RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 CTCFLQ8NI51 663 aaPredicted RBP17.93■□□□□ 0.46
IFT20-208ENST00000578985 UPF3BQ9BZI7 483 aaKnown RBP17.93■□□□□ 0.46
IFT20-208ENST00000578985 BRPF3Q9ULD4 1205 aa17.93■□□□□ 0.46
IFT20-208ENST00000578985 PTCH2Q9Y6C5 1203 aa17.93■□□□□ 0.46
IFT20-208ENST00000578985 IVNS1ABPQ9Y6Y0 642 aa17.93■□□□□ 0.46
IFT20-208ENST00000578985 ZNF536O15090 1300 aa17.93■□□□□ 0.46
IFT20-208ENST00000578985 DHX16O60231 1041 aaKnown RBP17.92■□□□□ 0.46
IFT20-208ENST00000578985 PTPREP23469 700 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 KIF5BP33176 963 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 MORN1Q5T089 497 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 APOA5Q6Q788 366 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 RAB11FIP4Q86YS3 637 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 FBXL16Q8N461 479 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 RAET1EQ8TD07 263 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 SOCS4Q8WXH5 440 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 IL17RAQ96F46 866 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 AGBL1Q96MI9 1066 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 NUDT12Q9BQG2 462 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 RIPK3Q9Y572 518 aa17.92■□□□□ 0.46
IFT20-208ENST00000578985 KLF18A0A0U1RQI7 1052 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 STRNO43815 780 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 ICAM1P05362 532 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 RXRAP19793 462 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 APOBRQ0VD83 1088 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 TKFCQ3LXA3 575 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 MICU3Q86XE3 530 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 CCDC144CPQ8IYA2 1237 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 BRF1Q92994 677 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 AGXT2Q9BYV1 514 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 JMJD4Q9H9V9 463 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 PDRG1Q9NUG6 133 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 CCPG1Q9ULG6 757 aa17.91■□□□□ 0.46
IFT20-208ENST00000578985 NAP1L2Q9ULW6 460 aaPredicted RBP17.91■□□□□ 0.46
IFT20-208ENST00000578985 ZBTB43O43298 467 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 FCER1AP12319 257 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 ALAS1P13196 640 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 GNAQP50148 359 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 MAP2K5Q13163 448 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 IRF5Q13568 498 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 GRB14Q14449 540 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 CDC37Q16543 378 aaPredicted RBP17.9■□□□□ 0.46
IFT20-208ENST00000578985 FANCBQ8NB91 859 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 CHST13Q8NET6 341 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 USP6NLQ92738 828 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 MMP19Q99542 508 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 LZTS2Q9BRK4 669 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 PNMA2Q9UL42 364 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 ZNF236Q9UL36 1845 aa17.9■□□□□ 0.46
IFT20-208ENST00000578985 ADCY3O60266 1144 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 CYP2B6P20813 491 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 RGS2P41220 211 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 SLC35G1Q2M3R5 365 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 NBPF11Q86T75 865 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 ABRAQ8N0Z2 381 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 TRERF1Q96PN7 1200 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 C22orf23Q9BZE7 217 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 RIOX1Q9H6W3 641 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
IFT20-208ENST00000578985 HOMER2Q9NSB8 354 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 RNF146Q9NTX7 359 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 FBXO40Q9UH90 709 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 HPS5Q9UPZ3 1129 aa17.89■□□□□ 0.45
IFT20-208ENST00000578985 TAL1P17542 331 aaPredicted RBP17.88■□□□□ 0.45
IFT20-208ENST00000578985 SMARCA1P28370 1054 aa17.88■□□□□ 0.45
IFT20-208ENST00000578985 ADORA2AP29274 412 aa17.88■□□□□ 0.45
IFT20-208ENST00000578985 RCAN1P53805 252 aa17.88■□□□□ 0.45
IFT20-208ENST00000578985 TOB2Q14106 344 aaPredicted RBP17.88■□□□□ 0.45
IFT20-208ENST00000578985 KCTD2Q14681 263 aa17.88■□□□□ 0.45
IFT20-208ENST00000578985 RTN1Q16799 776 aa17.88■□□□□ 0.45
IFT20-208ENST00000578985 QRICH1Q2TAL8 776 aa17.88■□□□□ 0.45
IFT20-208ENST00000578985 MTMR8Q96EF0 704 aa17.88■□□□□ 0.45
IFT20-208ENST00000578985 ACAD9Q9H845 621 aa17.88■□□□□ 0.45
IFT20-208ENST00000578985 PLXNA1Q9UIW2 1896 aa17.88■□□□□ 0.45
IFT20-208ENST00000578985 GOLGA8AA7E2F4 631 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 GOLGA8BA8MQT2 603 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 CYTH3O43739 400 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 PLEKHA8P1O95397 391 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 SLC34A2O95436 690 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 XRCC5P13010 732 aaKnown RBP17.87■□□□□ 0.45
IFT20-208ENST00000578985 GRK4P32298 578 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 SLC9C1Q4G0N8 1177 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.87■□□□□ 0.45
IFT20-208ENST00000578985 DPP9Q86TI2 863 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 FBXO11Q86XK2 927 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 SRBD1Q8N5C6 995 aaKnown RBP17.87■□□□□ 0.45
IFT20-208ENST00000578985 SLAIN1Q8ND83 568 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 APBA2Q99767 749 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 SPZ1Q9BXG8 430 aa17.87■□□□□ 0.45
IFT20-208ENST00000578985 RBM28Q9NW13 759 aaKnown RBP17.87■□□□□ 0.45
IFT20-208ENST00000578985 ZBTB5O15062 677 aa17.86■□□□□ 0.45
IFT20-208ENST00000578985 COBLO75128 1261 aa17.86■□□□□ 0.45
IFT20-208ENST00000578985 ELNP15502 786 aa17.86■□□□□ 0.45
IFT20-208ENST00000578985 EVCP57679 992 aa17.86■□□□□ 0.45
IFT20-208ENST00000578985 USH1GQ495M9 461 aa17.86■□□□□ 0.45
IFT20-208ENST00000578985 MUM1L1Q5H9M0 696 aa17.86■□□□□ 0.45
IFT20-208ENST00000578985 TMTC3Q6ZXV5 915 aa17.86■□□□□ 0.45
IFT20-208ENST00000578985 HOMER1Q86YM7 354 aa17.86■□□□□ 0.45
IFT20-208ENST00000578985 ANKRD35Q8N283 1001 aa17.86■□□□□ 0.45
IFT20-208ENST00000578985 PXYLP1Q8TE99 480 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms