RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 MAMDC4Q6UXC1 1216 aa18.85■□□□□ 0.61
IRF3-210ENST00000595240 FGD4Q96M96 766 aa18.85■□□□□ 0.61
IRF3-210ENST00000595240 ZKSCAN3Q9BRR0 538 aa18.85■□□□□ 0.61
IRF3-210ENST00000595240 RANBP17Q9H2T7 1088 aaKnown RBP18.85■□□□□ 0.61
IRF3-210ENST00000595240 ACAD9Q9H845 621 aa18.85■□□□□ 0.61
IRF3-210ENST00000595240 RNF146Q9NTX7 359 aa18.85■□□□□ 0.61
IRF3-210ENST00000595240 LAMA4Q16363 1823 aa18.85■□□□□ 0.61
IRF3-210ENST00000595240 FRMPD2Q68DX3 1309 aaPredicted RBP18.84■□□□□ 0.61
IRF3-210ENST00000595240 B4E1Z4 1266 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 ZNF865P0CJ78 1059 aaPredicted RBP18.84■□□□□ 0.61
IRF3-210ENST00000595240 SLC16A2P36021 539 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 CCDC178Q5BJE1 867 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 SYDE2Q5VT97 1194 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 ANO1Q5XXA6 986 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 CCDC174Q6PII3 467 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 IQCA1Q86XH1 822 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 C7orf61Q8IZ16 206 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 ARRDC4Q8NCT1 418 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 ANKS1AQ92625 1134 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 GPCPD1Q9NPB8 672 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 ZSWIM5Q9P217 1185 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 CNPY2Q9Y2B0 182 aa18.84■□□□□ 0.61
IRF3-210ENST00000595240 ZNFX1Q9P2E3 1918 aaKnown RBP18.84■□□□□ 0.61
IRF3-210ENST00000595240 SNAI1O95863 264 aaPredicted RBP18.83■□□□□ 0.6
IRF3-210ENST00000595240 ICAM1P05362 532 aa18.83■□□□□ 0.6
IRF3-210ENST00000595240 ZNF543Q08ER8 600 aa18.83■□□□□ 0.6
IRF3-210ENST00000595240 CHRDL2Q6WN34 429 aa18.83■□□□□ 0.6
IRF3-210ENST00000595240 TRERF1Q96PN7 1200 aa18.83■□□□□ 0.6
IRF3-210ENST00000595240 ZSCAN10Q96SZ4 725 aaPredicted RBP18.83■□□□□ 0.6
IRF3-210ENST00000595240 KRT23Q9C075 422 aa18.83■□□□□ 0.6
IRF3-210ENST00000595240 PRO3102Q9H379 93 aa18.83■□□□□ 0.6
IRF3-210ENST00000595240 CNNM2Q9H8M5 875 aa18.83■□□□□ 0.6
IRF3-210ENST00000595240 A1CFQ9NQ94 594 aaKnown RBP18.83■□□□□ 0.6
IRF3-210ENST00000595240 FRMPD3Q5JV73 1810 aa18.83■□□□□ 0.6
IRF3-210ENST00000595240 SGSM2O43147 1006 aa18.82■□□□□ 0.6
IRF3-210ENST00000595240 ALAS1P13196 640 aa18.82■□□□□ 0.6
IRF3-210ENST00000595240 PTH1RQ03431 593 aa18.82■□□□□ 0.6
IRF3-210ENST00000595240 LRRC26Q2I0M4 334 aa18.82■□□□□ 0.6
IRF3-210ENST00000595240 GJC2Q5T442 439 aaPredicted RBP18.82■□□□□ 0.6
IRF3-210ENST00000595240 ENAHQ8N8S7 591 aaPredicted RBP18.82■□□□□ 0.6
IRF3-210ENST00000595240 FAM133AQ8N9E0 248 aa18.82■□□□□ 0.6
IRF3-210ENST00000595240 SENP6Q9GZR1 1112 aaPredicted RBP18.82■□□□□ 0.6
IRF3-210ENST00000595240 CCPG1Q9ULG6 757 aa18.82■□□□□ 0.6
IRF3-210ENST00000595240 ALPK3Q96L96 1907 aa18.82■□□□□ 0.6
IRF3-210ENST00000595240 RANBP2P49792 3224 aaKnown RBP18.81■□□□□ 0.6
IRF3-210ENST00000595240 POTEB2H3BUK9 544 aa18.81■□□□□ 0.6
IRF3-210ENST00000595240 RARBP10826 455 aa18.81■□□□□ 0.6
IRF3-210ENST00000595240 AKR1A1P14550 325 aa18.81■□□□□ 0.6
IRF3-210ENST00000595240 CNTN2Q02246 1040 aa18.81■□□□□ 0.6
IRF3-210ENST00000595240 LRRC41Q15345 812 aa18.81■□□□□ 0.6
IRF3-210ENST00000595240 MUM1L1Q5H9M0 696 aa18.81■□□□□ 0.6
IRF3-210ENST00000595240 GPATCH4Q5T3I0 446 aaKnown RBP18.81■□□□□ 0.6
IRF3-210ENST00000595240 PNMA1Q8ND90 353 aa18.81■□□□□ 0.6
IRF3-210ENST00000595240 XPNPEP3Q9NQH7 507 aa18.81■□□□□ 0.6
IRF3-210ENST00000595240 TNKSO95271 1327 aa18.8■□□□□ 0.6
IRF3-210ENST00000595240 PLXNA1Q9UIW2 1896 aa18.8■□□□□ 0.6
IRF3-210ENST00000595240 KBTBD13C9JR72 458 aa18.8■□□□□ 0.6
IRF3-210ENST00000595240 CENPQQ7L2Z9 268 aaPredicted RBP18.8■□□□□ 0.6
IRF3-210ENST00000595240 KAT14Q9H8E8 782 aa18.8■□□□□ 0.6
IRF3-210ENST00000595240 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.8■□□□□ 0.6
IRF3-210ENST00000595240 CYP39A1Q9NYL5 469 aa18.8■□□□□ 0.6
IRF3-210ENST00000595240 RBM27Q9P2N5 1060 aaKnown RBP18.8■□□□□ 0.6
IRF3-210ENST00000595240 U3KPZ7 1027 aaPredicted RBP18.8■□□□□ 0.6
IRF3-210ENST00000595240 SOWAHBA6NEL2 793 aa18.79■□□□□ 0.6
IRF3-210ENST00000595240 CYP21A2P08686 494 aa18.79■□□□□ 0.6
IRF3-210ENST00000595240 ARMCX2Q7L311 632 aa18.79■□□□□ 0.6
IRF3-210ENST00000595240 UBAC1Q9BSL1 405 aa18.79■□□□□ 0.6
IRF3-210ENST00000595240 ZHX1Q9UKY1 873 aaPredicted RBP18.79■□□□□ 0.6
IRF3-210ENST00000595240 PNMA2Q9UL42 364 aa18.79■□□□□ 0.6
IRF3-210ENST00000595240 FAM184BQ9ULE4 1060 aa18.79■□□□□ 0.6
IRF3-210ENST00000595240 ZMYND8Q9ULU4 1186 aaPredicted RBP18.79■□□□□ 0.6
IRF3-210ENST00000595240 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
IRF3-210ENST00000595240 GOLGA8HP0CJ92 632 aa18.78■□□□□ 0.6
IRF3-210ENST00000595240 ACVR2BQ13705 512 aa18.78■□□□□ 0.6
IRF3-210ENST00000595240 CCDC144CPQ8IYA2 1237 aa18.78■□□□□ 0.6
IRF3-210ENST00000595240 LENG1Q96BZ8 264 aaPredicted RBP18.78■□□□□ 0.6
IRF3-210ENST00000595240 KATNBL1Q9H079 304 aa18.78■□□□□ 0.6
IRF3-210ENST00000595240 ABHD16BQ9H3Z7 469 aa18.78■□□□□ 0.6
IRF3-210ENST00000595240 ASTN1O14525 1302 aa18.77■□□□□ 0.6
IRF3-210ENST00000595240 WDR19Q8NEZ3 1342 aa18.77■□□□□ 0.6
IRF3-210ENST00000595240 TRIOBPQ9H2D6 2365 aa18.77■□□□□ 0.6
IRF3-210ENST00000595240 PGK1P00558 417 aa18.77■□□□□ 0.6
IRF3-210ENST00000595240 ATN1P54259 1190 aaPredicted RBP18.77■□□□□ 0.6
IRF3-210ENST00000595240 SEC23AQ15436 765 aa18.77■□□□□ 0.6
IRF3-210ENST00000595240 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.6
IRF3-210ENST00000595240 RNF180Q86T96 592 aa18.77■□□□□ 0.6
IRF3-210ENST00000595240 MAP4K1Q92918 833 aa18.77■□□□□ 0.6
IRF3-210ENST00000595240 PHF24Q9UPV7 400 aa18.77■□□□□ 0.6
IRF3-210ENST00000595240 TAF6LQ9Y6J9 622 aa18.77■□□□□ 0.6
IRF3-210ENST00000595240 NFIBO00712 420 aa18.76■□□□□ 0.59
IRF3-210ENST00000595240 ADAMTS4O75173 837 aa18.76■□□□□ 0.59
IRF3-210ENST00000595240 SYN1P17600 705 aa18.76■□□□□ 0.59
IRF3-210ENST00000595240 ADCYAP1R1P41586 468 aa18.76■□□□□ 0.59
IRF3-210ENST00000595240 FXR1P51114 621 aaKnown RBP eCLIP18.76■□□□□ 0.59
IRF3-210ENST00000595240 TRDNQ13061 729 aa18.76■□□□□ 0.59
IRF3-210ENST00000595240 SNX17Q15036 470 aa18.76■□□□□ 0.59
IRF3-210ENST00000595240 CCDC144BQ3MJ40 725 aa18.76■□□□□ 0.59
IRF3-210ENST00000595240 ASPRV1Q53RT3 343 aa18.76■□□□□ 0.59
IRF3-210ENST00000595240 NSMFQ6X4W1 530 aa18.76■□□□□ 0.59
IRF3-210ENST00000595240 CLEC4DQ8WXI8 215 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms