RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 CHST13Q8NET6 341 aa28.2■■■□□ 2.1
ERCC2-209ENST00000586856 MAML3Q96JK9 1138 aa28.2■■■□□ 2.1
ERCC2-209ENST00000586856 AGBL1Q96MI9 1066 aa28.2■■■□□ 2.1
ERCC2-209ENST00000586856 CRISPLD2Q9H0B8 497 aa28.2■■■□□ 2.1
ERCC2-209ENST00000586856 RANBP17Q9H2T7 1088 aaKnown RBP28.2■■■□□ 2.1
ERCC2-209ENST00000586856 HOMER2Q9NSB8 354 aa28.2■■■□□ 2.1
ERCC2-209ENST00000586856 FBXO40Q9UH90 709 aa28.2■■■□□ 2.1
ERCC2-209ENST00000586856 GOLGA8HP0CJ92 632 aa28.19■■■□□ 2.1
ERCC2-209ENST00000586856 GPATCH4Q5T3I0 446 aaKnown RBP28.19■■■□□ 2.1
ERCC2-209ENST00000586856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.19■■■□□ 2.1
ERCC2-209ENST00000586856 SLC27A2O14975 620 aa28.18■■■□□ 2.1
ERCC2-209ENST00000586856 ZNF792Q3KQV3 632 aa28.18■■■□□ 2.1
ERCC2-209ENST00000586856 MB21D2Q8IYB1 491 aaPredicted RBP28.18■■■□□ 2.1
ERCC2-209ENST00000586856 ACAD9Q9H845 621 aa28.18■■■□□ 2.1
ERCC2-209ENST00000586856 RNF146Q9NTX7 359 aa28.18■■■□□ 2.1
ERCC2-209ENST00000586856 TFRCP02786 760 aaKnown RBP28.17■■■□□ 2.1
ERCC2-209ENST00000586856 TKFCQ3LXA3 575 aa28.17■■■□□ 2.1
ERCC2-209ENST00000586856 CREB3L3Q68CJ9 461 aa28.17■■■□□ 2.1
ERCC2-209ENST00000586856 DDX11Q96FC9 970 aa28.17■■■□□ 2.1
ERCC2-209ENST00000586856 CCPG1Q9ULG6 757 aa28.17■■■□□ 2.1
ERCC2-209ENST00000586856 SMCHD1A6NHR9 2005 aa28.17■■■□□ 2.1
ERCC2-209ENST00000586856 TNRC18O15417 2968 aaPredicted RBP28.16■■■□□ 2.1
ERCC2-209ENST00000586856 IFIT3O14879 490 aaKnown RBP28.16■■■□□ 2.1
ERCC2-209ENST00000586856 FARP2O94887 1054 aaPredicted RBP28.16■■■□□ 2.1
ERCC2-209ENST00000586856 ICAM1P05362 532 aa28.16■■■□□ 2.1
ERCC2-209ENST00000586856 ALAS1P13196 640 aa28.16■■■□□ 2.1
ERCC2-209ENST00000586856 CYBAP13498 195 aa28.16■■■□□ 2.1
ERCC2-209ENST00000586856 TAL1P17542 331 aaPredicted RBP28.16■■■□□ 2.1
ERCC2-209ENST00000586856 ANTXR2P58335 489 aa28.16■■■□□ 2.1
ERCC2-209ENST00000586856 NECTIN1Q15223 517 aa28.16■■■□□ 2.1
ERCC2-209ENST00000586856 CHST3Q7LGC8 479 aa28.16■■■□□ 2.1
ERCC2-209ENST00000586856 ANKRD35Q8N283 1001 aa28.16■■■□□ 2.1
ERCC2-209ENST00000586856 DIS3Q9Y2L1 958 aaKnown RBP28.16■■■□□ 2.1
ERCC2-209ENST00000586856 DNAJC25-GNG10A0A024R161 153 aa28.15■■■□□ 2.1
ERCC2-209ENST00000586856 CAPN2P17655 700 aa28.15■■■□□ 2.1
ERCC2-209ENST00000586856 ASPRV1Q53RT3 343 aa28.15■■■□□ 2.1
ERCC2-209ENST00000586856 TRPV1Q8NER1 839 aa28.15■■■□□ 2.1
ERCC2-209ENST00000586856 CPVLQ9H3G5 476 aa28.15■■■□□ 2.1
ERCC2-209ENST00000586856 ERICH2A1L162 156 aa28.14■■■□□ 2.1
ERCC2-209ENST00000586856 SART3Q15020 963 aaKnown RBP28.14■■■□□ 2.1
ERCC2-209ENST00000586856 UBE2Q1Q7Z7E8 422 aa28.14■■■□□ 2.1
ERCC2-209ENST00000586856 TRERF1Q96PN7 1200 aa28.14■■■□□ 2.1
ERCC2-209ENST00000586856 PARP1P09874 1014 aaKnown RBP28.13■■■□□ 2.09
ERCC2-209ENST00000586856 WTAPQ15007 396 aa28.13■■■□□ 2.09
ERCC2-209ENST00000586856 UBA5Q9GZZ9 404 aa28.13■■■□□ 2.09
ERCC2-209ENST00000586856 SENP2Q9HC62 589 aa28.13■■■□□ 2.09
ERCC2-209ENST00000586856 A1CFQ9NQ94 594 aaKnown RBP28.13■■■□□ 2.09
ERCC2-209ENST00000586856 TMEM67Q5HYA8 995 aa28.12■■■□□ 2.09
ERCC2-209ENST00000586856 TINF2Q9BSI4 451 aa28.12■■■□□ 2.09
ERCC2-209ENST00000586856 OGDHLQ9ULD0 1010 aa28.12■■■□□ 2.09
ERCC2-209ENST00000586856 LCTP09848 1927 aa28.12■■■□□ 2.09
ERCC2-209ENST00000586856 MYH6P13533 1939 aa28.12■■■□□ 2.09
ERCC2-209ENST00000586856 MCM3APO60318 1980 aa28.11■■■□□ 2.09
ERCC2-209ENST00000586856 CNGA1P29973 690 aa28.11■■■□□ 2.09
ERCC2-209ENST00000586856 MUM1L1Q5H9M0 696 aa28.11■■■□□ 2.09
ERCC2-209ENST00000586856 RNF20Q5VTR2 975 aa28.11■■■□□ 2.09
ERCC2-209ENST00000586856 LHX8Q68G74 356 aa28.11■■■□□ 2.09
ERCC2-209ENST00000586856 DDX20Q9UHI6 824 aaKnown RBP28.11■■■□□ 2.09
ERCC2-209ENST00000586856 WDR19Q8NEZ3 1342 aa28.11■■■□□ 2.09
ERCC2-209ENST00000586856 ANKLE1Q8NAG6 615 aa28.1■■■□□ 2.09
ERCC2-209ENST00000586856 FGD4Q96M96 766 aa28.1■■■□□ 2.09
ERCC2-209ENST00000586856 PNMA2Q9UL42 364 aa28.1■■■□□ 2.09
ERCC2-209ENST00000586856 PFASO15067 1338 aa28.1■■■□□ 2.09
ERCC2-209ENST00000586856 PRC1O43663 620 aa28.09■■■□□ 2.09
ERCC2-209ENST00000586856 COL9A3Q14050 684 aaPredicted RBP28.09■■■□□ 2.09
ERCC2-209ENST00000586856 CDC37Q16543 378 aaPredicted RBP28.09■■■□□ 2.09
ERCC2-209ENST00000586856 PRAMEF19Q5SWL8 479 aa28.09■■■□□ 2.09
ERCC2-209ENST00000586856 IGDCC4Q8TDY8 1250 aa28.09■■■□□ 2.09
ERCC2-209ENST00000586856 DIS3LQ8TF46 1054 aaKnown RBP28.09■■■□□ 2.09
ERCC2-209ENST00000586856 POTEB2H3BUK9 544 aa28.08■■■□□ 2.09
ERCC2-209ENST00000586856 MSCO60682 206 aa28.08■■■□□ 2.09
ERCC2-209ENST00000586856 MCM5P33992 734 aa28.08■■■□□ 2.09
ERCC2-209ENST00000586856 GRM4Q14833 912 aa28.08■■■□□ 2.09
ERCC2-209ENST00000586856 ZNF467Q7Z7K2 595 aaPredicted RBP28.08■■■□□ 2.09
ERCC2-209ENST00000586856 ADGRF4Q8IZF3 695 aa28.08■■■□□ 2.09
ERCC2-209ENST00000586856 STAG2Q8N3U4 1231 aa28.08■■■□□ 2.09
ERCC2-209ENST00000586856 MSL3Q8N5Y2 521 aaKnown RBP28.08■■■□□ 2.09
ERCC2-209ENST00000586856 FAM133AQ8N9E0 248 aa28.08■■■□□ 2.09
ERCC2-209ENST00000586856 NRBP1Q9UHY1 535 aa28.08■■■□□ 2.09
ERCC2-209ENST00000586856 DHX16O60231 1041 aaKnown RBP28.07■■■□□ 2.08
ERCC2-209ENST00000586856 CNTN2Q02246 1040 aa28.07■■■□□ 2.08
ERCC2-209ENST00000586856 NSMFQ6X4W1 530 aa28.07■■■□□ 2.08
ERCC2-209ENST00000586856 MTA3Q9BTC8 594 aa28.07■■■□□ 2.08
ERCC2-209ENST00000586856 LY9Q9HBG7 655 aa28.07■■■□□ 2.08
ERCC2-209ENST00000586856 GPHNQ9NQX3 736 aaPredicted RBP28.07■■■□□ 2.08
ERCC2-209ENST00000586856 CYP39A1Q9NYL5 469 aa28.07■■■□□ 2.08
ERCC2-209ENST00000586856 MAD2L2Q9UI95 211 aa28.07■■■□□ 2.08
ERCC2-209ENST00000586856 MKI67P46013 3256 aaKnown RBP28.07■■■□□ 2.08
ERCC2-209ENST00000586856 SYNGAP1Q96PV0 1343 aa28.07■■■□□ 2.08
ERCC2-209ENST00000586856 LRRC37A2A6NM11 1700 aa28.06■■■□□ 2.08
ERCC2-209ENST00000586856 NFIBO00712 420 aa28.06■■■□□ 2.08
ERCC2-209ENST00000586856 SEPT4O43236 478 aa28.06■■■□□ 2.08
ERCC2-209ENST00000586856 MNX1P50219 401 aaPredicted RBP28.06■■■□□ 2.08
ERCC2-209ENST00000586856 MAMDC4Q6UXC1 1216 aa28.06■■■□□ 2.08
ERCC2-209ENST00000586856 PAWRQ96IZ0 340 aaKnown RBP28.06■■■□□ 2.08
ERCC2-209ENST00000586856 CNPY2Q9Y2B0 182 aa28.06■■■□□ 2.08
ERCC2-209ENST00000586856 PALM3A6NDB9 673 aaPredicted RBP28.05■■■□□ 2.08
ERCC2-209ENST00000586856 KLRF2D3W0D1 207 aa28.05■■■□□ 2.08
ERCC2-209ENST00000586856 SH2B2O14492 632 aaPredicted RBP28.05■■■□□ 2.08
ERCC2-209ENST00000586856 TROAPQ12815 778 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms