RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 RANBP17Q9H2T7 1088 aaKnown RBP15.8■□□□□ 0.12
ARHGEF1-222ENST00000600517 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
ARHGEF1-222ENST00000600517 LAMA4Q16363 1823 aa15.8■□□□□ 0.12
ARHGEF1-222ENST00000600517 ZNF236Q9UL36 1845 aa15.8■□□□□ 0.12
ARHGEF1-222ENST00000600517 CDC45O75419 566 aa15.79■□□□□ 0.12
ARHGEF1-222ENST00000600517 SNAP25P60880 206 aa15.79■□□□□ 0.12
ARHGEF1-222ENST00000600517 NECTIN1Q15223 517 aa15.79■□□□□ 0.12
ARHGEF1-222ENST00000600517 STOX1Q6ZVD7 989 aa15.79■□□□□ 0.12
ARHGEF1-222ENST00000600517 ANKRD35Q8N283 1001 aa15.79■□□□□ 0.12
ARHGEF1-222ENST00000600517 ANKLE1Q8NAG6 615 aa15.79■□□□□ 0.12
ARHGEF1-222ENST00000600517 TRPV1Q8NER1 839 aa15.79■□□□□ 0.12
ARHGEF1-222ENST00000600517 NCOA7Q8NI08 942 aa15.79■□□□□ 0.12
ARHGEF1-222ENST00000600517 OGDHLQ9ULD0 1010 aa15.79■□□□□ 0.12
ARHGEF1-222ENST00000600517 FARP2O94887 1054 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 ICAM1P05362 532 aa15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 CYBAP13498 195 aa15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 IFIT1BQ5T764 474 aaKnown RBP15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 CCDC174Q6PII3 467 aa15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 CASC1Q6TDU7 716 aa15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 RALYLQ86SE5 291 aaKnown RBP15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 TRERF1Q96PN7 1200 aa15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 TINF2Q9BSI4 451 aa15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 ACAD9Q9H845 621 aa15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 ANO2Q9NQ90 1003 aa15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 PDE4DIPQ5VU43 2346 aa15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 COL11A1P12107 1806 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF1-222ENST00000600517 SLC27A2O14975 620 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 MSCO60682 206 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 GOLGA8HP0CJ92 632 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 ALAS1P13196 640 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 CNGA1P29973 690 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 PRAMEF19Q5SWL8 479 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 MSL3Q8N5Y2 521 aaKnown RBP15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 HOMER2Q9NSB8 354 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 RNF146Q9NTX7 359 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 NRBP1Q9UHY1 535 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 PNMA2Q9UL42 364 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 CCPG1Q9ULG6 757 aa15.77■□□□□ 0.12
ARHGEF1-222ENST00000600517 IFIT3O14879 490 aaKnown RBP15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 MNX1P50219 401 aaPredicted RBP15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 ASPRV1Q53RT3 343 aa15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 CREB3L3Q68CJ9 461 aa15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 MAMDC4Q6UXC1 1216 aa15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 ZNF467Q7Z7K2 595 aaPredicted RBP15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 MB21D2Q8IYB1 491 aaPredicted RBP15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 IGDCC4Q8TDY8 1250 aa15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 PAWRQ96IZ0 340 aaKnown RBP15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 UBA5Q9GZZ9 404 aa15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 A1CFQ9NQ94 594 aaKnown RBP15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 DDX20Q9UHI6 824 aaKnown RBP15.76■□□□□ 0.11
ARHGEF1-222ENST00000600517 ERICH2A1L162 156 aa15.75■□□□□ 0.11
ARHGEF1-222ENST00000600517 SEPT4O43236 478 aa15.75■□□□□ 0.11
ARHGEF1-222ENST00000600517 PARP1P09874 1014 aaKnown RBP15.75■□□□□ 0.11
ARHGEF1-222ENST00000600517 ANTXR2P58335 489 aa15.75■□□□□ 0.11
ARHGEF1-222ENST00000600517 CHST3Q7LGC8 479 aa15.75■□□□□ 0.11
ARHGEF1-222ENST00000600517 MTA3Q9BTC8 594 aa15.75■□□□□ 0.11
ARHGEF1-222ENST00000600517 HTATIP2Q9BUP3 242 aa15.75■□□□□ 0.11
ARHGEF1-222ENST00000600517 PFASO15067 1338 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 WDR19Q8NEZ3 1342 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 POTEB2H3BUK9 544 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 SNAI1O95863 264 aaPredicted RBP15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 WTAPQ15007 396 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 SART3Q15020 963 aaKnown RBP15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 MUM1L1Q5H9M0 696 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 NECAB2Q7Z6G3 386 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 ADGRF4Q8IZF3 695 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 FAM133AQ8N9E0 248 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 FGD4Q96M96 766 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 CPVLQ9H3G5 476 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 SENP2Q9HC62 589 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 CYP39A1Q9NYL5 469 aa15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 MKI67P46013 3256 aaKnown RBP15.74■□□□□ 0.11
ARHGEF1-222ENST00000600517 SYNGAP1Q96PV0 1343 aa15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 PALM3A6NDB9 673 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 ZNF865P0CJ78 1059 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 TAL1P17542 331 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 CNTN2Q02246 1040 aa15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 TMEM67Q5HYA8 995 aa15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 PRPF38BQ5VTL8 546 aaKnown RBP15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 RNF20Q5VTR2 975 aa15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 DIS3LQ8TF46 1054 aaKnown RBP15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 JMJD4Q9H9V9 463 aa15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 MAD2L2Q9UI95 211 aa15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 CNPY2Q9Y2B0 182 aa15.73■□□□□ 0.11
ARHGEF1-222ENST00000600517 SOWAHBA6NEL2 793 aa15.72■□□□□ 0.11
ARHGEF1-222ENST00000600517 KLRF2D3W0D1 207 aa15.72■□□□□ 0.11
ARHGEF1-222ENST00000600517 PRC1O43663 620 aa15.72■□□□□ 0.11
ARHGEF1-222ENST00000600517 COL6A1P12109 1028 aa15.72■□□□□ 0.11
ARHGEF1-222ENST00000600517 MCM5P33992 734 aa15.72■□□□□ 0.11
ARHGEF1-222ENST00000600517 TROAPQ12815 778 aa15.72■□□□□ 0.11
ARHGEF1-222ENST00000600517 TSGA10IPQ3SY00 556 aa15.72■□□□□ 0.11
ARHGEF1-222ENST00000600517 STAG2Q8N3U4 1231 aa15.72■□□□□ 0.11
ARHGEF1-222ENST00000600517 CLEC4DQ8WXI8 215 aa15.72■□□□□ 0.11
ARHGEF1-222ENST00000600517 ZNFX1Q9P2E3 1918 aaKnown RBP15.71■□□□□ 0.11
ARHGEF1-222ENST00000600517 NFIBO00712 420 aa15.71■□□□□ 0.11
ARHGEF1-222ENST00000600517 COL9A3Q14050 684 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF1-222ENST00000600517 GRM4Q14833 912 aa15.71■□□□□ 0.11
ARHGEF1-222ENST00000600517 CDC37Q16543 378 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF1-222ENST00000600517 NSMFQ6X4W1 530 aa15.71■□□□□ 0.11
ARHGEF1-222ENST00000600517 TMTC2Q8N394 836 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms