RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 SMCHD1A6NHR9 2005 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 MYADML2A6NDP7 307 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 KDM4AO75164 1064 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 SNAI1O95863 264 aaPredicted RBP12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 ZNF865P0CJ78 1059 aaPredicted RBP12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 AAMPQ13685 434 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 TRIM60Q495X7 471 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 TTC22Q5TAA0 569 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 FAM160B2Q86V87 743 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 CHURC1Q8WUH1 139 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 GMCL1Q96IK5 515 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 FGD4Q96M96 766 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 UBA5Q9GZZ9 404 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 OSBPL3Q9H4L5 887 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 CCPG1Q9ULG6 757 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 CNPY2Q9Y2B0 182 aa12.15□□□□□ -0.46
SHKBP1-210ENST00000595874 POTEB2H3BUK9 544 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 DNM1LO00429 736 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 ADCY6O43306 1168 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 MSCO60682 206 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 IGHA2P01877 340 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 RARBP10826 455 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 COPB2P35606 906 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 MFAP1P55081 439 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 SYDE2Q5VT97 1194 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 SLC39A5Q6ZMH5 540 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 NOL8Q76FK4 1167 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 ARRDC4Q8NCT1 418 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 UBE2OQ9C0C9 1292 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 ACAD9Q9H845 621 aa12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 A1CFQ9NQ94 594 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.14□□□□□ -0.47
SHKBP1-210ENST00000595874 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 SOWAHBA6NEL2 793 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 BEX3Q00994 111 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 PTH1RQ03431 593 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 USH1GQ495M9 461 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 TMEM63BQ5T3F8 832 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 ARMCX2Q7L311 632 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 SH3RF1Q7Z6J0 888 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 CCDC144CPQ8IYA2 1237 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 VAT1LQ9HCJ6 419 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 LAMA4Q16363 1823 aa12.13□□□□□ -0.47
SHKBP1-210ENST00000595874 DNAJC25-GNG10A0A024R161 153 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 DHX16O60231 1041 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 FGRP09769 529 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 AKR1A1P14550 325 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 ACVR2BQ13705 512 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 SLC30A10Q6XR72 485 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 FBXO16Q8IX29 292 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 CHST13Q8NET6 341 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 ESR2Q92731 530 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 VTI1AQ96AJ9 217 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 PRO3102Q9H379 93 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 PDGFCQ9NRA1 345 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 FAM184BQ9ULE4 1060 aa12.12□□□□□ -0.47
SHKBP1-210ENST00000595874 ASTN1O14525 1302 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 SYNRGQ9UMZ2 1314 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 PTPDC1A2A3K4 754 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 HIP1O00291 1037 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 NFIBO00712 420 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 PQBP1O60828 265 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 C6orf222P0C671 652 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 PDHBP11177 359 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 CALML3P27482 149 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 BAATQ14032 418 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 IMMTQ16891 758 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 CCDC144BQ3MJ40 725 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 Q7L0L9 218 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 CHST3Q7LGC8 479 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 PPP1R13LQ8WUF5 828 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 GDF15Q99988 308 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 FBXO40Q9UH90 709 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 DIS3Q9Y2L1 958 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 TAF6LQ9Y6J9 622 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 LCTP09848 1927 aa12.11□□□□□ -0.47
SHKBP1-210ENST00000595874 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 RBAK-RBAKDNI3L0D1 243 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 ATP2A1O14983 1001 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 OAZ1P54368 228 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 KCNA10Q16322 511 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 CYB5R4Q7L1T6 521 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 RNF180Q86T96 592 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 LBHD1Q9BQE6 289 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 RANBP17Q9H2T7 1088 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 CYP39A1Q9NYL5 469 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 ZSWIM5Q9P217 1185 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 PRKAG2Q9UGJ0 569 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 SYNPO2Q9UMS6 1093 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 TNKSO95271 1327 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 ZMYM6O95789 1325 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 SYNGAP1Q96PV0 1343 aa12.1□□□□□ -0.47
SHKBP1-210ENST00000595874 LRRC37A2A6NM11 1700 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 TRIM43BA6NCK2 446 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms