RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 ICAM1P05362 532 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 HMGB1P09429 215 aaKnown RBP17.49■□□□□ 0.39
IRF3-211ENST00000596644 ALAS1P13196 640 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 CCL14Q16627 93 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 TKFCQ3LXA3 575 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 ADCK5Q3MIX3 580 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 TMTC2Q8N394 836 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 CHST13Q8NET6 341 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 KCNB2Q92953 911 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 LRRC2Q9BYS8 371 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 CPVLQ9H3G5 476 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 GPHNQ9NQX3 736 aaPredicted RBP17.49■□□□□ 0.39
IRF3-211ENST00000596644 RNF146Q9NTX7 359 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 SNX14Q9Y5W7 946 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 HTTP42858 3142 aa17.49■□□□□ 0.39
IRF3-211ENST00000596644 WDR19Q8NEZ3 1342 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 HOXC6P09630 235 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 COL9A3Q14050 684 aaPredicted RBP17.48■□□□□ 0.39
IRF3-211ENST00000596644 GRM4Q14833 912 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 MTFR1Q15390 333 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 DHX32Q7L7V1 743 aaKnown RBP17.48■□□□□ 0.39
IRF3-211ENST00000596644 ZNF654Q8IZM8 581 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 NPLOC4Q8TAT6 608 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 NUP133Q8WUM0 1156 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
IRF3-211ENST00000596644 USP26Q9BXU7 913 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 ACAD9Q9H845 621 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 PNMA2Q9UL42 364 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 RBBP6Q7Z6E9 1792 aaKnown RBP17.48■□□□□ 0.39
IRF3-211ENST00000596644 PLXNA1Q9UIW2 1896 aa17.48■□□□□ 0.39
IRF3-211ENST00000596644 KLRF2D3W0D1 207 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 EIF5BO60841 1220 aaKnown RBP17.47■□□□□ 0.39
IRF3-211ENST00000596644 COBLO75128 1261 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 DDAH1O94760 285 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 PGK2P07205 417 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 CCL5P13501 91 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 LIFRP42702 1097 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 MFSD14CQ5VZR4 134 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 ADGRF4Q8IZF3 695 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 ANKRD35Q8N283 1001 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 STAG2Q8N3U4 1231 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 TCEANC2Q96MN5 208 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 TRERF1Q96PN7 1200 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 RNF208Q9H0X6 261 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 MAD2L2Q9UI95 211 aa17.47■□□□□ 0.39
IRF3-211ENST00000596644 PALM3A6NDB9 673 aaPredicted RBP17.46■□□□□ 0.39
IRF3-211ENST00000596644 PRKAR2AP13861 404 aaKnown RBP17.46■□□□□ 0.39
IRF3-211ENST00000596644 PSMA5P28066 241 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 FGD1P98174 961 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 TROAPQ12815 778 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 TRIM32Q13049 653 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 CDC37Q16543 378 aaPredicted RBP17.46■□□□□ 0.39
IRF3-211ENST00000596644 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 CTCFLQ8NI51 663 aaPredicted RBP17.46■□□□□ 0.39
IRF3-211ENST00000596644 MYL10Q9BUA6 226 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 UNC93B1Q9H1C4 597 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 VAT1LQ9HCJ6 419 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 FLRT1Q9NZU1 646 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 SLC12A7Q9Y666 1083 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 MYH6P13533 1939 aa17.46■□□□□ 0.39
IRF3-211ENST00000596644 CALM1P0DP23 149 aa17.45■□□□□ 0.38
IRF3-211ENST00000596644 CALM2P0DP24 149 aa17.45■□□□□ 0.38
IRF3-211ENST00000596644 CALM3P0DP25 149 aa17.45■□□□□ 0.38
IRF3-211ENST00000596644 TAL1P17542 331 aaPredicted RBP17.45■□□□□ 0.38
IRF3-211ENST00000596644 KIF5BP33176 963 aa17.45■□□□□ 0.38
IRF3-211ENST00000596644 EXOSC10Q01780 885 aaKnown RBP17.45■□□□□ 0.38
IRF3-211ENST00000596644 SYNE3Q6ZMZ3 975 aa17.45■□□□□ 0.38
IRF3-211ENST00000596644 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.45■□□□□ 0.38
IRF3-211ENST00000596644 POTEFA5A3E0 1075 aa17.44■□□□□ 0.38
IRF3-211ENST00000596644 CPA1P15085 419 aa17.44■□□□□ 0.38
IRF3-211ENST00000596644 CASTP20810 708 aaKnown RBP17.44■□□□□ 0.38
IRF3-211ENST00000596644 USH1GQ495M9 461 aa17.44■□□□□ 0.38
IRF3-211ENST00000596644 MUM1L1Q5H9M0 696 aa17.44■□□□□ 0.38
IRF3-211ENST00000596644 OLFML2BQ68BL8 750 aa17.44■□□□□ 0.38
IRF3-211ENST00000596644 MAML3Q96JK9 1138 aa17.44■□□□□ 0.38
IRF3-211ENST00000596644 MAP3K14Q99558 947 aa17.44■□□□□ 0.38
IRF3-211ENST00000596644 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.44■□□□□ 0.386e-7■■□□□ 12.6
IRF3-211ENST00000596644 JMJD4Q9H9V9 463 aa17.44■□□□□ 0.38
IRF3-211ENST00000596644 HMX1Q9NP08 348 aaPredicted RBP17.44■□□□□ 0.38
IRF3-211ENST00000596644 DIS3Q9Y2L1 958 aaKnown RBP17.44■□□□□ 0.38
IRF3-211ENST00000596644 PFASO15067 1338 aa17.44■□□□□ 0.38
IRF3-211ENST00000596644 RPTORQ8N122 1335 aa17.44■□□□□ 0.38
IRF3-211ENST00000596644 SMCHD1A6NHR9 2005 aa17.43■□□□□ 0.38
IRF3-211ENST00000596644 CYP2C19P33261 490 aa17.43■□□□□ 0.38
IRF3-211ENST00000596644 CACNB2Q08289 660 aaPredicted RBP17.43■□□□□ 0.38
IRF3-211ENST00000596644 QRICH1Q2TAL8 776 aa17.43■□□□□ 0.38
IRF3-211ENST00000596644 ZNF792Q3KQV3 632 aa17.43■□□□□ 0.38
IRF3-211ENST00000596644 MAP3K21Q5TCX8 1036 aa17.43■□□□□ 0.38
IRF3-211ENST00000596644 NSMFQ6X4W1 530 aa17.43■□□□□ 0.38
IRF3-211ENST00000596644 SGMS1Q86VZ5 419 aa17.43■□□□□ 0.38
IRF3-211ENST00000596644 MICU3Q86XE3 530 aa17.43■□□□□ 0.38
IRF3-211ENST00000596644 RAB11FIP4Q86YS3 637 aa17.43■□□□□ 0.38
IRF3-211ENST00000596644 A1CFQ9NQ94 594 aaKnown RBP17.43■□□□□ 0.38
IRF3-211ENST00000596644 KIAA0100Q14667 2235 aaKnown RBP17.42■□□□□ 0.38
IRF3-211ENST00000596644 GJB1P08034 283 aa17.42■□□□□ 0.38
IRF3-211ENST00000596644 RXRAP19793 462 aa17.42■□□□□ 0.38
IRF3-211ENST00000596644 RPS6KB1P23443 525 aa17.42■□□□□ 0.38
IRF3-211ENST00000596644 Q6ZUG5 572 aa17.42■□□□□ 0.38
IRF3-211ENST00000596644 FBXO11Q86XK2 927 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms