RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 IFIT3O14879 490 aaKnown RBP25.39■■□□□ 1.66
R3HDM4-202ENST00000586080 ALAS1P13196 640 aa25.39■■□□□ 1.66
R3HDM4-202ENST00000586080 CNGA1P29973 690 aa25.39■■□□□ 1.66
R3HDM4-202ENST00000586080 GPATCH4Q5T3I0 446 aaKnown RBP25.39■■□□□ 1.66
R3HDM4-202ENST00000586080 BTNL9Q6UXG8 535 aa25.39■■□□□ 1.66
R3HDM4-202ENST00000586080 ANKRD35Q8N283 1001 aa25.39■■□□□ 1.66
R3HDM4-202ENST00000586080 CHST13Q8NET6 341 aa25.39■■□□□ 1.66
R3HDM4-202ENST00000586080 MAML3Q96JK9 1138 aa25.39■■□□□ 1.66
R3HDM4-202ENST00000586080 RNF146Q9NTX7 359 aa25.39■■□□□ 1.66
R3HDM4-202ENST00000586080 CCPG1Q9ULG6 757 aa25.39■■□□□ 1.66
R3HDM4-202ENST00000586080 SLC27A2O14975 620 aa25.38■■□□□ 1.65
R3HDM4-202ENST00000586080 FARP2O94887 1054 aaPredicted RBP25.38■■□□□ 1.65
R3HDM4-202ENST00000586080 SART3Q15020 963 aaKnown RBP25.38■■□□□ 1.65
R3HDM4-202ENST00000586080 CHST3Q7LGC8 479 aa25.38■■□□□ 1.65
R3HDM4-202ENST00000586080 RANBP17Q9H2T7 1088 aaKnown RBP25.38■■□□□ 1.65
R3HDM4-202ENST00000586080 ACAD9Q9H845 621 aa25.38■■□□□ 1.65
R3HDM4-202ENST00000586080 TAL1P17542 331 aaPredicted RBP25.37■■□□□ 1.65
R3HDM4-202ENST00000586080 CREB3L3Q68CJ9 461 aa25.37■■□□□ 1.65
R3HDM4-202ENST00000586080 SEC23AQ15436 765 aa25.36■■□□□ 1.65
R3HDM4-202ENST00000586080 ZNF792Q3KQV3 632 aa25.36■■□□□ 1.65
R3HDM4-202ENST00000586080 TKFCQ3LXA3 575 aa25.36■■□□□ 1.65
R3HDM4-202ENST00000586080 TRERF1Q96PN7 1200 aa25.36■■□□□ 1.65
R3HDM4-202ENST00000586080 UBA5Q9GZZ9 404 aa25.36■■□□□ 1.65
R3HDM4-202ENST00000586080 CRISPLD2Q9H0B8 497 aa25.36■■□□□ 1.65
R3HDM4-202ENST00000586080 CPVLQ9H3G5 476 aa25.36■■□□□ 1.65
R3HDM4-202ENST00000586080 ICAM1P05362 532 aa25.35■■□□□ 1.65
R3HDM4-202ENST00000586080 PARP1P09874 1014 aaKnown RBP25.35■■□□□ 1.65
R3HDM4-202ENST00000586080 WTAPQ15007 396 aa25.35■■□□□ 1.65
R3HDM4-202ENST00000586080 ASPRV1Q53RT3 343 aa25.35■■□□□ 1.65
R3HDM4-202ENST00000586080 TMEM67Q5HYA8 995 aa25.35■■□□□ 1.65
R3HDM4-202ENST00000586080 MB21D2Q8IYB1 491 aaPredicted RBP25.35■■□□□ 1.65
R3HDM4-202ENST00000586080 DHX16O60231 1041 aaKnown RBP25.34■■□□□ 1.65
R3HDM4-202ENST00000586080 CYBAP13498 195 aa25.34■■□□□ 1.65
R3HDM4-202ENST00000586080 TRPV1Q8NER1 839 aa25.34■■□□□ 1.65
R3HDM4-202ENST00000586080 DIS3Q9Y2L1 958 aaKnown RBP25.34■■□□□ 1.65
R3HDM4-202ENST00000586080 ANTXR2P58335 489 aa25.33■■□□□ 1.65
R3HDM4-202ENST00000586080 NECTIN1Q15223 517 aa25.33■■□□□ 1.65
R3HDM4-202ENST00000586080 PRAMEF19Q5SWL8 479 aa25.33■■□□□ 1.65
R3HDM4-202ENST00000586080 RNF20Q5VTR2 975 aa25.33■■□□□ 1.65
R3HDM4-202ENST00000586080 TINF2Q9BSI4 451 aa25.33■■□□□ 1.65
R3HDM4-202ENST00000586080 MKI67P46013 3256 aaKnown RBP25.33■■□□□ 1.65
R3HDM4-202ENST00000586080 IGHA2P01877 340 aa25.32■■□□□ 1.64
R3HDM4-202ENST00000586080 CAPN2P17655 700 aa25.32■■□□□ 1.64
R3HDM4-202ENST00000586080 MUM1L1Q5H9M0 696 aa25.32■■□□□ 1.64
R3HDM4-202ENST00000586080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.32■■□□□ 1.643e-6■■■□□ 15.3
R3HDM4-202ENST00000586080 SENP2Q9HC62 589 aa25.32■■□□□ 1.64
R3HDM4-202ENST00000586080 A1CFQ9NQ94 594 aaKnown RBP25.32■■□□□ 1.64
R3HDM4-202ENST00000586080 DDX20Q9UHI6 824 aaKnown RBP25.32■■□□□ 1.64
R3HDM4-202ENST00000586080 DNAJC25-GNG10A0A024R161 153 aa25.31■■□□□ 1.64
R3HDM4-202ENST00000586080 POTEB2H3BUK9 544 aa25.31■■□□□ 1.64
R3HDM4-202ENST00000586080 PRC1O43663 620 aa25.31■■□□□ 1.64
R3HDM4-202ENST00000586080 NSMFQ6X4W1 530 aa25.31■■□□□ 1.64
R3HDM4-202ENST00000586080 DIS3LQ8TF46 1054 aaKnown RBP25.31■■□□□ 1.64
R3HDM4-202ENST00000586080 OGDHLQ9ULD0 1010 aa25.31■■□□□ 1.64
R3HDM4-202ENST00000586080 MCM5P33992 734 aa25.3■■□□□ 1.64
R3HDM4-202ENST00000586080 CDC37Q16543 378 aaPredicted RBP25.3■■□□□ 1.64
R3HDM4-202ENST00000586080 ANO1Q5XXA6 986 aa25.3■■□□□ 1.64
R3HDM4-202ENST00000586080 LHX8Q68G74 356 aa25.3■■□□□ 1.64
R3HDM4-202ENST00000586080 ADGRF4Q8IZF3 695 aa25.3■■□□□ 1.64
R3HDM4-202ENST00000586080 VAT1LQ9HCJ6 419 aa25.3■■□□□ 1.64
R3HDM4-202ENST00000586080 CNPY2Q9Y2B0 182 aa25.3■■□□□ 1.64
R3HDM4-202ENST00000586080 PFASO15067 1338 aa25.3■■□□□ 1.64
R3HDM4-202ENST00000586080 MSCO60682 206 aa25.29■■□□□ 1.64
R3HDM4-202ENST00000586080 CNTN2Q02246 1040 aa25.29■■□□□ 1.64
R3HDM4-202ENST00000586080 USH1GQ495M9 461 aa25.29■■□□□ 1.64
R3HDM4-202ENST00000586080 UBE2Q1Q7Z7E8 422 aa25.29■■□□□ 1.64
R3HDM4-202ENST00000586080 CATIPQ7Z7H3 387 aa25.29■■□□□ 1.64
R3HDM4-202ENST00000586080 STAG2Q8N3U4 1231 aa25.29■■□□□ 1.64
R3HDM4-202ENST00000586080 ANKLE1Q8NAG6 615 aa25.29■■□□□ 1.64
R3HDM4-202ENST00000586080 PAWRQ96IZ0 340 aaKnown RBP25.29■■□□□ 1.64
R3HDM4-202ENST00000586080 PNMA2Q9UL42 364 aa25.29■■□□□ 1.64
R3HDM4-202ENST00000586080 NFXL1Q6ZNB6 911 aa25.28■■□□□ 1.64
R3HDM4-202ENST00000586080 NECAB2Q7Z6G3 386 aa25.28■■□□□ 1.64
R3HDM4-202ENST00000586080 GPHNQ9NQX3 736 aaPredicted RBP25.28■■□□□ 1.64
R3HDM4-202ENST00000586080 WDR19Q8NEZ3 1342 aa25.28■■□□□ 1.64
R3HDM4-202ENST00000586080 KLRF2D3W0D1 207 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 NFIBO00712 420 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 SEPT4O43236 478 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 ZNF467Q7Z7K2 595 aaPredicted RBP25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 MSL3Q8N5Y2 521 aaKnown RBP25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 IGDCC4Q8TDY8 1250 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 NUP133Q8WUM0 1156 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 HTATIP2Q9BUP3 242 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 LY9Q9HBG7 655 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 CYP39A1Q9NYL5 469 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 NRBP1Q9UHY1 535 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 MAD2L2Q9UI95 211 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 ZHX1Q9UKY1 873 aaPredicted RBP25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 SYNGAP1Q96PV0 1343 aa25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 TNRC18O15417 2968 aaPredicted RBP25.27■■□□□ 1.64
R3HDM4-202ENST00000586080 PTPDC1A2A3K4 754 aa25.26■■□□□ 1.63
R3HDM4-202ENST00000586080 MYCNP04198 464 aaPredicted RBP25.26■■□□□ 1.63
R3HDM4-202ENST00000586080 COL9A3Q14050 684 aaPredicted RBP25.26■■□□□ 1.63
R3HDM4-202ENST00000586080 GRM4Q14833 912 aa25.26■■□□□ 1.63
R3HDM4-202ENST00000586080 FAM133AQ8N9E0 248 aa25.26■■□□□ 1.63
R3HDM4-202ENST00000586080 DPF3Q92784 378 aa25.26■■□□□ 1.63
R3HDM4-202ENST00000586080 TMEM87BQ96K49 555 aa25.26■■□□□ 1.63
R3HDM4-202ENST00000586080 FGD4Q96M96 766 aa25.26■■□□□ 1.63
R3HDM4-202ENST00000586080 LRRC2Q9BYS8 371 aa25.26■■□□□ 1.63
R3HDM4-202ENST00000586080 SH2B2O14492 632 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms