RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 AKNAD1Q5T1N1 836 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 MFSD6Q6ZSS7 791 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 TICAM2Q86XR7 235 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 CHST13Q8NET6 341 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 FGD4Q96M96 766 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 IL25Q9H293 177 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 GPCPD1Q9NPB8 672 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 XPNPEP3Q9NQH7 507 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 RNF146Q9NTX7 359 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 CNPY2Q9Y2B0 182 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 ATP11BQ9Y2G3 1177 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 SNAI1O95863 264 aaPredicted RBP16.22■□□□□ 0.19
RAB40B-204ENST00000571554 RARBP10826 455 aa16.22■□□□□ 0.19
RAB40B-204ENST00000571554 TOP1P11387 765 aaKnown RBP16.22■□□□□ 0.19
RAB40B-204ENST00000571554 GSPT1P15170 499 aaKnown RBP16.22■□□□□ 0.19
RAB40B-204ENST00000571554 NOVP48745 357 aa16.22■□□□□ 0.19
RAB40B-204ENST00000571554 OAZ1P54368 228 aa16.22■□□□□ 0.19
RAB40B-204ENST00000571554 RTP1P59025 263 aa16.22■□□□□ 0.19
RAB40B-204ENST00000571554 MDM2Q00987 491 aaPredicted RBP16.22■□□□□ 0.19
RAB40B-204ENST00000571554 CNTN2Q02246 1040 aa16.22■□□□□ 0.19
RAB40B-204ENST00000571554 GDF15Q99988 308 aa16.22■□□□□ 0.19
RAB40B-204ENST00000571554 ACAD9Q9H845 621 aa16.22■□□□□ 0.19
RAB40B-204ENST00000571554 DDX49Q9Y6V7 483 aaKnown RBP16.22■□□□□ 0.19
RAB40B-204ENST00000571554 SOX1O00570 391 aaPredicted RBP16.21■□□□□ 0.19
RAB40B-204ENST00000571554 ZNF213O14771 459 aa16.21■□□□□ 0.19
RAB40B-204ENST00000571554 MUM1L1Q5H9M0 696 aa16.21■□□□□ 0.19
RAB40B-204ENST00000571554 DCAF4Q8WV16 495 aa16.21■□□□□ 0.19
RAB40B-204ENST00000571554 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.19
RAB40B-204ENST00000571554 A1CFQ9NQ94 594 aaKnown RBP16.21■□□□□ 0.19
RAB40B-204ENST00000571554 FBXO40Q9UH90 709 aa16.21■□□□□ 0.19
RAB40B-204ENST00000571554 NRBP1Q9UHY1 535 aa16.21■□□□□ 0.19
RAB40B-204ENST00000571554 SZT2Q5T011 3432 aa16.2■□□□□ 0.18
RAB40B-204ENST00000571554 HIP1O00291 1037 aa16.2■□□□□ 0.18
RAB40B-204ENST00000571554 AKR1A1P14550 325 aa16.2■□□□□ 0.18
RAB40B-204ENST00000571554 IRX5P78411 483 aaPredicted RBP16.2■□□□□ 0.18
RAB40B-204ENST00000571554 TRIM60Q495X7 471 aa16.2■□□□□ 0.18
RAB40B-204ENST00000571554 TTC22Q5TAA0 569 aa16.2■□□□□ 0.18
RAB40B-204ENST00000571554 SLC39A5Q6ZMH5 540 aa16.2■□□□□ 0.18
RAB40B-204ENST00000571554 TCP11L1Q9NUJ3 509 aa16.2■□□□□ 0.18
RAB40B-204ENST00000571554 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.2■□□□□ 0.18
RAB40B-204ENST00000571554 CCPG1Q9ULG6 757 aa16.2■□□□□ 0.18
RAB40B-204ENST00000571554 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 B4E1Z4 1266 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 POTEB2H3BUK9 544 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 ADCY6O43306 1168 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 PLA2G6O60733 806 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 KDM4AO75164 1064 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 FDX1P10109 184 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 PDHBP11177 359 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 SYDE2Q5VT97 1194 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 MAMDC4Q6UXC1 1216 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 NSMFQ6X4W1 530 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.19■□□□□ 0.18
RAB40B-204ENST00000571554 ARMCX2Q7L311 632 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 ESR2Q92731 530 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 LRCH3Q96II8 777 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 PURBQ96QR8 312 aaKnown RBP16.19■□□□□ 0.18
RAB40B-204ENST00000571554 UBE2OQ9C0C9 1292 aaKnown RBP16.19■□□□□ 0.18
RAB40B-204ENST00000571554 RNF41Q9H4P4 317 aaPredicted RBP16.19■□□□□ 0.18
RAB40B-204ENST00000571554 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
RAB40B-204ENST00000571554 LCTP09848 1927 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
RAB40B-204ENST00000571554 MYADML2A6NDP7 307 aa16.18■□□□□ 0.18
RAB40B-204ENST00000571554 SOWAHBA6NEL2 793 aa16.18■□□□□ 0.18
RAB40B-204ENST00000571554 GOLGA8HP0CJ92 632 aa16.18■□□□□ 0.18
RAB40B-204ENST00000571554 ACVR2BQ13705 512 aa16.18■□□□□ 0.18
RAB40B-204ENST00000571554 ZNF467Q7Z7K2 595 aaPredicted RBP16.18■□□□□ 0.18
RAB40B-204ENST00000571554 RNF180Q86T96 592 aa16.18■□□□□ 0.18
RAB40B-204ENST00000571554 MSL3Q8N5Y2 521 aaKnown RBP16.18■□□□□ 0.18
RAB40B-204ENST00000571554 FAM133AQ8N9E0 248 aa16.18■□□□□ 0.18
RAB40B-204ENST00000571554 RANBP17Q9H2T7 1088 aaKnown RBP16.18■□□□□ 0.18
RAB40B-204ENST00000571554 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
RAB40B-204ENST00000571554 FAM184BQ9ULE4 1060 aa16.18■□□□□ 0.18
RAB40B-204ENST00000571554 LRRC37A2A6NM11 1700 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 ADAMTS4O75173 837 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 ICAM1P05362 532 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 PTGS1P23219 599 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 BMP8BP34820 402 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 TKFCQ3LXA3 575 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 CCDC144BQ3MJ40 725 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 DSCC1Q9BVC3 393 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 PHF24Q9UPV7 400 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 LAMA3Q16787 3333 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 LTBP2Q14767 1821 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 ASTN1O14525 1302 aa16.17■□□□□ 0.18
RAB40B-204ENST00000571554 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.16■□□□□ 0.18
RAB40B-204ENST00000571554 A0A1W2PPC1 479 aa16.16■□□□□ 0.18
RAB40B-204ENST00000571554 A0A1W2PQ45 241 aaPredicted RBP16.16■□□□□ 0.18
RAB40B-204ENST00000571554 A0A1W2PQY0 241 aa16.16■□□□□ 0.18
RAB40B-204ENST00000571554 NFIBO00712 420 aa16.16■□□□□ 0.18
RAB40B-204ENST00000571554 PCP11498 1178 aaKnown RBP16.16■□□□□ 0.18
RAB40B-204ENST00000571554 ZNF543Q08ER8 600 aa16.16■□□□□ 0.18
RAB40B-204ENST00000571554 IMMTQ16891 758 aaKnown RBP16.16■□□□□ 0.18
RAB40B-204ENST00000571554 BTNL9Q6UXG8 535 aa16.16■□□□□ 0.18
RAB40B-204ENST00000571554 EEPD1Q7L9B9 569 aa16.16■□□□□ 0.18
RAB40B-204ENST00000571554 ABHD16BQ9H3Z7 469 aa16.16■□□□□ 0.18
RAB40B-204ENST00000571554 CYP39A1Q9NYL5 469 aa16.16■□□□□ 0.18
RAB40B-204ENST00000571554 PRKAG2Q9UGJ0 569 aa16.16■□□□□ 0.18
RAB40B-204ENST00000571554 SNX17Q15036 470 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms