RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 DNAJC25Q9H1X3 360 aa14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PCDHA7Q9UN72 937 aa14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 MYH15Q9Y2K3 1946 aa14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 GLTPD2A6NH11 291 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 POTECB2RU33 542 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 GRIN3BO60391 1043 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 EPHX2P34913 555 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 FAM83BQ5T0W9 1011 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 BRAPQ7Z569 592 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 LZTS2Q9BRK4 669 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 KCNF1Q9H3M0 494 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 TMX2Q9Y320 296 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ASNSP08243 561 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 KRT2P35908 639 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 FMR1Q06787 632 aaKnown RBP eCLIP14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 MOB2Q70IA6 237 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ARHGEF10LQ9HCE6 1279 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 FBXO28Q9NVF7 368 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 BARHL2Q9NY43 387 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SEC63Q9UGP8 760 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PYCARDQ9ULZ3 195 aa14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 DICER1Q9UPY3 1922 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-217ENST00000580287 A0A1B0GVL5 298 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 NAPAP54920 295 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PIK3AP1Q6ZUJ8 805 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 KRT26Q7Z3Y9 468 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 DCPSQ96C86 337 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 FOXP1Q9H334 677 aaPredicted RBP14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 CBX8Q9HC52 389 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 RTEL1Q9NZ71 1219 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 NRBP1Q9UHY1 535 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PCDHB6Q9Y5E3 794 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 GREB1LQ9C091 1923 aaPredicted RBP14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 BMP3P12645 472 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 GPATCH4Q5T3I0 446 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ANO1Q5XXA6 986 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 LINC00301Q8NCQ3 95 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 FEZ1Q99689 392 aa14.49□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SPTLC2O15270 562 aa14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 FAM160A1Q05DH4 1040 aa14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SULF1Q8IWU6 871 aa14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 GMCL1P1Q8NEA9 526 aa14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 MRPS27Q92552 414 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 POLR2AP24928 1970 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SMCO2A6NFE2 343 aa14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SOCS7O14512 581 aa14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 CTNND1O60716 968 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SPP2Q13103 211 aa14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 TNFRSF25Q93038 417 aa14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SDF4Q9BRK5 362 aa14.48□□□□□ -0.09
CDK5RAP3-217ENST00000580287 TRIM75PA6NK02 468 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ZNF165P49910 485 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 LRMPQ12912 555 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 NOLC1Q14978 699 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 QRICH1Q2TAL8 776 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 BLIDQ8IZY5 108 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 KCNG4Q8TDN1 519 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 DCAF4Q8WV16 495 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 KLRG1Q96E93 195 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 L3MBTL3Q96JM7 780 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 TMEM260Q9NX78 707 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SSC5DA1L4H1 1573 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 MYH4Q9Y623 1939 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PTGS1P23219 599 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SNW1Q13573 536 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 MTMR2Q13614 643 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PPP4R3BQ5MIZ7 849 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 MTERF4Q7Z6M4 381 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 KIFC2Q96AC6 838 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 GMCL1Q96IK5 515 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 CLIC6Q96NY7 704 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 TAF1DQ9H5J8 278 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 VCPKMTQ9H867 229 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 POLR3EQ9NVU0 708 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 BIN2Q9UBW5 565 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ZHX2Q9Y6X8 837 aa14.47□□□□□ -0.09
CDK5RAP3-217ENST00000580287 USP2O75604 605 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 GRIN1Q05586 938 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ZNF174Q15697 407 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 CDC37Q16543 378 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 USH1GQ495M9 461 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SPECC1Q5M775 1068 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 DCAF15Q66K64 600 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ADALQ6DHV7 355 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 RBM43Q6ZSC3 357 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ZNF526Q8TF50 670 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PCDHA4Q9UN74 947 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PNMA6FA0A0J9YX94 578 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ZBTB5O15062 677 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 NDUFA8P51970 172 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PTPAQ15257 358 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 JAKMIP3Q5VZ66 844 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ZFP91Q96JP5 570 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PRR12Q9ULL5 1215 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PCDHA6Q9UN73 950 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PCDHA8Q9Y5H6 950 aa14.46□□□□□ -0.09
CDK5RAP3-217ENST00000580287 YEATS4O95619 227 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 SMARCA1P28370 1054 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 UBE2SQ16763 222 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 C11orf57Q6ZUT1 292 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms