RNA–Protein interactions for RNA: ENST00000583053.1

CCDC57-217, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC57, Length 188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-217ENST00000583053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC57-217ENST00000583053 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
CCDC57-217ENST00000583053 U2AF1L4Q8WU68 220 aaKnown RBP16.04■□□□□ 0.16
CCDC57-217ENST00000583053 DDX11Q96FC9 970 aa16.04■□□□□ 0.16
CCDC57-217ENST00000583053 AGBL1Q96MI9 1066 aa16.04■□□□□ 0.16
CCDC57-217ENST00000583053 DEFB118Q96PH6 123 aa16.04■□□□□ 0.16
CCDC57-217ENST00000583053 DIS3Q9Y2L1 958 aaKnown RBP16.04■□□□□ 0.16
CCDC57-217ENST00000583053 IGHA2P01877 340 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 ICAM1P05362 532 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 PGK2P07205 417 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 MCM5P33992 734 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 ANTXR2P58335 489 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 WTAPQ15007 396 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 ZNF792Q3KQV3 632 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 TMEM67Q5HYA8 995 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 ANKRD35Q8N283 1001 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 IGDCC4Q8TDY8 1250 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 MAML3Q96JK9 1138 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 MTA3Q9BTC8 594 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 ACAD9Q9H845 621 aa16.03■□□□□ 0.16
CCDC57-217ENST00000583053 PARP1P09874 1014 aaKnown RBP16.02■□□□□ 0.16
CCDC57-217ENST00000583053 ALAS1P13196 640 aa16.02■□□□□ 0.16
CCDC57-217ENST00000583053 CYP2C19P33261 490 aa16.02■□□□□ 0.16
CCDC57-217ENST00000583053 SHISA4Q96DD7 197 aa16.02■□□□□ 0.16
CCDC57-217ENST00000583053 TRERF1Q96PN7 1200 aa16.02■□□□□ 0.16
CCDC57-217ENST00000583053 UBA5Q9GZZ9 404 aa16.02■□□□□ 0.16
CCDC57-217ENST00000583053 HOMER2Q9NSB8 354 aa16.02■□□□□ 0.16
CCDC57-217ENST00000583053 RNF146Q9NTX7 359 aa16.02■□□□□ 0.16
CCDC57-217ENST00000583053 PNMA2Q9UL42 364 aa16.02■□□□□ 0.16
CCDC57-217ENST00000583053 CCPG1Q9ULG6 757 aa16.02■□□□□ 0.16
CCDC57-217ENST00000583053 ZNF236Q9UL36 1845 aa16.01■□□□□ 0.15
CCDC57-217ENST00000583053 DOCK3Q8IZD9 2030 aa16.01■□□□□ 0.15
CCDC57-217ENST00000583053 DNAJC25-GNG10A0A024R161 153 aa16.01■□□□□ 0.15
CCDC57-217ENST00000583053 PRC1O43663 620 aa16.01■□□□□ 0.15
CCDC57-217ENST00000583053 REC8O95072 547 aa16.01■□□□□ 0.15
CCDC57-217ENST00000583053 TFRCP02786 760 aaKnown RBP16.01■□□□□ 0.15
CCDC57-217ENST00000583053 CCND3P30281 292 aaPredicted RBP16.01■□□□□ 0.15
CCDC57-217ENST00000583053 TSGA10IPQ3SY00 556 aa16.01■□□□□ 0.15
CCDC57-217ENST00000583053 TMEM87BQ96K49 555 aa16.01■□□□□ 0.15
CCDC57-217ENST00000583053 CRISPLD2Q9H0B8 497 aa16.01■□□□□ 0.15
CCDC57-217ENST00000583053 KRT32Q14532 448 aa16■□□□□ 0.15
CCDC57-217ENST00000583053 CATIPQ7Z7H3 387 aa16■□□□□ 0.15
CCDC57-217ENST00000583053 ADGRF4Q8IZF3 695 aa16■□□□□ 0.15
CCDC57-217ENST00000583053 TMTC2Q8N394 836 aa16■□□□□ 0.15
CCDC57-217ENST00000583053 NEK1Q96PY6 1258 aa16■□□□□ 0.15
CCDC57-217ENST00000583053 CPVLQ9H3G5 476 aa16■□□□□ 0.15
CCDC57-217ENST00000583053 SENP2Q9HC62 589 aa16■□□□□ 0.15
CCDC57-217ENST00000583053 COL11A1P12107 1806 aaPredicted RBP16■□□□□ 0.15
CCDC57-217ENST00000583053 WDR19Q8NEZ3 1342 aa15.99■□□□□ 0.15
CCDC57-217ENST00000583053 PALM3A6NDB9 673 aaPredicted RBP15.99■□□□□ 0.15
CCDC57-217ENST00000583053 KLRF2D3W0D1 207 aa15.99■□□□□ 0.15
CCDC57-217ENST00000583053 TROAPQ12815 778 aa15.99■□□□□ 0.15
CCDC57-217ENST00000583053 COL9A3Q14050 684 aaPredicted RBP15.99■□□□□ 0.15
CCDC57-217ENST00000583053 MUM1L1Q5H9M0 696 aa15.99■□□□□ 0.15
CCDC57-217ENST00000583053 ZNF467Q7Z7K2 595 aaPredicted RBP15.99■□□□□ 0.15
CCDC57-217ENST00000583053 RASEFQ8IZ41 740 aa15.99■□□□□ 0.15
CCDC57-217ENST00000583053 STAG2Q8N3U4 1231 aa15.99■□□□□ 0.15
CCDC57-217ENST00000583053 MSL3Q8N5Y2 521 aaKnown RBP15.99■□□□□ 0.15
CCDC57-217ENST00000583053 TINF2Q9BSI4 451 aa15.99■□□□□ 0.15
CCDC57-217ENST00000583053 LY9Q9HBG7 655 aa15.99■□□□□ 0.15
CCDC57-217ENST00000583053 A1CFQ9NQ94 594 aaKnown RBP15.99■□□□□ 0.15
CCDC57-217ENST00000583053 MAD2L2Q9UI95 211 aa15.99■□□□□ 0.15
CCDC57-217ENST00000583053 PFASO15067 1338 aa15.98■□□□□ 0.15
CCDC57-217ENST00000583053 RBBP6Q7Z6E9 1792 aaKnown RBP15.98■□□□□ 0.15
CCDC57-217ENST00000583053 POTEB2H3BUK9 544 aa15.98■□□□□ 0.15
CCDC57-217ENST00000583053 SH2B2O14492 632 aaPredicted RBP15.98■□□□□ 0.15
CCDC57-217ENST00000583053 EPB41L2O43491 1005 aaKnown RBP15.98■□□□□ 0.15
CCDC57-217ENST00000583053 DHX16O60231 1041 aaKnown RBP15.98■□□□□ 0.15
CCDC57-217ENST00000583053 CYBAP13498 195 aa15.98■□□□□ 0.15
CCDC57-217ENST00000583053 CNGA1P29973 690 aa15.98■□□□□ 0.15
CCDC57-217ENST00000583053 HSPA4P34932 840 aa15.98■□□□□ 0.15
CCDC57-217ENST00000583053 LIFRP42702 1097 aa15.98■□□□□ 0.15
CCDC57-217ENST00000583053 GRM4Q14833 912 aa15.98■□□□□ 0.15
CCDC57-217ENST00000583053 LHX8Q68G74 356 aa15.98■□□□□ 0.15
CCDC57-217ENST00000583053 JMJD4Q9H9V9 463 aa15.98■□□□□ 0.15
CCDC57-217ENST00000583053 GPHNQ9NQX3 736 aaPredicted RBP15.98■□□□□ 0.15
CCDC57-217ENST00000583053 NRBP1Q9UHY1 535 aa15.98■□□□□ 0.15
CCDC57-217ENST00000583053 CCDC69A6NI79 296 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 MSCO60682 206 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 HMGB1P09429 215 aaKnown RBP15.97■□□□□ 0.15
CCDC57-217ENST00000583053 TAL1P17542 331 aaPredicted RBP15.97■□□□□ 0.15
CCDC57-217ENST00000583053 CDC37Q16543 378 aaPredicted RBP15.97■□□□□ 0.15
CCDC57-217ENST00000583053 ADCK5Q3MIX3 580 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 PRAMEF19Q5SWL8 479 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 MAMDC4Q6UXC1 1216 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 NFXL1Q6ZNB6 911 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 DHX32Q7L7V1 743 aaKnown RBP15.97■□□□□ 0.15
CCDC57-217ENST00000583053 FAM133AQ8N9E0 248 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 ANKLE1Q8NAG6 615 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 TRPV1Q8NER1 839 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 KCNB2Q92953 911 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 MAP3K14Q99558 947 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 VAT1LQ9HCJ6 419 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 CYP39A1Q9NYL5 469 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 DDX20Q9UHI6 824 aaKnown RBP15.97■□□□□ 0.15
CCDC57-217ENST00000583053 OGDHLQ9ULD0 1010 aa15.97■□□□□ 0.15
CCDC57-217ENST00000583053 SYNGAP1Q96PV0 1343 aa15.96■□□□□ 0.15
CCDC57-217ENST00000583053 DDAH1O94760 285 aa15.96■□□□□ 0.15
CCDC57-217ENST00000583053 EXOSC10Q01780 885 aaKnown RBP15.96■□□□□ 0.15
CCDC57-217ENST00000583053 CNTN2Q02246 1040 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms