RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 PHF20Q9BVI0 1012 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 CLSTN2Q9H4D0 955 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 STK36Q9NRP7 1315 aa15.85■□□□□ 0.13
TVP23A-207ENST00000573360 ZNF202O95125 648 aa15.85■□□□□ 0.13
TVP23A-207ENST00000573360 SGIP1Q9BQI5 828 aa15.85■□□□□ 0.13
TVP23A-207ENST00000573360 PCDHA1Q9Y5I3 950 aa15.85■□□□□ 0.13
TVP23A-207ENST00000573360 COL4A5P29400 1685 aa15.85■□□□□ 0.13
TVP23A-207ENST00000573360 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
TVP23A-207ENST00000573360 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
TVP23A-207ENST00000573360 KRI1Q8N9T8 703 aaKnown RBP15.85■□□□□ 0.13
TVP23A-207ENST00000573360 CNNM3Q8NE01 707 aa15.85■□□□□ 0.13
TVP23A-207ENST00000573360 FOXP1Q9H334 677 aaPredicted RBP15.85■□□□□ 0.13
TVP23A-207ENST00000573360 POLR3EQ9NVU0 708 aa15.85■□□□□ 0.13
TVP23A-207ENST00000573360 TRMT1Q9NXH9 659 aaKnown RBP15.85■□□□□ 0.13
TVP23A-207ENST00000573360 ADAMTSL1Q8N6G6 1762 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 ENTPD3O75355 529 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 ZNF543Q08ER8 600 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 C6orf50Q9HD87 102 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 FOXN1O15353 648 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 TNNT1P13805 278 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 FAM160A1Q05DH4 1040 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 C9orf131Q5VYM1 1079 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 ADALQ6DHV7 355 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 TANGO6Q9C0B7 1094 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 CSRNP2Q9H175 543 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 CTDP1Q9Y5B0 961 aaPredicted RBP15.84■□□□□ 0.13
TVP23A-207ENST00000573360 YEATS4O95619 227 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 PDCL2Q8N4E4 241 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 JMJD4Q9H9V9 463 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 A0A1B0GUL6 1792 aa15.84■□□□□ 0.13
TVP23A-207ENST00000573360 PP2D1A8MPX8 630 aa15.83■□□□□ 0.13
TVP23A-207ENST00000573360 CALML3P27482 149 aa15.83■□□□□ 0.13
TVP23A-207ENST00000573360 LMOD1P29536 600 aaPredicted RBP15.83■□□□□ 0.13
TVP23A-207ENST00000573360 GRIPAP1Q4V328 841 aa15.83■□□□□ 0.13
TVP23A-207ENST00000573360 CCDC148Q8NFR7 591 aa15.83■□□□□ 0.13
TVP23A-207ENST00000573360 WRNIP1Q96S55 665 aa15.83■□□□□ 0.13
TVP23A-207ENST00000573360 ARHGEF10LQ9HCE6 1279 aa15.83■□□□□ 0.13
TVP23A-207ENST00000573360 ELP1O95163 1332 aa15.83■□□□□ 0.12
TVP23A-207ENST00000573360 LMNB1P20700 586 aa15.83■□□□□ 0.12
TVP23A-207ENST00000573360 SHC4Q6S5L8 630 aa15.83■□□□□ 0.12
TVP23A-207ENST00000573360 REXO1Q8N1G1 1221 aaKnown RBP15.83■□□□□ 0.12
TVP23A-207ENST00000573360 TCP11L1Q9NUJ3 509 aa15.83■□□□□ 0.12
TVP23A-207ENST00000573360 ZBTB21Q9ULJ3 1066 aa15.83■□□□□ 0.12
TVP23A-207ENST00000573360 CFBP00751 764 aa15.83■□□□□ 0.12
TVP23A-207ENST00000573360 YBX3P16989 372 aaKnown RBP eCLIP15.83■□□□□ 0.12
TVP23A-207ENST00000573360 ZNF75DP51815 510 aa15.83■□□□□ 0.12
TVP23A-207ENST00000573360 PNOCQ13519 176 aa15.83■□□□□ 0.12
TVP23A-207ENST00000573360 KCNH3Q9ULD8 1083 aa15.83■□□□□ 0.12
TVP23A-207ENST00000573360 PCDHA4Q9UN74 947 aa15.83■□□□□ 0.12
TVP23A-207ENST00000573360 BMP3P12645 472 aa15.82■□□□□ 0.12
TVP23A-207ENST00000573360 SPP2Q13103 211 aa15.82■□□□□ 0.12
TVP23A-207ENST00000573360 CDC37Q16543 378 aaPredicted RBP15.82■□□□□ 0.12
TVP23A-207ENST00000573360 QRICH1Q2TAL8 776 aa15.82■□□□□ 0.12
TVP23A-207ENST00000573360 STXBP3O00186 592 aa15.82■□□□□ 0.12
TVP23A-207ENST00000573360 TXKP42681 527 aa15.82■□□□□ 0.12
TVP23A-207ENST00000573360 TBCKQ8TEA7 893 aa15.82■□□□□ 0.12
TVP23A-207ENST00000573360 BARHL2Q9NY43 387 aa15.82■□□□□ 0.12
TVP23A-207ENST00000573360 ROBO3Q96MS0 1386 aa15.82■□□□□ 0.12
TVP23A-207ENST00000573360 ASPRV1Q53RT3 343 aa15.82■□□□□ 0.12
TVP23A-207ENST00000573360 TNFAIP1Q13829 316 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 KLHL10Q6JEL2 608 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 PKD2L1Q9P0L9 805 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 ARID5BQ14865 1188 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 PSTPIP2Q9H939 334 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 CEP131Q9UPN4 1083 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 COBLO75128 1261 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 ADCY7P51828 1080 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 RCAN1P53805 252 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 FKBP1AP62942 108 aaKnown RBP15.81■□□□□ 0.12
TVP23A-207ENST00000573360 LONRF3Q496Y0 759 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 SIAH1Q8IUQ4 282 aa15.81■□□□□ 0.12
TVP23A-207ENST00000573360 SMC2O95347 1197 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 GNA11P29992 359 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 MKRN3Q13064 507 aaKnown RBP15.8■□□□□ 0.12
TVP23A-207ENST00000573360 KIAA1755Q5JYT7 1200 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 C11orf57Q6ZUT1 292 aaPredicted RBP15.8■□□□□ 0.12
TVP23A-207ENST00000573360 CCDC12Q8WUD4 166 aaPredicted RBP15.8■□□□□ 0.12
TVP23A-207ENST00000573360 SERTAD1Q9UHV2 236 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 PTPAQ15257 358 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 AXDND1Q5T1B0 1012 aaPredicted RBP15.8■□□□□ 0.12
TVP23A-207ENST00000573360 SLC30A10Q6XR72 485 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 MAP3K14Q99558 947 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 PCDHA6Q9UN73 950 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 PCDHA8Q9Y5H6 950 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 IGSF3O75054 1194 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 SSBP05455 408 aaKnown RBP eCLIP15.8■□□□□ 0.12
TVP23A-207ENST00000573360 PLS1Q14651 629 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 MOB2Q70IA6 237 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 CCDC112Q8NEF3 446 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 SYMPKQ92797 1274 aaKnown RBP15.8■□□□□ 0.12
TVP23A-207ENST00000573360 EHD4Q9H223 541 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.8■□□□□ 0.12
TVP23A-207ENST00000573360 ZHX2Q9Y6X8 837 aa15.8■□□□□ 0.12
TVP23A-207ENST00000573360 V9GYY5 206 aaPredicted RBP15.8■□□□□ 0.12
TVP23A-207ENST00000573360 ADM5C9JUS6 153 aa15.79■□□□□ 0.12
TVP23A-207ENST00000573360 NPY5RQ15761 445 aa15.79■□□□□ 0.12
TVP23A-207ENST00000573360 GPATCH4Q5T3I0 446 aaKnown RBP15.79■□□□□ 0.12
TVP23A-207ENST00000573360 AOPEPQ8N6M6 819 aa15.79■□□□□ 0.12
TVP23A-207ENST00000573360 MRIQ9BWK5 157 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms