RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 CCDC174Q6PII3 467 aa16.71■□□□□ 0.27
PSMC4-205ENST00000601194 CHST13Q8NET6 341 aa16.71■□□□□ 0.27
PSMC4-205ENST00000601194 IGDCC4Q8TDY8 1250 aa16.71■□□□□ 0.27
PSMC4-205ENST00000601194 FBXO40Q9UH90 709 aa16.71■□□□□ 0.27
PSMC4-205ENST00000601194 RPTORQ8N122 1335 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 PRC1O43663 620 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 ICAM1P05362 532 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 PGK2P07205 417 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 MCM5P33992 734 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 GJA8P48165 433 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 CACNB2Q08289 660 aaPredicted RBP16.7■□□□□ 0.26
PSMC4-205ENST00000601194 WTAPQ15007 396 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 TSGA10IPQ3SY00 556 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 RASEFQ8IZ41 740 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 SHISA4Q96DD7 197 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 MTA3Q9BTC8 594 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.7■□□□□ 0.26
PSMC4-205ENST00000601194 CPVLQ9H3G5 476 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 HOMER2Q9NSB8 354 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 SLC5A4Q9NY91 659 aa16.7■□□□□ 0.26
PSMC4-205ENST00000601194 DNAJC25-GNG10A0A024R161 153 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 REC8O95072 547 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 PARP1P09874 1014 aaKnown RBP16.69■□□□□ 0.26
PSMC4-205ENST00000601194 TAL1P17542 331 aaPredicted RBP16.69■□□□□ 0.26
PSMC4-205ENST00000601194 CYP2C19P33261 490 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 ZNF792Q3KQV3 632 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 TKFCQ3LXA3 575 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 MFSD14CQ5VZR4 134 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 U2AF1L4Q8WU68 220 aaKnown RBP16.69■□□□□ 0.26
PSMC4-205ENST00000601194 KCNB2Q92953 911 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 MAML3Q96JK9 1138 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 UBA5Q9GZZ9 404 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 ACAD9Q9H845 621 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 LY9Q9HBG7 655 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 HMX1Q9NP08 348 aaPredicted RBP16.69■□□□□ 0.26
PSMC4-205ENST00000601194 GPHNQ9NQX3 736 aaPredicted RBP16.69■□□□□ 0.26
PSMC4-205ENST00000601194 RNF146Q9NTX7 359 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 CCPG1Q9ULG6 757 aa16.69■□□□□ 0.26
PSMC4-205ENST00000601194 TNRC18O15417 2968 aaPredicted RBP16.68■□□□□ 0.26
PSMC4-205ENST00000601194 SH2B2O14492 632 aaPredicted RBP16.68■□□□□ 0.26
PSMC4-205ENST00000601194 ALAS1P13196 640 aa16.68■□□□□ 0.26
PSMC4-205ENST00000601194 TROAPQ12815 778 aa16.68■□□□□ 0.26
PSMC4-205ENST00000601194 STAG2Q8N3U4 1231 aa16.68■□□□□ 0.26
PSMC4-205ENST00000601194 TMEM87BQ96K49 555 aa16.68■□□□□ 0.26
PSMC4-205ENST00000601194 DEFB118Q96PH6 123 aa16.68■□□□□ 0.26
PSMC4-205ENST00000601194 TRERF1Q96PN7 1200 aa16.68■□□□□ 0.26
PSMC4-205ENST00000601194 MAD2L2Q9UI95 211 aa16.68■□□□□ 0.26
PSMC4-205ENST00000601194 DIS3Q9Y2L1 958 aaKnown RBP16.68■□□□□ 0.26
PSMC4-205ENST00000601194 WDR19Q8NEZ3 1342 aa16.68■□□□□ 0.26
PSMC4-205ENST00000601194 PALM3A6NDB9 673 aaPredicted RBP16.67■□□□□ 0.26
PSMC4-205ENST00000601194 SGPL1O95470 568 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 HSPA4P34932 840 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 MLLT1Q03111 559 aaPredicted RBP16.67■□□□□ 0.26
PSMC4-205ENST00000601194 KRT32Q14532 448 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 GRM4Q14833 912 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 ADCK5Q3MIX3 580 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 MUM1L1Q5H9M0 696 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 ADGRF4Q8IZF3 695 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 ANKRD35Q8N283 1001 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 DDX11Q96FC9 970 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 NEK1Q96PY6 1258 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 CRISPLD2Q9H0B8 497 aa16.67■□□□□ 0.26
PSMC4-205ENST00000601194 A1CFQ9NQ94 594 aaKnown RBP16.67■□□□□ 0.26
PSMC4-205ENST00000601194 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
PSMC4-205ENST00000601194 CYBAP13498 195 aa16.66■□□□□ 0.26
PSMC4-205ENST00000601194 CCND3P30281 292 aaPredicted RBP16.66■□□□□ 0.26
PSMC4-205ENST00000601194 CATIPQ7Z7H3 387 aa16.66■□□□□ 0.26
PSMC4-205ENST00000601194 TRPV1Q8NER1 839 aa16.66■□□□□ 0.26
PSMC4-205ENST00000601194 PNMA2Q9UL42 364 aa16.66■□□□□ 0.26
PSMC4-205ENST00000601194 EPB41L2O43491 1005 aaKnown RBP16.65■□□□□ 0.26
PSMC4-205ENST00000601194 LIFRP42702 1097 aa16.65■□□□□ 0.26
PSMC4-205ENST00000601194 EXOSC10Q01780 885 aaKnown RBP16.65■□□□□ 0.26
PSMC4-205ENST00000601194 CDC37Q16543 378 aaPredicted RBP16.65■□□□□ 0.26
PSMC4-205ENST00000601194 SLC35G1Q2M3R5 365 aa16.65■□□□□ 0.26
PSMC4-205ENST00000601194 ZNF654Q8IZM8 581 aa16.65■□□□□ 0.26
PSMC4-205ENST00000601194 TMTC2Q8N394 836 aa16.65■□□□□ 0.26
PSMC4-205ENST00000601194 FGD4Q96M96 766 aa16.65■□□□□ 0.26
PSMC4-205ENST00000601194 TINF2Q9BSI4 451 aa16.65■□□□□ 0.26
PSMC4-205ENST00000601194 LRRC2Q9BYS8 371 aa16.65■□□□□ 0.26
PSMC4-205ENST00000601194 JMJD4Q9H9V9 463 aa16.65■□□□□ 0.26
PSMC4-205ENST00000601194 PFASO15067 1338 aa16.65■□□□□ 0.26
PSMC4-205ENST00000601194 ZNFX1Q9P2E3 1918 aaKnown RBP16.64■□□□□ 0.26
PSMC4-205ENST00000601194 NFIBO00712 420 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 DDAH1O94760 285 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 CAPN2P17655 700 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 DHX32Q7L7V1 743 aaKnown RBP16.64■□□□□ 0.25
PSMC4-205ENST00000601194 UBE2Q1Q7Z7E8 422 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
PSMC4-205ENST00000601194 SGMS1Q86VZ5 419 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 MSL3Q8N5Y2 521 aaKnown RBP16.64■□□□□ 0.25
PSMC4-205ENST00000601194 FAM133AQ8N9E0 248 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 CLEC4DQ8WXI8 215 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 MAP3K14Q99558 947 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 MYL10Q9BUA6 226 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 CYP39A1Q9NYL5 469 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 SNX14Q9Y5W7 946 aa16.64■□□□□ 0.25
PSMC4-205ENST00000601194 POTEB2H3BUK9 544 aa16.63■□□□□ 0.25
PSMC4-205ENST00000601194 DHX16O60231 1041 aaKnown RBP16.63■□□□□ 0.25
PSMC4-205ENST00000601194 TFRCP02786 760 aaKnown RBP16.63■□□□□ 0.25
PSMC4-205ENST00000601194 CNTN2Q02246 1040 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms