RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 PNMA1Q8ND90 353 aa11.39□□□□□ -0.59
VRK3-215ENST00000599138 AGBL1Q96MI9 1066 aa11.39□□□□□ -0.59
VRK3-215ENST00000599138 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
VRK3-215ENST00000599138 MTMR7Q9Y216 660 aa11.39□□□□□ -0.59
VRK3-215ENST00000599138 CTDP1Q9Y5B0 961 aaPredicted RBP11.39□□□□□ -0.59
VRK3-215ENST00000599138 RBM8AQ9Y5S9 174 aaKnown RBP11.39□□□□□ -0.59
VRK3-215ENST00000599138 MCM3APO60318 1980 aa11.39□□□□□ -0.59
VRK3-215ENST00000599138 FRMPD3Q5JV73 1810 aa11.39□□□□□ -0.59
VRK3-215ENST00000599138 BAZ2BQ9UIF8 2168 aaKnown RBP11.38□□□□□ -0.59
VRK3-215ENST00000599138 FRMPD2Q68DX3 1309 aaPredicted RBP11.38□□□□□ -0.59
VRK3-215ENST00000599138 E7EWF7 191 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 ICAM1P05362 532 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 SLC16A2P36021 539 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 SNAP25P60880 206 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 TRDNQ13061 729 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 GPATCH4Q5T3I0 446 aaKnown RBP11.38□□□□□ -0.59
VRK3-215ENST00000599138 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
VRK3-215ENST00000599138 MAMDC4Q6UXC1 1216 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 KIAA1211Q6ZU35 1233 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 MSL3Q8N5Y2 521 aaKnown RBP11.38□□□□□ -0.59
VRK3-215ENST00000599138 FGD4Q96M96 766 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 TINF2Q9BSI4 451 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 UBAC1Q9BSL1 405 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 ACAD9Q9H845 621 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 KAT14Q9H8E8 782 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 GPCPD1Q9NPB8 672 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 NRBP1Q9UHY1 535 aa11.38□□□□□ -0.59
VRK3-215ENST00000599138 MSCO60682 206 aa11.37□□□□□ -0.59
VRK3-215ENST00000599138 NECTIN1Q15223 517 aa11.37□□□□□ -0.59
VRK3-215ENST00000599138 CCDC174Q6PII3 467 aa11.37□□□□□ -0.59
VRK3-215ENST00000599138 ZNF467Q7Z7K2 595 aaPredicted RBP11.37□□□□□ -0.59
VRK3-215ENST00000599138 MB21D2Q8IYB1 491 aaPredicted RBP11.37□□□□□ -0.59
VRK3-215ENST00000599138 FAM133AQ8N9E0 248 aa11.37□□□□□ -0.59
VRK3-215ENST00000599138 NCOA7Q8NI08 942 aa11.37□□□□□ -0.59
VRK3-215ENST00000599138 DIS3LQ8TF46 1054 aaKnown RBP11.37□□□□□ -0.59
VRK3-215ENST00000599138 DDX11Q96FC9 970 aa11.37□□□□□ -0.59
VRK3-215ENST00000599138 TRERF1Q96PN7 1200 aa11.37□□□□□ -0.59
VRK3-215ENST00000599138 A1CFQ9NQ94 594 aaKnown RBP11.37□□□□□ -0.59
VRK3-215ENST00000599138 RNF146Q9NTX7 359 aa11.37□□□□□ -0.59
VRK3-215ENST00000599138 DDX20Q9UHI6 824 aaKnown RBP11.37□□□□□ -0.59
VRK3-215ENST00000599138 ALPK3Q96L96 1907 aa11.37□□□□□ -0.59
VRK3-215ENST00000599138 SYNGAP1Q96PV0 1343 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 SEPT4O43236 478 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 CDC45O75419 566 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 GOLGA8HP0CJ92 632 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 COL6A1P12109 1028 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 ALAS1P13196 640 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 ANTXR2P58335 489 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 ASPRV1Q53RT3 343 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 MUM1L1Q5H9M0 696 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 PRAMEF19Q5SWL8 479 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 IFIT1BQ5T764 474 aaKnown RBP11.36□□□□□ -0.59
VRK3-215ENST00000599138 ANKRD35Q8N283 1001 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 PAWRQ96IZ0 340 aaKnown RBP11.36□□□□□ -0.59
VRK3-215ENST00000599138 HOMER2Q9NSB8 354 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 PNMA2Q9UL42 364 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 CCPG1Q9ULG6 757 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 LCTP09848 1927 aa11.36□□□□□ -0.59
VRK3-215ENST00000599138 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 RANBP2P49792 3224 aaKnown RBP11.35□□□□□ -0.59
VRK3-215ENST00000599138 MYH6P13533 1939 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 SLC27A2O14975 620 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 SNAI1O95863 264 aaPredicted RBP11.35□□□□□ -0.59
VRK3-215ENST00000599138 CENPBP07199 599 aaPredicted RBP11.35□□□□□ -0.59
VRK3-215ENST00000599138 ZNF865P0CJ78 1059 aaPredicted RBP11.35□□□□□ -0.59
VRK3-215ENST00000599138 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
VRK3-215ENST00000599138 CREB3L3Q68CJ9 461 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 NECAB2Q7Z6G3 386 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 RALYLQ86SE5 291 aaKnown RBP11.35□□□□□ -0.59
VRK3-215ENST00000599138 IGDCC4Q8TDY8 1250 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 MTA3Q9BTC8 594 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 HTATIP2Q9BUP3 242 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 UBA5Q9GZZ9 404 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 CPVLQ9H3G5 476 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 SENP2Q9HC62 589 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 ANO2Q9NQ90 1003 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 PPP4R2Q9NY27 417 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 CYP39A1Q9NYL5 469 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 PFASO15067 1338 aa11.35□□□□□ -0.59
VRK3-215ENST00000599138 PALM3A6NDB9 673 aaPredicted RBP11.34□□□□□ -0.59
VRK3-215ENST00000599138 SOWAHBA6NEL2 793 aa11.34□□□□□ -0.59
VRK3-215ENST00000599138 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
VRK3-215ENST00000599138 IFIT3O14879 490 aaKnown RBP11.34□□□□□ -0.59
VRK3-215ENST00000599138 PARP1P09874 1014 aaKnown RBP11.34□□□□□ -0.59
VRK3-215ENST00000599138 CNGA1P29973 690 aa11.34□□□□□ -0.59
VRK3-215ENST00000599138 CNTN2Q02246 1040 aa11.34□□□□□ -0.59
VRK3-215ENST00000599138 TROAPQ12815 778 aa11.34□□□□□ -0.59
VRK3-215ENST00000599138 COL9A3Q14050 684 aaPredicted RBP11.34□□□□□ -0.59
VRK3-215ENST00000599138 ADGRF4Q8IZF3 695 aa11.34□□□□□ -0.59
VRK3-215ENST00000599138 CLEC4DQ8WXI8 215 aa11.34□□□□□ -0.59
VRK3-215ENST00000599138 MAD2L2Q9UI95 211 aa11.34□□□□□ -0.59
VRK3-215ENST00000599138 ASTN1O14525 1302 aa11.34□□□□□ -0.59
VRK3-215ENST00000599138 NFIBO00712 420 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 GRM4Q14833 912 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 WTAPQ15007 396 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 SART3Q15020 963 aaKnown RBP11.33□□□□□ -0.6
VRK3-215ENST00000599138 SLC35G1Q2M3R5 365 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 TSGA10IPQ3SY00 556 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 CASC1Q6TDU7 716 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms