RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 MKI67P46013 3256 aaKnown RBP17.02■□□□□ 0.31
DDX39A-217ENST00000592391 SLC27A2O14975 620 aa17.01■□□□□ 0.31
DDX39A-217ENST00000592391 TFRCP02786 760 aaKnown RBP17.01■□□□□ 0.31
DDX39A-217ENST00000592391 CCND3P30281 292 aaPredicted RBP17.01■□□□□ 0.31
DDX39A-217ENST00000592391 CYP2C19P33261 490 aa17.01■□□□□ 0.31
DDX39A-217ENST00000592391 SNAP25P60880 206 aa17.01■□□□□ 0.31
DDX39A-217ENST00000592391 NECTIN1Q15223 517 aa17.01■□□□□ 0.31
DDX39A-217ENST00000592391 ZNF792Q3KQV3 632 aa17.01■□□□□ 0.31
DDX39A-217ENST00000592391 TKFCQ3LXA3 575 aa17.01■□□□□ 0.31
DDX39A-217ENST00000592391 CCDC174Q6PII3 467 aa17.01■□□□□ 0.31
DDX39A-217ENST00000592391 AGBL1Q96MI9 1066 aa17.01■□□□□ 0.31
DDX39A-217ENST00000592391 DIS3Q9Y2L1 958 aaKnown RBP17.01■□□□□ 0.31
DDX39A-217ENST00000592391 DNAJC25-GNG10A0A024R161 153 aa17■□□□□ 0.31
DDX39A-217ENST00000592391 IFIT3O14879 490 aaKnown RBP17■□□□□ 0.31
DDX39A-217ENST00000592391 ICAM1P05362 532 aa17■□□□□ 0.31
DDX39A-217ENST00000592391 CREB3L3Q68CJ9 461 aa17■□□□□ 0.31
DDX39A-217ENST00000592391 MB21D2Q8IYB1 491 aaPredicted RBP17■□□□□ 0.31
DDX39A-217ENST00000592391 DDX11Q96FC9 970 aa17■□□□□ 0.31
DDX39A-217ENST00000592391 ACAD9Q9H845 621 aa17■□□□□ 0.31
DDX39A-217ENST00000592391 HOMER2Q9NSB8 354 aa17■□□□□ 0.31
DDX39A-217ENST00000592391 RNF146Q9NTX7 359 aa17■□□□□ 0.31
DDX39A-217ENST00000592391 ERICH2A1L162 156 aa16.99■□□□□ 0.31
DDX39A-217ENST00000592391 GOLGA8HP0CJ92 632 aa16.99■□□□□ 0.31
DDX39A-217ENST00000592391 ALAS1P13196 640 aa16.99■□□□□ 0.31
DDX39A-217ENST00000592391 SART3Q15020 963 aaKnown RBP16.99■□□□□ 0.31
DDX39A-217ENST00000592391 ASPRV1Q53RT3 343 aa16.99■□□□□ 0.31
DDX39A-217ENST00000592391 UBE2Q1Q7Z7E8 422 aa16.99■□□□□ 0.31
DDX39A-217ENST00000592391 ANKRD35Q8N283 1001 aa16.99■□□□□ 0.31
DDX39A-217ENST00000592391 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
DDX39A-217ENST00000592391 CCPG1Q9ULG6 757 aa16.99■□□□□ 0.31
DDX39A-217ENST00000592391 TNRC18O15417 2968 aaPredicted RBP16.99■□□□□ 0.31
DDX39A-217ENST00000592391 PARP1P09874 1014 aaKnown RBP16.98■□□□□ 0.31
DDX39A-217ENST00000592391 CYBAP13498 195 aa16.98■□□□□ 0.31
DDX39A-217ENST00000592391 ANTXR2P58335 489 aa16.98■□□□□ 0.31
DDX39A-217ENST00000592391 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
DDX39A-217ENST00000592391 TRPV1Q8NER1 839 aa16.98■□□□□ 0.31
DDX39A-217ENST00000592391 OGDHLQ9ULD0 1010 aa16.98■□□□□ 0.31
DDX39A-217ENST00000592391 FARP2O94887 1054 aaPredicted RBP16.97■□□□□ 0.31
DDX39A-217ENST00000592391 WTAPQ15007 396 aa16.97■□□□□ 0.31
DDX39A-217ENST00000592391 TMEM67Q5HYA8 995 aa16.97■□□□□ 0.31
DDX39A-217ENST00000592391 RNF20Q5VTR2 975 aa16.97■□□□□ 0.31
DDX39A-217ENST00000592391 LHX8Q68G74 356 aa16.97■□□□□ 0.31
DDX39A-217ENST00000592391 MSL3Q8N5Y2 521 aaKnown RBP16.97■□□□□ 0.31
DDX39A-217ENST00000592391 ANKLE1Q8NAG6 615 aa16.97■□□□□ 0.31
DDX39A-217ENST00000592391 TINF2Q9BSI4 451 aa16.97■□□□□ 0.31
DDX39A-217ENST00000592391 MTA3Q9BTC8 594 aa16.97■□□□□ 0.31
DDX39A-217ENST00000592391 UBA5Q9GZZ9 404 aa16.97■□□□□ 0.31
DDX39A-217ENST00000592391 A1CFQ9NQ94 594 aaKnown RBP16.97■□□□□ 0.31
DDX39A-217ENST00000592391 PNMA2Q9UL42 364 aa16.97■□□□□ 0.31
DDX39A-217ENST00000592391 ZNFX1Q9P2E3 1918 aaKnown RBP16.97■□□□□ 0.31
DDX39A-217ENST00000592391 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.31
DDX39A-217ENST00000592391 MSCO60682 206 aa16.96■□□□□ 0.31
DDX39A-217ENST00000592391 CNGA1P29973 690 aa16.96■□□□□ 0.31
DDX39A-217ENST00000592391 MCM5P33992 734 aa16.96■□□□□ 0.31
DDX39A-217ENST00000592391 MUM1L1Q5H9M0 696 aa16.96■□□□□ 0.31
DDX39A-217ENST00000592391 ZNF467Q7Z7K2 595 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-217ENST00000592391 IGDCC4Q8TDY8 1250 aa16.96■□□□□ 0.31
DDX39A-217ENST00000592391 CPVLQ9H3G5 476 aa16.96■□□□□ 0.31
DDX39A-217ENST00000592391 SENP2Q9HC62 589 aa16.96■□□□□ 0.31
DDX39A-217ENST00000592391 DDX20Q9UHI6 824 aaKnown RBP16.96■□□□□ 0.31
DDX39A-217ENST00000592391 NRBP1Q9UHY1 535 aa16.96■□□□□ 0.31
DDX39A-217ENST00000592391 PFASO15067 1338 aa16.96■□□□□ 0.3
DDX39A-217ENST00000592391 POTEB2H3BUK9 544 aa16.95■□□□□ 0.3
DDX39A-217ENST00000592391 PRC1O43663 620 aa16.95■□□□□ 0.3
DDX39A-217ENST00000592391 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-217ENST00000592391 PRAMEF19Q5SWL8 479 aa16.95■□□□□ 0.3
DDX39A-217ENST00000592391 MAMDC4Q6UXC1 1216 aa16.95■□□□□ 0.3
DDX39A-217ENST00000592391 ADGRF4Q8IZF3 695 aa16.95■□□□□ 0.3
DDX39A-217ENST00000592391 STAG2Q8N3U4 1231 aa16.95■□□□□ 0.3
DDX39A-217ENST00000592391 SYNGAP1Q96PV0 1343 aa16.95■□□□□ 0.3
DDX39A-217ENST00000592391 PALM3A6NDB9 673 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-217ENST00000592391 SEPT4O43236 478 aa16.94■□□□□ 0.3
DDX39A-217ENST00000592391 TROAPQ12815 778 aa16.94■□□□□ 0.3
DDX39A-217ENST00000592391 CDC37Q16543 378 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-217ENST00000592391 TSGA10IPQ3SY00 556 aa16.94■□□□□ 0.3
DDX39A-217ENST00000592391 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
DDX39A-217ENST00000592391 TMEM87BQ96K49 555 aa16.94■□□□□ 0.3
DDX39A-217ENST00000592391 FGD4Q96M96 766 aa16.94■□□□□ 0.3
DDX39A-217ENST00000592391 LY9Q9HBG7 655 aa16.94■□□□□ 0.3
DDX39A-217ENST00000592391 CYP39A1Q9NYL5 469 aa16.94■□□□□ 0.3
DDX39A-217ENST00000592391 MAD2L2Q9UI95 211 aa16.94■□□□□ 0.3
DDX39A-217ENST00000592391 PLXNA1Q9UIW2 1896 aa16.94■□□□□ 0.3
DDX39A-217ENST00000592391 KLRF2D3W0D1 207 aa16.93■□□□□ 0.3
DDX39A-217ENST00000592391 MNX1P50219 401 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-217ENST00000592391 CNTN2Q02246 1040 aa16.93■□□□□ 0.3
DDX39A-217ENST00000592391 COL9A3Q14050 684 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-217ENST00000592391 GRM4Q14833 912 aa16.93■□□□□ 0.3
DDX39A-217ENST00000592391 NSMFQ6X4W1 530 aa16.93■□□□□ 0.3
DDX39A-217ENST00000592391 NECAB2Q7Z6G3 386 aa16.93■□□□□ 0.3
DDX39A-217ENST00000592391 CATIPQ7Z7H3 387 aa16.93■□□□□ 0.3
DDX39A-217ENST00000592391 CLEC4DQ8WXI8 215 aa16.93■□□□□ 0.3
DDX39A-217ENST00000592391 PAWRQ96IZ0 340 aaKnown RBP16.93■□□□□ 0.3
DDX39A-217ENST00000592391 JMJD4Q9H9V9 463 aa16.93■□□□□ 0.3
DDX39A-217ENST00000592391 CNPY2Q9Y2B0 182 aa16.93■□□□□ 0.3
DDX39A-217ENST00000592391 PDE4DIPQ5VU43 2346 aa16.93■□□□□ 0.3
DDX39A-217ENST00000592391 NFIBO00712 420 aa16.92■□□□□ 0.3
DDX39A-217ENST00000592391 SH2B2O14492 632 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-217ENST00000592391 DHX16O60231 1041 aaKnown RBP16.92■□□□□ 0.3
DDX39A-217ENST00000592391 REC8O95072 547 aa16.92■□□□□ 0.3
DDX39A-217ENST00000592391 RASEFQ8IZ41 740 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms