RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 ALX1Q15699 326 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 TSGA10IPQ3SY00 556 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 CERKLQ49MI3 558 aaPredicted RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 CCDC40Q4G0X9 1142 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 ZNF662Q6ZS27 426 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 SMYD4Q8IYR2 804 aaPredicted RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 NEK11Q8NG66 645 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 MRRFQ96E11 262 aaKnown RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 XPO4Q9C0E2 1151 aaKnown RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 TMEM39BQ9GZU3 492 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 RASSF4Q9H2L5 321 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 LY9Q9HBG7 655 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 JADE2Q9NQC1 790 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 GUCA1BQ9UMX6 200 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 AKR1B1P15121 316 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 RDXP35241 583 aaKnown RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 GMPSP49915 693 aaPredicted RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 SNAP25P60880 206 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 E2F4Q16254 413 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 C11orf57Q6ZUT1 292 aaPredicted RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 DYMQ7RTS9 669 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 MICALL2Q8IY33 904 aa8.49□□□□□ -1.05
RPA1-207ENST00000574049 ZNF274Q96GC6 653 aaPredicted RBP8.49□□□□□ -1.05
RPA1-207ENST00000574049 KIF5CO60282 957 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 MNAT1P51948 309 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 GYS2P54840 703 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 ST3GAL1Q11201 340 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 PRPF4BQ13523 1007 aaKnown RBP8.48□□□□□ -1.05
RPA1-207ENST00000574049 TNIP1Q15025 636 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 IGDCC4Q8TDY8 1250 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 CNOT7Q9UIV1 285 aaKnown RBP8.48□□□□□ -1.05
RPA1-207ENST00000574049 PCDHA7Q9UN72 937 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 PAXBP1Q9Y5B6 917 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 COL4A1P02462 1669 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 DDTLA6NHG4 134 aaPredicted RBP8.48□□□□□ -1.05
RPA1-207ENST00000574049 HGSO14964 777 aaPredicted RBP8.48□□□□□ -1.05
RPA1-207ENST00000574049 CASP1P29466 404 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 NOP2P46087 812 aaKnown RBP8.48□□□□□ -1.05
RPA1-207ENST00000574049 ZNF75DP51815 510 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 SHROOM1Q2M3G4 852 aaPredicted RBP8.48□□□□□ -1.05
RPA1-207ENST00000574049 UVSSAQ2YD98 709 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 APOBEC3HQ6NTF7 200 aaKnown RBP8.48□□□□□ -1.05
RPA1-207ENST00000574049 KCTD1Q719H9 257 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 CEP95Q96GE4 821 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 CCDC113Q9H0I3 377 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 RPAP1Q9BWH6 1393 aaPredicted RBP8.48□□□□□ -1.05
RPA1-207ENST00000574049 CHMP2AO43633 222 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 AKR1B10O60218 316 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 DDNO94850 711 aaPredicted RBP8.48□□□□□ -1.05
RPA1-207ENST00000574049 GUCY1A2P33402 732 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 ZNF397Q8NF99 534 aaPredicted RBP8.48□□□□□ -1.05
RPA1-207ENST00000574049 NFE2L3Q9Y4A8 694 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 NUP188Q5SRE5 1749 aa8.48□□□□□ -1.05
RPA1-207ENST00000574049 GH2P01242 217 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 SEPT2Q15019 361 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 SYCP1Q15431 976 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 USH1GQ495M9 461 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 STAG2Q8N3U4 1231 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.47□□□□□ -1.05
RPA1-207ENST00000574049 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 AK9Q5TCS8 1911 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.47□□□□□ -1.05
RPA1-207ENST00000574049 TMCO5BA8MYB1 307 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 WDHD1O75717 1129 aaPredicted RBP8.47□□□□□ -1.05
RPA1-207ENST00000574049 KCNA3P22001 575 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 RHBDL3P58872 404 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 GRM1Q13255 1194 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 ZNF569Q5MCW4 686 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 CALML4Q96GE6 196 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 PGBD1Q96JS3 809 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 POLD4Q9HCU8 107 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 CICQ96RK0 1608 aaPredicted RBP8.47□□□□□ -1.05
RPA1-207ENST00000574049 FAM205AQ6ZU69 1335 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 KLRF2D3W0D1 207 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 SORBS3O60504 671 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 PARP1P09874 1014 aaKnown RBP8.47□□□□□ -1.05
RPA1-207ENST00000574049 ATP1A3P13637 1013 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 PFKFB1P16118 471 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 KRT2P35908 639 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 GABPB1Q06547 395 aaPredicted RBP8.47□□□□□ -1.05
RPA1-207ENST00000574049 SPA17Q15506 151 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 DLK2Q6UY11 383 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 KCNB2Q92953 911 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 TMEM47Q9BQJ4 181 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 SYT17Q9BSW7 474 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 OSBPL5Q9H0X9 879 aaPredicted RBP8.47□□□□□ -1.05
RPA1-207ENST00000574049 CLSTN2Q9H4D0 955 aa8.47□□□□□ -1.05
RPA1-207ENST00000574049 A6NJR5 290 aa8.46□□□□□ -1.05
RPA1-207ENST00000574049 ZSCAN12O43309 604 aa8.46□□□□□ -1.05
RPA1-207ENST00000574049 SLU7O95391 586 aaKnown RBP8.46□□□□□ -1.05
RPA1-207ENST00000574049 CTDNEP1O95476 244 aa8.46□□□□□ -1.05
RPA1-207ENST00000574049 SLC1A4P43007 532 aa8.46□□□□□ -1.05
RPA1-207ENST00000574049 PPP4CP60510 307 aa8.46□□□□□ -1.05
RPA1-207ENST00000574049 TMEM266Q2M3C6 531 aa8.46□□□□□ -1.05
RPA1-207ENST00000574049 DPCR1Q3MIW9 517 aa8.46□□□□□ -1.05
RPA1-207ENST00000574049 CDAN1Q8IWY9 1227 aa8.46□□□□□ -1.05
RPA1-207ENST00000574049 CPXCR1Q8N123 301 aa8.46□□□□□ -1.05
RPA1-207ENST00000574049 PI4KBQ9UBF8 816 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms