RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 ZSCAN10Q96SZ4 725 aaPredicted RBP18.17■□□□□ 0.5
GCDH-208ENST00000588905 HTATIP2Q9BUP3 242 aa18.17■□□□□ 0.5
GCDH-208ENST00000588905 FBXO40Q9UH90 709 aa18.17■□□□□ 0.5
GCDH-208ENST00000588905 DIS3Q9Y2L1 958 aaKnown RBP18.17■□□□□ 0.5
GCDH-208ENST00000588905 E7EWF7 191 aa18.16■□□□□ 0.5
GCDH-208ENST00000588905 LHX8Q68G74 356 aa18.16■□□□□ 0.5
GCDH-208ENST00000588905 BTNL9Q6UXG8 535 aa18.16■□□□□ 0.5
GCDH-208ENST00000588905 STOX1Q6ZVD7 989 aa18.16■□□□□ 0.5
GCDH-208ENST00000588905 CYB5R4Q7L1T6 521 aa18.16■□□□□ 0.5
GCDH-208ENST00000588905 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.16■□□□□ 0.5
GCDH-208ENST00000588905 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
GCDH-208ENST00000588905 ANO2Q9NQ90 1003 aa18.16■□□□□ 0.5
GCDH-208ENST00000588905 PRR12Q9ULL5 1215 aa18.16■□□□□ 0.5
GCDH-208ENST00000588905 ZNFX1Q9P2E3 1918 aaKnown RBP18.15■□□□□ 0.5
GCDH-208ENST00000588905 PDHBP11177 359 aa18.15■□□□□ 0.5
GCDH-208ENST00000588905 CNGA1P29973 690 aa18.15■□□□□ 0.5
GCDH-208ENST00000588905 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
GCDH-208ENST00000588905 TTBK2Q6IQ55 1244 aa18.15■□□□□ 0.5
GCDH-208ENST00000588905 CASC1Q6TDU7 716 aa18.15■□□□□ 0.5
GCDH-208ENST00000588905 ENAHQ8N8S7 591 aaPredicted RBP18.15■□□□□ 0.5
GCDH-208ENST00000588905 TRPV1Q8NER1 839 aa18.15■□□□□ 0.5
GCDH-208ENST00000588905 SLC27A2O14975 620 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 MSCO60682 206 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 CYBAP13498 195 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 TRDNQ13061 729 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 TKFCQ3LXA3 575 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 SYDE2Q5VT97 1194 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 NECAB2Q7Z6G3 386 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 AGBL1Q96MI9 1066 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 KAT14Q9H8E8 782 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 GPCPD1Q9NPB8 672 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 DDX20Q9UHI6 824 aaKnown RBP18.14■□□□□ 0.49
GCDH-208ENST00000588905 ZNF536O15090 1300 aa18.14■□□□□ 0.49
GCDH-208ENST00000588905 FRMPD2Q68DX3 1309 aaPredicted RBP18.14■□□□□ 0.49
GCDH-208ENST00000588905 DNAJC25-GNG10A0A024R161 153 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 SLC16A2P36021 539 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 SNAP25P60880 206 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 ZNF543Q08ER8 600 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 SEC23AQ15436 765 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 CREB3L3Q68CJ9 461 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 CCDC174Q6PII3 467 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 ANKRD35Q8N283 1001 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 PNMA1Q8ND90 353 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 TINF2Q9BSI4 451 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 UBAC1Q9BSL1 405 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 ACAD9Q9H845 621 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 NRBP1Q9UHY1 535 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 TNKSO95271 1327 aa18.13■□□□□ 0.49
GCDH-208ENST00000588905 DNAH12Q6ZR08 3092 aa18.12■□□□□ 0.49
GCDH-208ENST00000588905 PRAMEF19Q5SWL8 479 aa18.12■□□□□ 0.49
GCDH-208ENST00000588905 GPATCH4Q5T3I0 446 aaKnown RBP18.12■□□□□ 0.49
GCDH-208ENST00000588905 MSL3Q8N5Y2 521 aaKnown RBP18.12■□□□□ 0.49
GCDH-208ENST00000588905 NCOA7Q8NI08 942 aa18.12■□□□□ 0.49
GCDH-208ENST00000588905 TRERF1Q96PN7 1200 aa18.12■□□□□ 0.49
GCDH-208ENST00000588905 RANBP17Q9H2T7 1088 aaKnown RBP18.12■□□□□ 0.49
GCDH-208ENST00000588905 HOMER2Q9NSB8 354 aa18.12■□□□□ 0.49
GCDH-208ENST00000588905 RNF146Q9NTX7 359 aa18.12■□□□□ 0.49
GCDH-208ENST00000588905 PFASO15067 1338 aa18.12■□□□□ 0.49
GCDH-208ENST00000588905 SEPT4O43236 478 aa18.11■□□□□ 0.49
GCDH-208ENST00000588905 ICAM1P05362 532 aa18.11■□□□□ 0.49
GCDH-208ENST00000588905 ALAS1P13196 640 aa18.11■□□□□ 0.49
GCDH-208ENST00000588905 CHST3Q7LGC8 479 aa18.11■□□□□ 0.49
GCDH-208ENST00000588905 RALYLQ86SE5 291 aaKnown RBP18.11■□□□□ 0.49
GCDH-208ENST00000588905 CCPG1Q9ULG6 757 aa18.11■□□□□ 0.49
GCDH-208ENST00000588905 LAMA4Q16363 1823 aa18.11■□□□□ 0.49
GCDH-208ENST00000588905 PLXNA1Q9UIW2 1896 aa18.11■□□□□ 0.49
GCDH-208ENST00000588905 LTBP2Q14767 1821 aa18.1■□□□□ 0.49
GCDH-208ENST00000588905 SOX1O00570 391 aaPredicted RBP18.1■□□□□ 0.49
GCDH-208ENST00000588905 EVI5O60447 810 aa18.1■□□□□ 0.49
GCDH-208ENST00000588905 ANTXR2P58335 489 aa18.1■□□□□ 0.49
GCDH-208ENST00000588905 COL9A3Q14050 684 aaPredicted RBP18.1■□□□□ 0.49
GCDH-208ENST00000588905 IFIT1BQ5T764 474 aaKnown RBP18.1■□□□□ 0.49
GCDH-208ENST00000588905 ZNF467Q7Z7K2 595 aaPredicted RBP18.1■□□□□ 0.49
GCDH-208ENST00000588905 MB21D2Q8IYB1 491 aaPredicted RBP18.1■□□□□ 0.49
GCDH-208ENST00000588905 C11orf49Q9H6J7 331 aa18.1■□□□□ 0.49
GCDH-208ENST00000588905 NR2E3Q9Y5X4 410 aa18.1■□□□□ 0.49
GCDH-208ENST00000588905 SYNGAP1Q96PV0 1343 aa18.09■□□□□ 0.49
GCDH-208ENST00000588905 POTEB2H3BUK9 544 aa18.09■□□□□ 0.49
GCDH-208ENST00000588905 IFIT3O14879 490 aaKnown RBP18.09■□□□□ 0.49
GCDH-208ENST00000588905 GOLGA8HP0CJ92 632 aa18.09■□□□□ 0.49
GCDH-208ENST00000588905 MAMDC4Q6UXC1 1216 aa18.09■□□□□ 0.49
GCDH-208ENST00000588905 IGDCC4Q8TDY8 1250 aa18.09■□□□□ 0.49
GCDH-208ENST00000588905 SENP2Q9HC62 589 aa18.09■□□□□ 0.49
GCDH-208ENST00000588905 A1CFQ9NQ94 594 aaKnown RBP18.09■□□□□ 0.49
GCDH-208ENST00000588905 PNMA2Q9UL42 364 aa18.09■□□□□ 0.49
GCDH-208ENST00000588905 CNPY2Q9Y2B0 182 aa18.09■□□□□ 0.49
GCDH-208ENST00000588905 COL6A1P12109 1028 aa18.08■□□□□ 0.48
GCDH-208ENST00000588905 ASPRV1Q53RT3 343 aa18.08■□□□□ 0.48
GCDH-208ENST00000588905 RASEFQ8IZ41 740 aa18.08■□□□□ 0.48
GCDH-208ENST00000588905 UBA5Q9GZZ9 404 aa18.08■□□□□ 0.48
GCDH-208ENST00000588905 SMCHD1A6NHR9 2005 aa18.07■□□□□ 0.48
GCDH-208ENST00000588905 SNAI1O95863 264 aaPredicted RBP18.07■□□□□ 0.48
GCDH-208ENST00000588905 PARP1P09874 1014 aaKnown RBP18.07■□□□□ 0.48
GCDH-208ENST00000588905 ZNF865P0CJ78 1059 aaPredicted RBP18.07■□□□□ 0.48
GCDH-208ENST00000588905 TAL1P17542 331 aaPredicted RBP18.07■□□□□ 0.48
GCDH-208ENST00000588905 CNTN2Q02246 1040 aa18.07■□□□□ 0.48
GCDH-208ENST00000588905 TSGA10IPQ3SY00 556 aa18.07■□□□□ 0.48
GCDH-208ENST00000588905 MUM1L1Q5H9M0 696 aa18.07■□□□□ 0.48
GCDH-208ENST00000588905 ANO1Q5XXA6 986 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms