RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 NPLOC4Q8TAT6 608 aa25.95■■□□□ 1.74
SMARCD2-206ENST00000577990 DEFB118Q96PH6 123 aa25.95■■□□□ 1.74
SMARCD2-206ENST00000577990 COBLO75128 1261 aa25.94■■□□□ 1.74
SMARCD2-206ENST00000577990 MCM5P33992 734 aa25.94■■□□□ 1.74
SMARCD2-206ENST00000577990 CHST13Q8NET6 341 aa25.94■■□□□ 1.74
SMARCD2-206ENST00000577990 AGBL1Q96MI9 1066 aa25.94■■□□□ 1.74
SMARCD2-206ENST00000577990 MTA3Q9BTC8 594 aa25.94■■□□□ 1.74
SMARCD2-206ENST00000577990 SLC5A4Q9NY91 659 aa25.94■■□□□ 1.74
SMARCD2-206ENST00000577990 FBXO40Q9UH90 709 aa25.94■■□□□ 1.74
SMARCD2-206ENST00000577990 PRC1O43663 620 aa25.93■■□□□ 1.74
SMARCD2-206ENST00000577990 SLC34A2O95436 690 aa25.93■■□□□ 1.74
SMARCD2-206ENST00000577990 PARP1P09874 1014 aaKnown RBP25.93■■□□□ 1.74
SMARCD2-206ENST00000577990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.93■■□□□ 1.741e-9■■■■□ 22.7
SMARCD2-206ENST00000577990 IGDCC4Q8TDY8 1250 aa25.93■■□□□ 1.74
SMARCD2-206ENST00000577990 SENP2Q9HC62 589 aa25.93■■□□□ 1.74
SMARCD2-206ENST00000577990 FLRT1Q9NZU1 646 aa25.93■■□□□ 1.74
SMARCD2-206ENST00000577990 SGPL1O95470 568 aa25.92■■□□□ 1.74
SMARCD2-206ENST00000577990 TKFCQ3LXA3 575 aa25.92■■□□□ 1.74
SMARCD2-206ENST00000577990 TSGA10IPQ3SY00 556 aa25.92■■□□□ 1.74
SMARCD2-206ENST00000577990 UBE2Q1Q7Z7E8 422 aa25.92■■□□□ 1.74
SMARCD2-206ENST00000577990 RASEFQ8IZ41 740 aa25.92■■□□□ 1.74
SMARCD2-206ENST00000577990 PAK6Q9NQU5 681 aaPredicted RBP25.92■■□□□ 1.74
SMARCD2-206ENST00000577990 HOMER2Q9NSB8 354 aa25.92■■□□□ 1.74
SMARCD2-206ENST00000577990 FARP2O94887 1054 aaPredicted RBP25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 ICAM1P05362 532 aa25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 PRKAR2AP13861 404 aaKnown RBP25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 COL9A3Q14050 684 aaPredicted RBP25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 MAP3K21Q5TCX8 1036 aa25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 MFSD14CQ5VZR4 134 aa25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 TMEM87BQ96K49 555 aa25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 UBA5Q9GZZ9 404 aa25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 ACAD9Q9H845 621 aa25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 RNF146Q9NTX7 359 aa25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 CCPG1Q9ULG6 757 aa25.91■■□□□ 1.74
SMARCD2-206ENST00000577990 PGK2P07205 417 aa25.9■■□□□ 1.74
SMARCD2-206ENST00000577990 ALAS1P13196 640 aa25.9■■□□□ 1.74
SMARCD2-206ENST00000577990 KRT32Q14532 448 aa25.9■■□□□ 1.74
SMARCD2-206ENST00000577990 OLFML2BQ68BL8 750 aa25.9■■□□□ 1.74
SMARCD2-206ENST00000577990 NEK1Q96PY6 1258 aa25.9■■□□□ 1.74
SMARCD2-206ENST00000577990 CPVLQ9H3G5 476 aa25.9■■□□□ 1.74
SMARCD2-206ENST00000577990 LY9Q9HBG7 655 aa25.9■■□□□ 1.74
SMARCD2-206ENST00000577990 RPTORQ8N122 1335 aa25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 ALPK3Q96L96 1907 aa25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 SH2B2O14492 632 aaPredicted RBP25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 TFRCP02786 760 aaKnown RBP25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 HSPA4P34932 840 aa25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 CACNB2Q08289 660 aaPredicted RBP25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 CATIPQ7Z7H3 387 aa25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 KCNB2Q92953 911 aa25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 TRERF1Q96PN7 1200 aa25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 HMX1Q9NP08 348 aaPredicted RBP25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 GPHNQ9NQX3 736 aaPredicted RBP25.89■■□□□ 1.74
SMARCD2-206ENST00000577990 PLXNA1Q9UIW2 1896 aa25.89■■□□□ 1.73
SMARCD2-206ENST00000577990 EPB41L2O43491 1005 aaKnown RBP25.88■■□□□ 1.73
SMARCD2-206ENST00000577990 IGHA2P01877 340 aa25.88■■□□□ 1.73
SMARCD2-206ENST00000577990 GRM4Q14833 912 aa25.88■■□□□ 1.73
SMARCD2-206ENST00000577990 ZNF792Q3KQV3 632 aa25.88■■□□□ 1.73
SMARCD2-206ENST00000577990 ANKRD35Q8N283 1001 aa25.88■■□□□ 1.73
SMARCD2-206ENST00000577990 DDX11Q96FC9 970 aa25.88■■□□□ 1.73
SMARCD2-206ENST00000577990 MAML3Q96JK9 1138 aa25.88■■□□□ 1.73
SMARCD2-206ENST00000577990 PNMA2Q9UL42 364 aa25.88■■□□□ 1.73
SMARCD2-206ENST00000577990 DIS3Q9Y2L1 958 aaKnown RBP25.88■■□□□ 1.73
SMARCD2-206ENST00000577990 TRIOBPQ9H2D6 2365 aa25.88■■□□□ 1.73
SMARCD2-206ENST00000577990 H0YGN5 161 aa25.87■■□□□ 1.73
SMARCD2-206ENST00000577990 TAL1P17542 331 aaPredicted RBP25.87■■□□□ 1.73
SMARCD2-206ENST00000577990 TROAPQ12815 778 aa25.87■■□□□ 1.73
SMARCD2-206ENST00000577990 ADCK5Q3MIX3 580 aa25.87■■□□□ 1.73
SMARCD2-206ENST00000577990 ADGRF4Q8IZF3 695 aa25.87■■□□□ 1.73
SMARCD2-206ENST00000577990 STAG2Q8N3U4 1231 aa25.87■■□□□ 1.73
SMARCD2-206ENST00000577990 DPF3Q92784 378 aa25.87■■□□□ 1.73
SMARCD2-206ENST00000577990 MAD2L2Q9UI95 211 aa25.87■■□□□ 1.73
SMARCD2-206ENST00000577990 WDR19Q8NEZ3 1342 aa25.87■■□□□ 1.73
SMARCD2-206ENST00000577990 SMCHD1A6NHR9 2005 aa25.87■■□□□ 1.73
SMARCD2-206ENST00000577990 DNAJC25-GNG10A0A024R161 153 aa25.86■■□□□ 1.73
SMARCD2-206ENST00000577990 PALM3A6NDB9 673 aaPredicted RBP25.86■■□□□ 1.73
SMARCD2-206ENST00000577990 CYP2C19P33261 490 aa25.86■■□□□ 1.73
SMARCD2-206ENST00000577990 LIFRP42702 1097 aa25.86■■□□□ 1.73
SMARCD2-206ENST00000577990 CDC37Q16543 378 aaPredicted RBP25.86■■□□□ 1.73
SMARCD2-206ENST00000577990 ZNF654Q8IZM8 581 aa25.86■■□□□ 1.73
SMARCD2-206ENST00000577990 TMTC2Q8N394 836 aa25.86■■□□□ 1.73
SMARCD2-206ENST00000577990 LRRC2Q9BYS8 371 aa25.86■■□□□ 1.73
SMARCD2-206ENST00000577990 KLRF2D3W0D1 207 aa25.85■■□□□ 1.73
SMARCD2-206ENST00000577990 DHX16O60231 1041 aaKnown RBP25.85■■□□□ 1.73
SMARCD2-206ENST00000577990 DDAH1O94760 285 aa25.85■■□□□ 1.73
SMARCD2-206ENST00000577990 MUM1L1Q5H9M0 696 aa25.85■■□□□ 1.73
SMARCD2-206ENST00000577990 NFXL1Q6ZNB6 911 aa25.85■■□□□ 1.73
SMARCD2-206ENST00000577990 DHX32Q7L7V1 743 aaKnown RBP25.85■■□□□ 1.73
SMARCD2-206ENST00000577990 CRISPLD2Q9H0B8 497 aa25.85■■□□□ 1.73
SMARCD2-206ENST00000577990 A1CFQ9NQ94 594 aaKnown RBP25.85■■□□□ 1.73
SMARCD2-206ENST00000577990 SNX14Q9Y5W7 946 aa25.85■■□□□ 1.73
SMARCD2-206ENST00000577990 FRMPD3Q5JV73 1810 aa25.85■■□□□ 1.73
SMARCD2-206ENST00000577990 CCDC69A6NI79 296 aa25.84■■□□□ 1.73
SMARCD2-206ENST00000577990 HMGB1P09429 215 aaKnown RBP25.84■■□□□ 1.73
SMARCD2-206ENST00000577990 RANBP2P49792 3224 aaKnown RBP25.84■■□□□ 1.73
SMARCD2-206ENST00000577990 DIS3LQ8TF46 1054 aaKnown RBP25.84■■□□□ 1.73
SMARCD2-206ENST00000577990 NUP133Q8WUM0 1156 aa25.84■■□□□ 1.73
SMARCD2-206ENST00000577990 PFASO15067 1338 aa25.84■■□□□ 1.73
SMARCD2-206ENST00000577990 CCND3P30281 292 aaPredicted RBP25.83■■□□□ 1.73
SMARCD2-206ENST00000577990 EXOSC10Q01780 885 aaKnown RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms