RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 SNAP25P60880 206 aa27.03■■□□□ 1.92
LIMD2-204ENST00000578297 CCDC174Q6PII3 467 aa27.03■■□□□ 1.92
LIMD2-204ENST00000578297 RPTORQ8N122 1335 aa27.03■■□□□ 1.92
LIMD2-204ENST00000578297 PAK6Q9NQU5 681 aaPredicted RBP27.03■■□□□ 1.92
LIMD2-204ENST00000578297 REC8O95072 547 aa27.02■■□□□ 1.92
LIMD2-204ENST00000578297 PARP1P09874 1014 aaKnown RBP27.02■■□□□ 1.92
LIMD2-204ENST00000578297 EN2P19622 333 aaPredicted RBP27.02■■□□□ 1.92
LIMD2-204ENST00000578297 TKFCQ3LXA3 575 aa27.02■■□□□ 1.92
LIMD2-204ENST00000578297 TMEM67Q5HYA8 995 aa27.02■■□□□ 1.92
LIMD2-204ENST00000578297 OLFML2BQ68BL8 750 aa27.02■■□□□ 1.92
LIMD2-204ENST00000578297 HMX1Q9NP08 348 aaPredicted RBP27.02■■□□□ 1.92
LIMD2-204ENST00000578297 PRC1O43663 620 aa27.01■■□□□ 1.91
LIMD2-204ENST00000578297 ICAM1P05362 532 aa27.01■■□□□ 1.91
LIMD2-204ENST00000578297 PRKAR2AP13861 404 aaKnown RBP27.01■■□□□ 1.91
LIMD2-204ENST00000578297 CACNB2Q08289 660 aaPredicted RBP27.01■■□□□ 1.91
LIMD2-204ENST00000578297 MFSD14CQ5VZR4 134 aa27.01■■□□□ 1.91
LIMD2-204ENST00000578297 SENP2Q9HC62 589 aa27.01■■□□□ 1.91
LIMD2-204ENST00000578297 DIS3Q9Y2L1 958 aaKnown RBP27.01■■□□□ 1.91
LIMD2-204ENST00000578297 PGK2P07205 417 aa27■■□□□ 1.91
LIMD2-204ENST00000578297 GJA8P48165 433 aa27■■□□□ 1.91
LIMD2-204ENST00000578297 ZNF792Q3KQV3 632 aa27■■□□□ 1.91
LIMD2-204ENST00000578297 RASEFQ8IZ41 740 aa27■■□□□ 1.91
LIMD2-204ENST00000578297 MAML3Q96JK9 1138 aa27■■□□□ 1.91
LIMD2-204ENST00000578297 TMEM87BQ96K49 555 aa27■■□□□ 1.91
LIMD2-204ENST00000578297 UBA5Q9GZZ9 404 aa27■■□□□ 1.91
LIMD2-204ENST00000578297 XRN2Q9H0D6 950 aaKnown RBP eCLIP27■■□□□ 1.91
LIMD2-204ENST00000578297 ACAD9Q9H845 621 aa27■■□□□ 1.91
LIMD2-204ENST00000578297 COL9A3Q14050 684 aaPredicted RBP26.99■■□□□ 1.91
LIMD2-204ENST00000578297 KCNB2Q92953 911 aa26.99■■□□□ 1.91
LIMD2-204ENST00000578297 DDX11Q96FC9 970 aa26.99■■□□□ 1.91
LIMD2-204ENST00000578297 TRERF1Q96PN7 1200 aa26.99■■□□□ 1.91
LIMD2-204ENST00000578297 LY9Q9HBG7 655 aa26.99■■□□□ 1.91
LIMD2-204ENST00000578297 HOMER2Q9NSB8 354 aa26.99■■□□□ 1.91
LIMD2-204ENST00000578297 RNF146Q9NTX7 359 aa26.99■■□□□ 1.91
LIMD2-204ENST00000578297 PNMA2Q9UL42 364 aa26.99■■□□□ 1.91
LIMD2-204ENST00000578297 CCPG1Q9ULG6 757 aa26.99■■□□□ 1.91
LIMD2-204ENST00000578297 DNAJC25-GNG10A0A024R161 153 aa26.98■■□□□ 1.91
LIMD2-204ENST00000578297 EPB41L2O43491 1005 aaKnown RBP26.98■■□□□ 1.91
LIMD2-204ENST00000578297 ALAS1P13196 640 aa26.98■■□□□ 1.91
LIMD2-204ENST00000578297 MLLT1Q03111 559 aaPredicted RBP26.98■■□□□ 1.91
LIMD2-204ENST00000578297 KRT32Q14532 448 aa26.98■■□□□ 1.91
LIMD2-204ENST00000578297 ANKRD35Q8N283 1001 aa26.98■■□□□ 1.91
LIMD2-204ENST00000578297 TMTC2Q8N394 836 aa26.98■■□□□ 1.91
LIMD2-204ENST00000578297 NEK1Q96PY6 1258 aa26.98■■□□□ 1.91
LIMD2-204ENST00000578297 SGPL1O95470 568 aa26.97■■□□□ 1.91
LIMD2-204ENST00000578297 CAPN2P17655 700 aa26.97■■□□□ 1.91
LIMD2-204ENST00000578297 HSPA4P34932 840 aa26.97■■□□□ 1.91
LIMD2-204ENST00000578297 TROAPQ12815 778 aa26.97■■□□□ 1.91
LIMD2-204ENST00000578297 CATIPQ7Z7H3 387 aa26.97■■□□□ 1.91
LIMD2-204ENST00000578297 ADGRF4Q8IZF3 695 aa26.97■■□□□ 1.91
LIMD2-204ENST00000578297 STAG2Q8N3U4 1231 aa26.97■■□□□ 1.91
LIMD2-204ENST00000578297 U2AF1L4Q8WU68 220 aaKnown RBP26.97■■□□□ 1.91
LIMD2-204ENST00000578297 DEFB118Q96PH6 123 aa26.97■■□□□ 1.91
LIMD2-204ENST00000578297 CPVLQ9H3G5 476 aa26.97■■□□□ 1.91
LIMD2-204ENST00000578297 MAD2L2Q9UI95 211 aa26.97■■□□□ 1.91
LIMD2-204ENST00000578297 PLXNA1Q9UIW2 1896 aa26.96■■□□□ 1.91
LIMD2-204ENST00000578297 PALM3A6NDB9 673 aaPredicted RBP26.96■■□□□ 1.91
LIMD2-204ENST00000578297 SH2B2O14492 632 aaPredicted RBP26.96■■□□□ 1.91
LIMD2-204ENST00000578297 CYP2C19P33261 490 aa26.96■■□□□ 1.91
LIMD2-204ENST00000578297 LIFRP42702 1097 aa26.96■■□□□ 1.91
LIMD2-204ENST00000578297 SHISA4Q96DD7 197 aa26.96■■□□□ 1.91
LIMD2-204ENST00000578297 GPHNQ9NQX3 736 aaPredicted RBP26.96■■□□□ 1.91
LIMD2-204ENST00000578297 WDR19Q8NEZ3 1342 aa26.95■■□□□ 1.91
LIMD2-204ENST00000578297 KLRF2D3W0D1 207 aa26.95■■□□□ 1.9
LIMD2-204ENST00000578297 GRM4Q14833 912 aa26.95■■□□□ 1.9
LIMD2-204ENST00000578297 ADCK5Q3MIX3 580 aa26.95■■□□□ 1.9
LIMD2-204ENST00000578297 MUM1L1Q5H9M0 696 aa26.95■■□□□ 1.9
LIMD2-204ENST00000578297 SMCHD1A6NHR9 2005 aa26.94■■□□□ 1.9
LIMD2-204ENST00000578297 MKI67P46013 3256 aaKnown RBP26.94■■□□□ 1.9
LIMD2-204ENST00000578297 CCND3P30281 292 aaPredicted RBP26.94■■□□□ 1.9
LIMD2-204ENST00000578297 MAP3K14Q99558 947 aa26.94■■□□□ 1.9
LIMD2-204ENST00000578297 CRISPLD2Q9H0B8 497 aa26.94■■□□□ 1.9
LIMD2-204ENST00000578297 A1CFQ9NQ94 594 aaKnown RBP26.94■■□□□ 1.9
LIMD2-204ENST00000578297 PFASO15067 1338 aa26.93■■□□□ 1.9
LIMD2-204ENST00000578297 HMGB1P09429 215 aaKnown RBP26.93■■□□□ 1.9
LIMD2-204ENST00000578297 EXOSC10Q01780 885 aaKnown RBP26.93■■□□□ 1.9
LIMD2-204ENST00000578297 CDC37Q16543 378 aaPredicted RBP26.93■■□□□ 1.9
LIMD2-204ENST00000578297 DHX32Q7L7V1 743 aaKnown RBP26.93■■□□□ 1.9
LIMD2-204ENST00000578297 ZNF467Q7Z7K2 595 aaPredicted RBP26.93■■□□□ 1.9
LIMD2-204ENST00000578297 ZNF654Q8IZM8 581 aa26.93■■□□□ 1.9
LIMD2-204ENST00000578297 MSL3Q8N5Y2 521 aaKnown RBP26.93■■□□□ 1.9
LIMD2-204ENST00000578297 TINF2Q9BSI4 451 aa26.93■■□□□ 1.9
LIMD2-204ENST00000578297 JMJD4Q9H9V9 463 aa26.93■■□□□ 1.9
LIMD2-204ENST00000578297 CCDC69A6NI79 296 aa26.92■■□□□ 1.9
LIMD2-204ENST00000578297 DDAH1O94760 285 aa26.92■■□□□ 1.9
LIMD2-204ENST00000578297 TFRCP02786 760 aaKnown RBP26.92■■□□□ 1.9
LIMD2-204ENST00000578297 CYBAP13498 195 aa26.92■■□□□ 1.9
LIMD2-204ENST00000578297 TAL1P17542 331 aaPredicted RBP26.92■■□□□ 1.9
LIMD2-204ENST00000578297 NFXL1Q6ZNB6 911 aa26.92■■□□□ 1.9
LIMD2-204ENST00000578297 LRRC2Q9BYS8 371 aa26.92■■□□□ 1.9
LIMD2-204ENST00000578297 SNX14Q9Y5W7 946 aa26.92■■□□□ 1.9
LIMD2-204ENST00000578297 DHX16O60231 1041 aaKnown RBP26.91■■□□□ 1.9
LIMD2-204ENST00000578297 MAMDC4Q6UXC1 1216 aa26.91■■□□□ 1.9
LIMD2-204ENST00000578297 TRPV1Q8NER1 839 aa26.91■■□□□ 1.9
LIMD2-204ENST00000578297 USP26Q9BXU7 913 aa26.91■■□□□ 1.9
LIMD2-204ENST00000578297 VAT1LQ9HCJ6 419 aa26.91■■□□□ 1.9
LIMD2-204ENST00000578297 CYP39A1Q9NYL5 469 aa26.91■■□□□ 1.9
LIMD2-204ENST00000578297 NRBP1Q9UHY1 535 aa26.91■■□□□ 1.9
LIMD2-204ENST00000578297 POTEB2H3BUK9 544 aa26.9■■□□□ 1.9
LIMD2-204ENST00000578297 QRICH1Q2TAL8 776 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms