RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 GPCPD1Q9NPB8 672 aa20.81■□□□□ 0.92
TPM4-206ENST00000587201 RNF146Q9NTX7 359 aa20.81■□□□□ 0.92
TPM4-206ENST00000587201 CNPY2Q9Y2B0 182 aa20.81■□□□□ 0.92
TPM4-206ENST00000587201 LAMA4Q16363 1823 aa20.81■□□□□ 0.92
TPM4-206ENST00000587201 PLXNA1Q9UIW2 1896 aa20.8■□□□□ 0.92
TPM4-206ENST00000587201 B4E1Z4 1266 aa20.8■□□□□ 0.92
TPM4-206ENST00000587201 DNM1LO00429 736 aa20.8■□□□□ 0.92
TPM4-206ENST00000587201 MYCNP04198 464 aaPredicted RBP20.8■□□□□ 0.92
TPM4-206ENST00000587201 PDHBP11177 359 aa20.8■□□□□ 0.92
TPM4-206ENST00000587201 ALAS1P13196 640 aa20.8■□□□□ 0.92
TPM4-206ENST00000587201 TKFCQ3LXA3 575 aa20.8■□□□□ 0.92
TPM4-206ENST00000587201 GJC2Q5T442 439 aaPredicted RBP20.8■□□□□ 0.92
TPM4-206ENST00000587201 DGKHQ86XP1 1220 aa20.8■□□□□ 0.92
TPM4-206ENST00000587201 MSL3Q8N5Y2 521 aaKnown RBP20.8■□□□□ 0.92
TPM4-206ENST00000587201 ARRDC4Q8NCT1 418 aa20.8■□□□□ 0.92
TPM4-206ENST00000587201 TRERF1Q96PN7 1200 aa20.8■□□□□ 0.92
TPM4-206ENST00000587201 SENP6Q9GZR1 1112 aaPredicted RBP20.8■□□□□ 0.92
TPM4-206ENST00000587201 CEP290O15078 2479 aa20.79■□□□□ 0.92
TPM4-206ENST00000587201 ALPK3Q96L96 1907 aa20.79■□□□□ 0.92
TPM4-206ENST00000587201 TAL1P17542 331 aaPredicted RBP20.79■□□□□ 0.92
TPM4-206ENST00000587201 SYDE2Q5VT97 1194 aa20.79■□□□□ 0.92
TPM4-206ENST00000587201 BTNL9Q6UXG8 535 aa20.79■□□□□ 0.92
TPM4-206ENST00000587201 KRT23Q9C075 422 aa20.79■□□□□ 0.92
TPM4-206ENST00000587201 CCPG1Q9ULG6 757 aa20.79■□□□□ 0.92
TPM4-206ENST00000587201 SYNGAP1Q96PV0 1343 aa20.78■□□□□ 0.92
TPM4-206ENST00000587201 MAMDC4Q6UXC1 1216 aa20.78■□□□□ 0.92
TPM4-206ENST00000587201 ZNF467Q7Z7K2 595 aaPredicted RBP20.78■□□□□ 0.92
TPM4-206ENST00000587201 RANBP17Q9H2T7 1088 aaKnown RBP20.78■□□□□ 0.92
TPM4-206ENST00000587201 KAT14Q9H8E8 782 aa20.78■□□□□ 0.92
TPM4-206ENST00000587201 CNNM2Q9H8M5 875 aa20.78■□□□□ 0.92
TPM4-206ENST00000587201 ZSWIM5Q9P217 1185 aa20.78■□□□□ 0.92
TPM4-206ENST00000587201 KBTBD13C9JR72 458 aa20.77■□□□□ 0.92
TPM4-206ENST00000587201 POTEB2H3BUK9 544 aa20.77■□□□□ 0.92
TPM4-206ENST00000587201 ICAM1P05362 532 aa20.77■□□□□ 0.92
TPM4-206ENST00000587201 ZNF865P0CJ78 1059 aaPredicted RBP20.77■□□□□ 0.92
TPM4-206ENST00000587201 RARBP10826 455 aa20.77■□□□□ 0.92
TPM4-206ENST00000587201 AKR1A1P14550 325 aa20.77■□□□□ 0.92
TPM4-206ENST00000587201 ZNF543Q08ER8 600 aa20.77■□□□□ 0.92
TPM4-206ENST00000587201 LRRC26Q2I0M4 334 aa20.77■□□□□ 0.92
TPM4-206ENST00000587201 ZSCAN10Q96SZ4 725 aaPredicted RBP20.77■□□□□ 0.92
TPM4-206ENST00000587201 A1CFQ9NQ94 594 aaKnown RBP20.77■□□□□ 0.92
TPM4-206ENST00000587201 ZHX1Q9UKY1 873 aaPredicted RBP20.77■□□□□ 0.92
TPM4-206ENST00000587201 ZMYND8Q9ULU4 1186 aaPredicted RBP20.77■□□□□ 0.92
TPM4-206ENST00000587201 SNAI1O95863 264 aaPredicted RBP20.76■□□□□ 0.91
TPM4-206ENST00000587201 SNHG28P0DPA3 235 aa20.76■□□□□ 0.91
TPM4-206ENST00000587201 CNTN2Q02246 1040 aa20.76■□□□□ 0.91
TPM4-206ENST00000587201 PTH1RQ03431 593 aa20.76■□□□□ 0.91
TPM4-206ENST00000587201 MUM1L1Q5H9M0 696 aa20.76■□□□□ 0.91
TPM4-206ENST00000587201 PNMA1Q8ND90 353 aa20.76■□□□□ 0.91
TPM4-206ENST00000587201 XPNPEP3Q9NQH7 507 aa20.76■□□□□ 0.91
TPM4-206ENST00000587201 TNKSO95271 1327 aa20.76■□□□□ 0.91
TPM4-206ENST00000587201 SGSM2O43147 1006 aa20.75■□□□□ 0.91
TPM4-206ENST00000587201 SLC34A2O95436 690 aa20.75■□□□□ 0.91
TPM4-206ENST00000587201 SYN1P17600 705 aa20.75■□□□□ 0.91
TPM4-206ENST00000587201 ATN1P54259 1190 aaPredicted RBP20.75■□□□□ 0.91
TPM4-206ENST00000587201 LRRC41Q15345 812 aa20.75■□□□□ 0.91
TPM4-206ENST00000587201 GPATCH4Q5T3I0 446 aaKnown RBP20.75■□□□□ 0.91
TPM4-206ENST00000587201 ENAHQ8N8S7 591 aaPredicted RBP20.75■□□□□ 0.91
TPM4-206ENST00000587201 ANKS1AQ92625 1134 aa20.75■□□□□ 0.91
TPM4-206ENST00000587201 FGD4Q96M96 766 aa20.75■□□□□ 0.91
TPM4-206ENST00000587201 UBAC1Q9BSL1 405 aa20.75■□□□□ 0.91
TPM4-206ENST00000587201 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.75■□□□□ 0.91
TPM4-206ENST00000587201 RBM27Q9P2N5 1060 aaKnown RBP20.75■□□□□ 0.91
TPM4-206ENST00000587201 FAM184BQ9ULE4 1060 aa20.75■□□□□ 0.91
TPM4-206ENST00000587201 GOLGA8HP0CJ92 632 aa20.74■□□□□ 0.91
TPM4-206ENST00000587201 TRDNQ13061 729 aa20.74■□□□□ 0.91
TPM4-206ENST00000587201 ACVR2BQ13705 512 aa20.74■□□□□ 0.91
TPM4-206ENST00000587201 NSMFQ6X4W1 530 aa20.74■□□□□ 0.91
TPM4-206ENST00000587201 CENPQQ7L2Z9 268 aaPredicted RBP20.74■□□□□ 0.91
TPM4-206ENST00000587201 ARMCX2Q7L311 632 aa20.74■□□□□ 0.91
TPM4-206ENST00000587201 FAM133AQ8N9E0 248 aa20.74■□□□□ 0.91
TPM4-206ENST00000587201 U3KPZ7 1027 aaPredicted RBP20.74■□□□□ 0.91
TPM4-206ENST00000587201 PGK1P00558 417 aa20.73■□□□□ 0.91
TPM4-206ENST00000587201 CYP21A2P08686 494 aa20.73■□□□□ 0.91
TPM4-206ENST00000587201 RNF180Q86T96 592 aa20.73■□□□□ 0.91
TPM4-206ENST00000587201 CCDC144CPQ8IYA2 1237 aa20.73■□□□□ 0.91
TPM4-206ENST00000587201 LENG1Q96BZ8 264 aaPredicted RBP20.73■□□□□ 0.91
TPM4-206ENST00000587201 ABHD16BQ9H3Z7 469 aa20.73■□□□□ 0.91
TPM4-206ENST00000587201 CYP39A1Q9NYL5 469 aa20.73■□□□□ 0.91
TPM4-206ENST00000587201 SOWAHBA6NEL2 793 aa20.72■□□□□ 0.91
TPM4-206ENST00000587201 ADCYAP1R1P41586 468 aa20.72■□□□□ 0.91
TPM4-206ENST00000587201 IFIT1BQ5T764 474 aaKnown RBP20.72■□□□□ 0.91
TPM4-206ENST00000587201 UBA5Q9GZZ9 404 aa20.72■□□□□ 0.91
TPM4-206ENST00000587201 PNMA2Q9UL42 364 aa20.72■□□□□ 0.91
TPM4-206ENST00000587201 SMCHD1A6NHR9 2005 aa20.71■□□□□ 0.91
TPM4-206ENST00000587201 ASB14A6NK59 587 aa20.71■□□□□ 0.91
TPM4-206ENST00000587201 CYB5R4Q7L1T6 521 aa20.71■□□□□ 0.91
TPM4-206ENST00000587201 FERMT2Q96AC1 680 aa20.71■□□□□ 0.91
TPM4-206ENST00000587201 PRO3102Q9H379 93 aa20.71■□□□□ 0.91
TPM4-206ENST00000587201 CPVLQ9H3G5 476 aa20.71■□□□□ 0.91
TPM4-206ENST00000587201 RTP1P59025 263 aa20.7■□□□□ 0.9
TPM4-206ENST00000587201 CCDC144BQ3MJ40 725 aa20.7■□□□□ 0.9
TPM4-206ENST00000587201 ASPRV1Q53RT3 343 aa20.7■□□□□ 0.9
TPM4-206ENST00000587201 SLC39A5Q6ZMH5 540 aa20.7■□□□□ 0.9
TPM4-206ENST00000587201 KIAA1211Q6ZU35 1233 aa20.7■□□□□ 0.9
TPM4-206ENST00000587201 RALYLQ86SE5 291 aaKnown RBP20.7■□□□□ 0.9
TPM4-206ENST00000587201 PTPDC1A2A3K4 754 aa20.69■□□□□ 0.9
TPM4-206ENST00000587201 NFIBO00712 420 aa20.69■□□□□ 0.9
TPM4-206ENST00000587201 DUSP11O75319 330 aaKnown RBP20.69■□□□□ 0.9
TPM4-206ENST00000587201 PARP1P09874 1014 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms