RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 PARP1P09874 1014 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 SNHG28P0DPA3 235 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 CCND3P30281 292 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 ANTXR2P58335 489 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 NECTIN1Q15223 517 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 SEC23AQ15436 765 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 MB21D2Q8IYB1 491 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 ANKS1AQ92625 1134 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 SENP2Q9HC62 589 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 RNF146Q9NTX7 359 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 RLFQ13129 1914 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 ZNF536O15090 1300 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 PRC1O43663 620 aa16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 GJA8P48165 433 aa16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 ASPRV1Q53RT3 343 aa16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 BTNL9Q6UXG8 535 aa16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 CHST13Q8NET6 341 aa16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 SHISA4Q96DD7 197 aa16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 MAML3Q96JK9 1138 aa16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 TRERF1Q96PN7 1200 aa16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 RANBP17Q9H2T7 1088 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 ACAD9Q9H845 621 aa16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 PAK6Q9NQU5 681 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 FBXO40Q9UH90 709 aa16.41■□□□□ 0.22
SCAMP4-212ENST00000590266 SGPL1O95470 568 aa16.4■□□□□ 0.22
SCAMP4-212ENST00000590266 ICAM1P05362 532 aa16.4■□□□□ 0.22
SCAMP4-212ENST00000590266 MCM5P33992 734 aa16.4■□□□□ 0.22
SCAMP4-212ENST00000590266 COL9A3Q14050 684 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-212ENST00000590266 MUM1L1Q5H9M0 696 aa16.4■□□□□ 0.22
SCAMP4-212ENST00000590266 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
SCAMP4-212ENST00000590266 NFXL1Q6ZNB6 911 aa16.4■□□□□ 0.22
SCAMP4-212ENST00000590266 LRRC2Q9BYS8 371 aa16.4■□□□□ 0.22
SCAMP4-212ENST00000590266 VAT1LQ9HCJ6 419 aa16.4■□□□□ 0.22
SCAMP4-212ENST00000590266 GPHNQ9NQX3 736 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-212ENST00000590266 ZNF792Q3KQV3 632 aa16.39■□□□□ 0.21
SCAMP4-212ENST00000590266 USH1GQ495M9 461 aa16.39■□□□□ 0.21
SCAMP4-212ENST00000590266 PRAMEF19Q5SWL8 479 aa16.39■□□□□ 0.21
SCAMP4-212ENST00000590266 OLFML2BQ68BL8 750 aa16.39■□□□□ 0.21
SCAMP4-212ENST00000590266 NSMFQ6X4W1 530 aa16.39■□□□□ 0.21
SCAMP4-212ENST00000590266 CATIPQ7Z7H3 387 aa16.39■□□□□ 0.21
SCAMP4-212ENST00000590266 ADGRF4Q8IZF3 695 aa16.39■□□□□ 0.21
SCAMP4-212ENST00000590266 STAG2Q8N3U4 1231 aa16.39■□□□□ 0.21
SCAMP4-212ENST00000590266 NUP133Q8WUM0 1156 aa16.39■□□□□ 0.21
SCAMP4-212ENST00000590266 PLXNB2O15031 1838 aa16.39■□□□□ 0.21
SCAMP4-212ENST00000590266 CDC37Q16543 378 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-212ENST00000590266 TKFCQ3LXA3 575 aa16.38■□□□□ 0.21
SCAMP4-212ENST00000590266 RASEFQ8IZ41 740 aa16.38■□□□□ 0.21
SCAMP4-212ENST00000590266 IGDCC4Q8TDY8 1250 aa16.38■□□□□ 0.21
SCAMP4-212ENST00000590266 MYL10Q9BUA6 226 aa16.38■□□□□ 0.21
SCAMP4-212ENST00000590266 A1CFQ9NQ94 594 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-212ENST00000590266 CCDC69A6NI79 296 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 KLRF2D3W0D1 207 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 POTEB2H3BUK9 544 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 FARP2O94887 1054 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 REC8O95072 547 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 CYBAP13498 195 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 CNTN2Q02246 1040 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 ANO1Q5XXA6 986 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 RAB11FIP4Q86YS3 637 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 TRPV1Q8NER1 839 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 TCEANC2Q96MN5 208 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 NEK1Q96PY6 1258 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 LY9Q9HBG7 655 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 MAD2L2Q9UI95 211 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 PARP14Q460N5 1801 aa16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 KIAA0100Q14667 2235 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-212ENST00000590266 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 NFIBO00712 420 aa16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 SH2B2O14492 632 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 ADCK5Q3MIX3 580 aa16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 HOMER1Q86YM7 354 aa16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 ZNF654Q8IZM8 581 aa16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 PIBF1Q8WXW3 757 aa16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 DPF3Q92784 378 aa16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 TMEM87BQ96K49 555 aa16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 TINF2Q9BSI4 451 aa16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 DIS3Q9Y2L1 958 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-212ENST00000590266 COL11A1P12107 1806 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 DNAJC25-GNG10A0A024R161 153 aa16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 RXRAP19793 462 aa16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 KRT32Q14532 448 aa16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 GRM4Q14833 912 aa16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 QRICH1Q2TAL8 776 aa16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 CCDC144CPQ8IYA2 1237 aa16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 JMJD4Q9H9V9 463 aa16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 DDX20Q9UHI6 824 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 CNPY2Q9Y2B0 182 aa16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 PFASO15067 1338 aa16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 ZNF236Q9UL36 1845 aa16.35■□□□□ 0.21
SCAMP4-212ENST00000590266 BRCA2P51587 3418 aa16.34■□□□□ 0.21
SCAMP4-212ENST00000590266 CPA1P15085 419 aa16.34■□□□□ 0.21
SCAMP4-212ENST00000590266 CALML3P27482 149 aa16.34■□□□□ 0.21
SCAMP4-212ENST00000590266 FGD1P98174 961 aa16.34■□□□□ 0.21
SCAMP4-212ENST00000590266 TROAPQ12815 778 aa16.34■□□□□ 0.21
SCAMP4-212ENST00000590266 BAATQ14032 418 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-212ENST00000590266 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCAMP4-212ENST00000590266 CTCFLQ8NI51 663 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-212ENST00000590266 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms