RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 FKBP15Q5T1M5 1219 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 NCAPH2Q6IBW4 605 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 NELFCDQ8IXH7 590 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 MMRN2Q9H8L6 949 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 BARHL2Q9NY43 387 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 MTMR4Q9NYA4 1195 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 MAD2L2Q9UI95 211 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 SAMM50Q9Y512 469 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 LRP6O75581 1613 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 IKBKBO14920 756 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 EEF2P13639 858 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 LONP1P36776 959 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 C16orf86Q6ZW13 317 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 ZBTB21Q9ULJ3 1066 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 PCDHA6Q9UN73 950 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 PCDHA8Q9Y5H6 950 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 ATRNO75882 1429 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 FAM170AA1A519 330 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 POTEMA6NI47 508 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 AKR1B15C9JRZ8 316 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 CASQ1P31415 396 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 ASPRV1Q53RT3 343 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 SPECC1LQ69YQ0 1117 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 TYW1BQ6NUM6 668 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 CCDC84Q86UT8 332 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 ZFPM1Q8IX07 1006 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 NIM1KQ8IY84 436 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 PI4KBQ9UBF8 816 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 COL1A1P02452 1464 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 TRIM49BA6NDI0 452 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 TDP2O95551 362 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 HOXA13P31271 388 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 CERS5Q8N5B7 392 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 UBXN4Q92575 508 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 CTAGE1Q96RT6 745 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 OSBPL5Q9H0X9 879 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 LAMB4A4D0S4 1761 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 DDX39AO00148 427 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 ATP2C1P98194 919 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 CYP4A11Q02928 519 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 SPAG1Q07617 926 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 MORC3Q14149 939 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 LRRC41Q15345 812 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 SPATA1Q5VX52 437 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 SARM1Q6SZW1 724 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 CACNA2D4Q7Z3S7 1137 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-208ENST00000585799 CBX1P83916 185 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 PLS1Q14651 629 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 PROM2Q8N271 834 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 HPS3Q969F9 1004 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 TSG101Q99816 390 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 IMPACTQ9P2X3 320 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 PCDHA12Q9UN75 941 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 XIRP1Q702N8 1843 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 CYTH3O43739 400 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 ARID5AQ03989 594 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 TBC1D8BQ0IIM8 1120 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 MCM6Q14566 821 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 GSDMAQ96QA5 445 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 DDX25Q9UHL0 483 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 HPSEQ9Y251 543 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 TEX33O43247 280 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 KRT9P35527 623 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 TDRD12Q587J7 1177 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 CC2D2BQ6DHV5 1058 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 ADGRF4Q8IZF3 695 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 TTLL6Q8N841 843 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 MYRIPQ8NFW9 859 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 SWAP70Q9UH65 585 aa13.97□□□□□ -0.17
SMARCA4-208ENST00000585799 TOGARAM1Q9Y4F4 1720 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 KIF5CO60282 957 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 PDHBP11177 359 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 IL1R1P14778 569 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 SP4Q02446 784 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 ZNF579Q8NAF0 562 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 CAGE1Q8TC20 777 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 CCDC17Q96LX7 622 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 NUP98P52948 1817 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 A0A087X0B3 334 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 STXBP3O00186 592 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 MAEAQ7L5Y9 396 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 TRIML1Q8N9V2 468 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 DISC1Q9NRI5 854 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 TUBE1Q9UJT0 475 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 PAXBP1Q9Y5B6 917 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 ITGB4P16144 1822 aa13.96□□□□□ -0.17
SMARCA4-208ENST00000585799 MYH14Q7Z406 1995 aaKnown RBP13.96□□□□□ -0.18
SMARCA4-208ENST00000585799 KCNJ18B7U540 433 aa13.96□□□□□ -0.18
SMARCA4-208ENST00000585799 KIF2AO00139 706 aaPredicted RBP13.96□□□□□ -0.18
SMARCA4-208ENST00000585799 TRAF5O00463 557 aa13.96□□□□□ -0.18
SMARCA4-208ENST00000585799 ADAMTS3O15072 1205 aa13.96□□□□□ -0.18
SMARCA4-208ENST00000585799 ACTN4O43707 911 aaKnown RBP13.96□□□□□ -0.18
SMARCA4-208ENST00000585799 KCNJ12Q14500 433 aa13.96□□□□□ -0.18
SMARCA4-208ENST00000585799 FBXO11Q86XK2 927 aa13.96□□□□□ -0.18
SMARCA4-208ENST00000585799 ENOX1Q8TC92 643 aaKnown RBP13.96□□□□□ -0.18
SMARCA4-208ENST00000585799 ARHGEF10LQ9HCE6 1279 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms