
USE1-209ENST00000601592 NSMFQ6X4W1 530 aa14.92□□□□□ -0.02
USE1-209ENST00000601592 RAB11FIP4Q86YS3 637 aa14.92□□□□□ -0.02
USE1-209ENST00000601592 U2AF1L4Q8WU68 220 aaKnown RBP14.92□□□□□ -0.02
USE1-209ENST00000601592 MAD2L2Q9UI95 211 aa14.92□□□□□ -0.02
USE1-209ENST00000601592 SNX14Q9Y5W7 946 aa14.92□□□□□ -0.02
USE1-209ENST00000601592 BRCA2P51587 3418 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 POTEB2H3BUK9 544 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 TFRCP02786 760 aaKnown RBP14.91□□□□□ -0.02
USE1-209ENST00000601592 RXRAP19793 462 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 ZNF792Q3KQV3 632 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 TSGA10IPQ3SY00 556 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 MAP3K21Q5TCX8 1036 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 DHX32Q7L7V1 743 aaKnown RBP14.91□□□□□ -0.02
USE1-209ENST00000601592 HOMER1Q86YM7 354 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 CCDC144CPQ8IYA2 1237 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 TMTC2Q8N394 836 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 CTCFLQ8NI51 663 aaPredicted RBP14.91□□□□□ -0.02
USE1-209ENST00000601592 MTA3Q9BTC8 594 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 A1CFQ9NQ94 594 aaKnown RBP14.91□□□□□ -0.02
USE1-209ENST00000601592 PAK6Q9NQU5 681 aaPredicted RBP14.91□□□□□ -0.02
USE1-209ENST00000601592 PNMA2Q9UL42 364 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 NAP1L2Q9ULW6 460 aaPredicted RBP14.91□□□□□ -0.02
USE1-209ENST00000601592 PFASO15067 1338 aa14.91□□□□□ -0.02
USE1-209ENST00000601592 PTPDC1A2A3K4 754 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 PALM3A6NDB9 673 aaPredicted RBP14.9□□□□□ -0.02
USE1-209ENST00000601592 DDAH1O94760 285 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 SGPL1O95470 568 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 HMGB1P09429 215 aaKnown RBP14.9□□□□□ -0.02
USE1-209ENST00000601592 CPA1P15085 419 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 GJA8P48165 433 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 RGS19P49795 217 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 TROAPQ12815 778 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 QRICH1Q2TAL8 776 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 BLOC1S2Q6QNY1 142 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 SYNE3Q6ZMZ3 975 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 PIBF1Q8WXW3 757 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms