RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 SHISA4Q96DD7 197 aa19.28■□□□□ 0.68
CDK5RAP3-230ENST00000584042 VPS54Q9P1Q0 977 aa19.28■□□□□ 0.68
CDK5RAP3-230ENST00000584042 PNMA2Q9UL42 364 aa19.28■□□□□ 0.68
CDK5RAP3-230ENST00000584042 PPP1R11O60927 126 aaPredicted RBP19.27■□□□□ 0.68
CDK5RAP3-230ENST00000584042 MMP1P03956 469 aa19.27■□□□□ 0.68
CDK5RAP3-230ENST00000584042 ZSCAN22P10073 491 aaPredicted RBP19.27■□□□□ 0.68
CDK5RAP3-230ENST00000584042 DSG3P32926 999 aa19.27■□□□□ 0.68
CDK5RAP3-230ENST00000584042 MS4A4AQ96JQ5 239 aa19.27■□□□□ 0.68
CDK5RAP3-230ENST00000584042 PHF20Q9BVI0 1012 aa19.27■□□□□ 0.68
CDK5RAP3-230ENST00000584042 AMNQ9BXJ7 453 aa19.27■□□□□ 0.68
CDK5RAP3-230ENST00000584042 SLC38A10Q9HBR0 1119 aa19.27■□□□□ 0.68
CDK5RAP3-230ENST00000584042 SLC45A1Q9Y2W3 748 aa19.27■□□□□ 0.68
CDK5RAP3-230ENST00000584042 F13A1P00488 732 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 CALML3P27482 149 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ZNF157P51786 506 aaPredicted RBP19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 NAPAP54920 295 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 COG2Q14746 738 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 GALNT17Q6IS24 598 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 TYW1BQ6NUM6 668 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 FBXO11Q86XK2 927 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 DAGLBQ8NCG7 672 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 GJB4Q9NTQ9 266 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ADAMTS5Q9UNA0 930 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ZDHHC9Q9Y397 364 aa19.26■□□□□ 0.67
CDK5RAP3-230ENST00000584042 CCL15-CCL14A0A0B4J2E2 113 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 SPDYE16A6NNV3 312 aaPredicted RBP19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 OAZ1P54368 228 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 IRX3P78415 501 aaPredicted RBP19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 GUCY1B3Q02153 619 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 SAFBQ15424 915 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 CCL15Q16663 113 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 OTUD7BQ6GQQ9 843 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 GPAT2Q6NUI2 795 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 LBX2Q6XYB7 198 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 TEX2Q8IWB9 1127 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 BRI3BPQ8WY22 251 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ATG4CQ96DT6 458 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ZMYND12Q9H0C1 365 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 BRMS1Q9HCU9 246 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 PNMA3Q9UL41 463 aa19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ABT1Q9ULW3 272 aaKnown RBP19.25■□□□□ 0.67
CDK5RAP3-230ENST00000584042 TESPA1A2RU30 521 aaPredicted RBP19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 VWA5AO00534 786 aa19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ICAM1P05362 532 aa19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 KIF23Q02241 960 aaPredicted RBP19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 NPY5RQ15761 445 aa19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ANKRD23Q86SG2 305 aa19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 REPS2Q8NFH8 660 aa19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 CCDC102AQ96A19 550 aa19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 HOXC10Q9NYD6 342 aa19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 KCNJ14Q9UNX9 436 aa19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ZNF536O15090 1300 aa19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ABCB11O95342 1321 aa19.24■□□□□ 0.67
CDK5RAP3-230ENST00000584042 MANSC4A6NHS7 340 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ATP2A1O14983 1001 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ZBED4O75132 1171 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 OSBPP22059 807 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 KRT2P35908 639 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 APLP1P51693 650 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 NLRP5P59047 1200 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 MKRN3Q13064 507 aaKnown RBP19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 RESTQ13127 1097 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 CCDC174Q6PII3 467 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 DIS3L2Q8IYB7 885 aaKnown RBP19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 MB21D1Q8N884 522 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 GTF3C2Q8WUA4 911 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 GLT8D2Q9H1C3 349 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ASCC2Q9H1I8 757 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 FOXP1Q9H334 677 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ZSCAN16Q9H4T2 348 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ZCCHC17Q9NP64 241 aaKnown RBP19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 CREBZFQ9NS37 354 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 PCDHA4Q9UN74 947 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 PCDHA1Q9Y5I3 950 aa19.23■□□□□ 0.67
CDK5RAP3-230ENST00000584042 FAM155AB1AL88 458 aaPredicted RBP19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 GNA11P29992 359 aa19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 SNAP25P60880 206 aa19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 SAMD1Q6SPF0 538 aaPredicted RBP19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 BRAPQ7Z569 592 aa19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 COA7Q96BR5 231 aa19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 C6orf50Q9HD87 102 aa19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 CCPG1Q9ULG6 757 aa19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 CTDP1Q9Y5B0 961 aaPredicted RBP19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ATP6V1DQ9Y5K8 247 aa19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 THSD7BQ9C0I4 1608 aa19.22■□□□□ 0.67
CDK5RAP3-230ENST00000584042 RASSF10A6NK89 507 aa19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 BTBD19C9JJ37 291 aa19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 U2AF2P26368 475 aaKnown RBP eCLIP19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ADCY7P51828 1080 aa19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 HERVK_113P62684 666 aa19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 USH1GQ495M9 461 aa19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 MCTP1Q6DN14 999 aa19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 FERMT3Q86UX7 667 aa19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 BLIDQ8IZY5 108 aa19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 BICD2Q8TD16 824 aa19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 ZNF214Q9UL59 606 aaPredicted RBP19.21■□□□□ 0.67
CDK5RAP3-230ENST00000584042 SMCO2A6NFE2 343 aa19.2■□□□□ 0.66
CDK5RAP3-230ENST00000584042 KIF28PB7ZC32 967 aa19.2■□□□□ 0.66
CDK5RAP3-230ENST00000584042 TNPO1Q92973 898 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-230ENST00000584042 CUL5Q93034 780 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms