RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 DLGAP5Q15398 846 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 AOC3Q16853 763 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 TPD52L1Q16890 204 aaPredicted RBP7.69□□□□□ -1.18
SMG6-217ENST00000575338 ABCB5Q2M3G0 1257 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 CFAP100Q494V2 611 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 RRAGBQ5VZM2 374 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 RSBN1LQ6PCB5 846 aaPredicted RBP7.69□□□□□ -1.18
SMG6-217ENST00000575338 SH3RF1Q7Z6J0 888 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 NIM1KQ8IY84 436 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 LARGE2Q8N3Y3 721 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 PDILTQ8N807 584 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 MTMR14Q8NCE2 650 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 GMCL1P1Q8NEA9 526 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 KIAA1524Q8TCG1 905 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 PAGE5Q96GU1 130 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 PIGSQ96S52 555 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 TTC12Q9H892 705 aaPredicted RBP7.69□□□□□ -1.18
SMG6-217ENST00000575338 RIC8AQ9NPQ8 531 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 DDX4Q9NQI0 724 aaKnown RBP7.69□□□□□ -1.18
SMG6-217ENST00000575338 DISC1Q9NRI5 854 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 GINM1Q9NU53 330 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 SPTLC3Q9NUV7 552 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.69□□□□□ -1.18
SMG6-217ENST00000575338 IFNKQ9P0W0 207 aa7.69□□□□□ -1.18
SMG6-217ENST00000575338 EP400Q96L91 3159 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 AP5Z1O43299 807 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 MARCH6O60337 910 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 CCNT1O60563 726 aaKnown RBP7.68□□□□□ -1.18
SMG6-217ENST00000575338 FOSP01100 380 aaPredicted RBP7.68□□□□□ -1.18
SMG6-217ENST00000575338 VIL1P09327 827 aaKnown RBP7.68□□□□□ -1.18
SMG6-217ENST00000575338 GOLGA8HP0CJ92 632 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 PTGS1P23219 599 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 CHRNA5P30532 468 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 ATP2B2Q01814 1243 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 ICA1Q05084 483 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 DPYDQ12882 1025 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 PDIA5Q14554 519 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 KCNB1Q14721 858 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 NCAPHQ15003 741 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 INF2Q27J81 1249 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 LETM2Q2VYF4 491 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 EARS2Q5JPH6 523 aaKnown RBP7.68□□□□□ -1.18
SMG6-217ENST00000575338 SPECC1Q5M775 1068 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 ZNF658Q5TYW1 1059 aaPredicted RBP7.68□□□□□ -1.18
SMG6-217ENST00000575338 SPATA1Q5VX52 437 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 SLFN13Q68D06 897 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 PPP4R3AQ6IN85 833 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 MOXD1Q6UVY6 613 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 FAM83AQ86UY5 434 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 LRRC8AQ8IWT6 810 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 LRRC47Q8N1G4 583 aaKnown RBP7.68□□□□□ -1.18
SMG6-217ENST00000575338 KCTD17Q8N5Z5 321 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 NOC3LQ8WTT2 800 aaKnown RBP7.68□□□□□ -1.18
SMG6-217ENST00000575338 FAM151AQ8WW52 585 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 SHISA4Q96DD7 197 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 MTMR8Q96EF0 704 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 GMCL1Q96IK5 515 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 EPSTI1Q96J88 318 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 CDK5RAP3Q96JB5 506 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 EHMT1Q9H9B1 1298 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 VAT1LQ9HCJ6 419 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 GOPCQ9HD26 462 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 PIM2Q9P1W9 311 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 STK17AQ9UEE5 414 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 PNMA2Q9UL42 364 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 SYNRGQ9UMZ2 1314 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 KDM3AQ9Y4C1 1321 aa7.68□□□□□ -1.18
SMG6-217ENST00000575338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.67□□□□□ -1.18
SMG6-217ENST00000575338 BICDL2A1A5D9 508 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 GOLGA6L9A6NEM1 432 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 FAM205CA6NFA0 338 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 SPDYE2BA6NHP3 402 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 C21orf2O43822 256 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 TBC1D12O60347 775 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 SPDYE6P0CI01 402 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 EEF2P13639 858 aaKnown RBP7.67□□□□□ -1.18
SMG6-217ENST00000575338 RPS12P25398 132 aaKnown RBP7.67□□□□□ -1.18
SMG6-217ENST00000575338 LMOD1P29536 600 aaPredicted RBP7.67□□□□□ -1.18
SMG6-217ENST00000575338 AFMP43652 599 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 FXR2P51116 673 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMG6-217ENST00000575338 USP11P51784 963 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 GRIN1Q05586 938 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 NFIAQ12857 509 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 TNFAIP1Q13829 316 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 TRIM14Q14142 442 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 SEPT2Q15019 361 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 TNIP1Q15025 636 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 E2F4Q16254 413 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 CALCRLQ16602 461 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 PDXDC2PQ6P474 469 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 FILIP1Q7Z7B0 1213 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 SLC51AQ86UW1 340 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 CABP7Q86V35 215 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 FAM114A1Q8IWE2 563 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 SLFN12Q8IYM2 578 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 ADGRF4Q8IZF3 695 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 C4orf32Q8N8J7 132 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 TBCKQ8TEA7 893 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 JDP2Q8WYK2 163 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 ERCC4Q92889 916 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms