RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 NPLOC4Q8TAT6 608 aa17.52■□□□□ 0.4
SCN1B-204ENST00000596348 TMEM87BQ96K49 555 aa17.52■□□□□ 0.4
SCN1B-204ENST00000596348 TCEANC2Q96MN5 208 aa17.52■□□□□ 0.4
SCN1B-204ENST00000596348 MTA3Q9BTC8 594 aa17.52■□□□□ 0.4
SCN1B-204ENST00000596348 RBBP6Q7Z6E9 1792 aaKnown RBP17.51■□□□□ 0.39
SCN1B-204ENST00000596348 EPB41L2O43491 1005 aaKnown RBP17.51■□□□□ 0.39
SCN1B-204ENST00000596348 FCER1AP12319 257 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 SOX10P56693 466 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 EXOSC10Q01780 885 aaKnown RBP17.51■□□□□ 0.39
SCN1B-204ENST00000596348 KRT32Q14532 448 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 GRM4Q14833 912 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 SLC35G1Q2M3R5 365 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 MMP19Q99542 508 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 HOMER2Q9NSB8 354 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 FLRT1Q9NZU1 646 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 BIN2Q9UBW5 565 aaPredicted RBP17.51■□□□□ 0.39
SCN1B-204ENST00000596348 MAD2L2Q9UI95 211 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 PLXNA1Q9UIW2 1896 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 MYH6P13533 1939 aa17.51■□□□□ 0.39
SCN1B-204ENST00000596348 HMGCRP04035 888 aa17.5■□□□□ 0.39
SCN1B-204ENST00000596348 PGK2P07205 417 aa17.5■□□□□ 0.39
SCN1B-204ENST00000596348 CPA1P15085 419 aa17.5■□□□□ 0.39
SCN1B-204ENST00000596348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.5■□□□□ 0.39
SCN1B-204ENST00000596348 DHX32Q7L7V1 743 aaKnown RBP17.5■□□□□ 0.39
SCN1B-204ENST00000596348 ADGRF4Q8IZF3 695 aa17.5■□□□□ 0.39
SCN1B-204ENST00000596348 ZNF654Q8IZM8 581 aa17.5■□□□□ 0.39
SCN1B-204ENST00000596348 MYL10Q9BUA6 226 aa17.5■□□□□ 0.39
SCN1B-204ENST00000596348 MKI67P46013 3256 aaKnown RBP17.5■□□□□ 0.39
SCN1B-204ENST00000596348 WDR19Q8NEZ3 1342 aa17.49■□□□□ 0.39
SCN1B-204ENST00000596348 PALM3A6NDB9 673 aaPredicted RBP17.49■□□□□ 0.39
SCN1B-204ENST00000596348 IGHA2P01877 340 aa17.49■□□□□ 0.39
SCN1B-204ENST00000596348 ICAM1P05362 532 aa17.49■□□□□ 0.39
SCN1B-204ENST00000596348 LIFRP42702 1097 aa17.49■□□□□ 0.39
SCN1B-204ENST00000596348 CATIPQ7Z7H3 387 aa17.49■□□□□ 0.39
SCN1B-204ENST00000596348 JAKMIP1Q96N16 626 aaKnown RBP17.49■□□□□ 0.39
SCN1B-204ENST00000596348 UNC93B1Q9H1C4 597 aa17.49■□□□□ 0.39
SCN1B-204ENST00000596348 RNF146Q9NTX7 359 aa17.49■□□□□ 0.39
SCN1B-204ENST00000596348 CCPG1Q9ULG6 757 aa17.49■□□□□ 0.39
SCN1B-204ENST00000596348 POTEFA5A3E0 1075 aa17.48■□□□□ 0.39
SCN1B-204ENST00000596348 KLRF2D3W0D1 207 aa17.48■□□□□ 0.39
SCN1B-204ENST00000596348 ALAS1P13196 640 aa17.48■□□□□ 0.39
SCN1B-204ENST00000596348 CCL5P13501 91 aa17.48■□□□□ 0.39
SCN1B-204ENST00000596348 KCTD2Q14681 263 aa17.48■□□□□ 0.39
SCN1B-204ENST00000596348 MUM1L1Q5H9M0 696 aa17.48■□□□□ 0.39
SCN1B-204ENST00000596348 MAP3K21Q5TCX8 1036 aa17.48■□□□□ 0.39
SCN1B-204ENST00000596348 DPP9Q86TI2 863 aa17.48■□□□□ 0.39
SCN1B-204ENST00000596348 CHST13Q8NET6 341 aa17.48■□□□□ 0.39
SCN1B-204ENST00000596348 JMJD4Q9H9V9 463 aa17.48■□□□□ 0.39
SCN1B-204ENST00000596348 LCTP09848 1927 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 DNAJC25-GNG10A0A024R161 153 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 DDAH1O94760 285 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 SEC24BO95487 1268 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 UBXN2AP68543 259 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 CDC37Q16543 378 aaPredicted RBP17.47■□□□□ 0.39
SCN1B-204ENST00000596348 ZNF792Q3KQV3 632 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 TKFCQ3LXA3 575 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 NFXL1Q6ZNB6 911 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 SGMS1Q86VZ5 419 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 RAB11FIP4Q86YS3 637 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 TRMT44Q8IYL2 757 aaKnown RBP17.47■□□□□ 0.39
SCN1B-204ENST00000596348 TMTC2Q8N394 836 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 NUP133Q8WUM0 1156 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 TRERF1Q96PN7 1200 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 ACAD9Q9H845 621 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 FBXO40Q9UH90 709 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 MCM3APO60318 1980 aa17.47■□□□□ 0.39
SCN1B-204ENST00000596348 CCDC69A6NI79 296 aa17.46■□□□□ 0.39
SCN1B-204ENST00000596348 HMGB1P09429 215 aaKnown RBP17.46■□□□□ 0.39
SCN1B-204ENST00000596348 PRKAR2AP13861 404 aaKnown RBP17.46■□□□□ 0.39
SCN1B-204ENST00000596348 RXRAP19793 462 aa17.46■□□□□ 0.39
SCN1B-204ENST00000596348 CYP2C19P33261 490 aa17.46■□□□□ 0.39
SCN1B-204ENST00000596348 CACNB2Q08289 660 aaPredicted RBP17.46■□□□□ 0.39
SCN1B-204ENST00000596348 OLFML2BQ68BL8 750 aa17.46■□□□□ 0.39
SCN1B-204ENST00000596348 MTMR8Q96EF0 704 aa17.46■□□□□ 0.39
SCN1B-204ENST00000596348 MAML3Q96JK9 1138 aa17.46■□□□□ 0.39
SCN1B-204ENST00000596348 FGD4Q96M96 766 aa17.46■□□□□ 0.39
SCN1B-204ENST00000596348 RNF208Q9H0X6 261 aa17.46■□□□□ 0.39
SCN1B-204ENST00000596348 VAT1LQ9HCJ6 419 aa17.46■□□□□ 0.39
SCN1B-204ENST00000596348 A1CFQ9NQ94 594 aaKnown RBP17.46■□□□□ 0.39
SCN1B-204ENST00000596348 NFIBO00712 420 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 CYTH3O43739 400 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 DHX16O60231 1041 aaKnown RBP17.45■□□□□ 0.38
SCN1B-204ENST00000596348 CASTP20810 708 aaKnown RBP17.45■□□□□ 0.38
SCN1B-204ENST00000596348 RPS6KB1P23443 525 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 QRICH1Q2TAL8 776 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 C8orf34Q49A92 452 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 APOA5Q6Q788 366 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 BLOC1S2Q6QNY1 142 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 ANKRD35Q8N283 1001 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 CLEC4DQ8WXI8 215 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 DDX11Q96FC9 970 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 MAP3K14Q99558 947 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 TMEM106CQ9BVX2 250 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 BRPF3Q9ULD4 1205 aa17.45■□□□□ 0.38
SCN1B-204ENST00000596348 PDE4DIPQ5VU43 2346 aa17.44■□□□□ 0.38
SCN1B-204ENST00000596348 PPP1R11O60927 126 aaPredicted RBP17.44■□□□□ 0.38
SCN1B-204ENST00000596348 USH1GQ495M9 461 aa17.44■□□□□ 0.38
SCN1B-204ENST00000596348 CCDC144CPQ8IYA2 1237 aa17.44■□□□□ 0.38
SCN1B-204ENST00000596348 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCN1B-204ENST00000596348 RIOX1Q9H6W3 641 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms