RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 USP26Q9BXU7 913 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 SENP2Q9HC62 589 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 PALM3A6NDB9 673 aaPredicted RBP21.31■■□□□ 1
ZNF558-204ENST00000596172 SH2B2O14492 632 aaPredicted RBP21.31■■□□□ 1
ZNF558-204ENST00000596172 EIF5BO60841 1220 aaKnown RBP21.31■■□□□ 1
ZNF558-204ENST00000596172 COBLO75128 1261 aa21.31■■□□□ 1
ZNF558-204ENST00000596172 CAPN15O75808 1086 aa21.31■■□□□ 1
ZNF558-204ENST00000596172 COL9A3Q14050 684 aaPredicted RBP21.31■■□□□ 1
ZNF558-204ENST00000596172 ADCK5Q3MIX3 580 aa21.31■■□□□ 1
ZNF558-204ENST00000596172 TMEM106CQ9BVX2 250 aa21.31■■□□□ 1
ZNF558-204ENST00000596172 DIS3Q9Y2L1 958 aaKnown RBP21.31■■□□□ 1
ZNF558-204ENST00000596172 SNX14Q9Y5W7 946 aa21.31■■□□□ 1
ZNF558-204ENST00000596172 GRM4Q14833 912 aa21.3■■□□□ 1
ZNF558-204ENST00000596172 MTFR1Q15390 333 aa21.3■■□□□ 1
ZNF558-204ENST00000596172 MAP3K21Q5TCX8 1036 aa21.3■■□□□ 1
ZNF558-204ENST00000596172 OLFML2BQ68BL8 750 aa21.3■■□□□ 1
ZNF558-204ENST00000596172 CCDC174Q6PII3 467 aa21.3■■□□□ 1
ZNF558-204ENST00000596172 NPLOC4Q8TAT6 608 aa21.3■■□□□ 1
ZNF558-204ENST00000596172 UBA5Q9GZZ9 404 aa21.3■■□□□ 1
ZNF558-204ENST00000596172 MAD2L2Q9UI95 211 aa21.3■■□□□ 1
ZNF558-204ENST00000596172 COL11A1P12107 1806 aaPredicted RBP21.29■■□□□ 1
ZNF558-204ENST00000596172 ZNF236Q9UL36 1845 aa21.29■■□□□ 1
ZNF558-204ENST00000596172 CCL5P13501 91 aa21.29■■□□□ 1
ZNF558-204ENST00000596172 RGS19P49795 217 aa21.29■■□□□ 1
ZNF558-204ENST00000596172 SNAP25P60880 206 aa21.29■■□□□ 1
ZNF558-204ENST00000596172 CCL14Q16627 93 aa21.29■■□□□ 1
ZNF558-204ENST00000596172 SGMS1Q86VZ5 419 aa21.29■■□□□ 1
ZNF558-204ENST00000596172 ACAD9Q9H845 621 aa21.29■■□□□ 1
ZNF558-204ENST00000596172 GPHNQ9NQX3 736 aaPredicted RBP21.29■■□□□ 1
ZNF558-204ENST00000596172 CCPG1Q9ULG6 757 aa21.29■■□□□ 1
ZNF558-204ENST00000596172 DNAJC25-GNG10A0A024R161 153 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 KLRF2D3W0D1 207 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 DDAH1O94760 285 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 CAPN2P17655 700 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 SLC4A3P48751 1232 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 ZNF792Q3KQV3 632 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 ADGRF4Q8IZF3 695 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 STAG2Q8N3U4 1231 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 TRERF1Q96PN7 1200 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 RNF146Q9NTX7 359 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 FLRT1Q9NZU1 646 aa21.28■■□□□ 1
ZNF558-204ENST00000596172 CCDC69A6NI79 296 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 GJB1P08034 283 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 ALAS1P13196 640 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 SOX10P56693 466 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 MFSD14CQ5VZR4 134 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 ZNF654Q8IZM8 581 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 DDX11Q96FC9 970 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 MAML3Q96JK9 1138 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 RNF208Q9H0X6 261 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 UNC93B1Q9H1C4 597 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 CPVLQ9H3G5 476 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 JMJD4Q9H9V9 463 aa21.27■■□□□ 1
ZNF558-204ENST00000596172 RPTORQ8N122 1335 aa21.27■□□□□ 0.99
ZNF558-204ENST00000596172 PGK2P07205 417 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 CALM1P0DP23 149 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 CALM2P0DP24 149 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 CALM3P0DP25 149 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 PSMA5P28066 241 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 TRIM32Q13049 653 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 NFXL1Q6ZNB6 911 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 ANKRD35Q8N283 1001 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 FBXL16Q8N461 479 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 MTMR8Q96EF0 704 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 HMX1Q9NP08 348 aaPredicted RBP21.26■□□□□ 0.99
ZNF558-204ENST00000596172 PAK6Q9NQU5 681 aaPredicted RBP21.26■□□□□ 0.99
ZNF558-204ENST00000596172 HOMER2Q9NSB8 354 aa21.26■□□□□ 0.99
ZNF558-204ENST00000596172 POTEFA5A3E0 1075 aa21.25■□□□□ 0.99
ZNF558-204ENST00000596172 MYCP01106 439 aaPredicted RBP21.25■□□□□ 0.99
ZNF558-204ENST00000596172 PRKAR2AP13861 404 aaKnown RBP21.25■□□□□ 0.99
ZNF558-204ENST00000596172 SMARCA1P28370 1054 aa21.25■□□□□ 0.99
ZNF558-204ENST00000596172 KIF5BP33176 963 aa21.25■□□□□ 0.99
ZNF558-204ENST00000596172 CACNB2Q08289 660 aaPredicted RBP21.25■□□□□ 0.99
ZNF558-204ENST00000596172 ZNF467Q7Z7K2 595 aaPredicted RBP21.25■□□□□ 0.99
ZNF558-204ENST00000596172 MSL3Q8N5Y2 521 aaKnown RBP21.25■□□□□ 0.99
ZNF558-204ENST00000596172 JAKMIP1Q96N16 626 aaKnown RBP21.25■□□□□ 0.99
ZNF558-204ENST00000596172 LRRC2Q9BYS8 371 aa21.25■□□□□ 0.99
ZNF558-204ENST00000596172 MAF1Q9H063 256 aa21.25■□□□□ 0.99
ZNF558-204ENST00000596172 RIOX1Q9H6W3 641 aa21.25■□□□□ 0.99
ZNF558-204ENST00000596172 SLC12A7Q9Y666 1083 aa21.25■□□□□ 0.99
ZNF558-204ENST00000596172 PFASO15067 1338 aa21.25■□□□□ 0.99
ZNF558-204ENST00000596172 GJA8P48165 433 aa21.24■□□□□ 0.99
ZNF558-204ENST00000596172 CDC37Q16543 378 aaPredicted RBP21.24■□□□□ 0.99
ZNF558-204ENST00000596172 BLOC1S2Q6QNY1 142 aa21.24■□□□□ 0.99
ZNF558-204ENST00000596172 CTCFLQ8NI51 663 aaPredicted RBP21.24■□□□□ 0.99
ZNF558-204ENST00000596172 LZTS2Q9BRK4 669 aa21.24■□□□□ 0.99
ZNF558-204ENST00000596172 TM6SF1Q9BZW5 370 aa21.24■□□□□ 0.99
ZNF558-204ENST00000596172 A1CFQ9NQ94 594 aaKnown RBP21.24■□□□□ 0.99
ZNF558-204ENST00000596172 GNAQP50148 359 aa21.23■□□□□ 0.99
ZNF558-204ENST00000596172 MUM1L1Q5H9M0 696 aa21.23■□□□□ 0.99
ZNF558-204ENST00000596172 RGS22Q8NE09 1264 aa21.23■□□□□ 0.99
ZNF558-204ENST00000596172 NUP133Q8WUM0 1156 aa21.23■□□□□ 0.99
ZNF558-204ENST00000596172 CLEC4DQ8WXI8 215 aa21.23■□□□□ 0.99
ZNF558-204ENST00000596172 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.23■□□□□ 0.99
ZNF558-204ENST00000596172 VAT1LQ9HCJ6 419 aa21.23■□□□□ 0.99
ZNF558-204ENST00000596172 NRBP1Q9UHY1 535 aa21.23■□□□□ 0.99
ZNF558-204ENST00000596172 DHX16O60231 1041 aaKnown RBP21.22■□□□□ 0.99
ZNF558-204ENST00000596172 SGPL1O95470 568 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 RPS6KB1P23443 525 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 CYP2C19P33261 490 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms