RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PCDHB10Q9UN67 800 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 SOX13Q9UN79 622 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 MRPS23Q9Y3D9 190 aaKnown RBP4.1□□□□□ -1.75
CNOT1-221ENST00000569924 CCDC7Q96M83 1385 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 MAP3K5Q99683 1374 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 TNS2Q63HR2 1409 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 MYOM1P52179 1685 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 USP54Q70EL1 1684 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 RGPD5Q99666 1765 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 A0A1W2PQU0 124 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 AKAP10O43572 662 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 KATNA1O75449 491 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 ZBTB7AO95365 584 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 NPTXRO95502 500 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 SDSP20132 328 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 CDK8P49336 464 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 ZNF143P52747 638 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-221ENST00000569924 AP3B2Q13367 1082 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 UBAP2LQ14157 1087 aaKnown RBP4.09□□□□□ -1.75
CNOT1-221ENST00000569924 HSP90AA2PQ14568 343 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-221ENST00000569924 RALBP1Q15311 655 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 SLC15A2Q16348 729 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 TXNRD1Q16881 649 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 GNPTABQ3T906 1256 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 C4orf46Q504U0 113 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 RNF219Q5W0B1 726 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-221ENST00000569924 CEP135Q66GS9 1140 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 MAP1SQ66K74 1059 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-221ENST00000569924 OVOS1Q6IE37 1185 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 CNNM4Q6P4Q7 775 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 HFE2Q6ZVN8 426 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 NLRC3Q7RTR2 1065 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 STRA8Q7Z7C7 330 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 C14orf80Q86SX3 495 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 PPM1KQ8N3J5 372 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 EVI5LQ96CN4 794 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 PDGFDQ9GZP0 370 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-221ENST00000569924 ADAM19Q9H013 955 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 MTFR1LQ9H019 292 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 ZNF700Q9H0M5 742 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 ARHGEF4Q9NR80 690 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 SLC5A4Q9NY91 659 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 ZIM2Q9NZV7 527 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 REV1Q9UBZ9 1251 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 DACH1Q9UI36 760 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 ZNF214Q9UL59 606 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-221ENST00000569924 CORINQ9Y5Q5 1042 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 TACC3Q9Y6A5 838 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 SNCAIPQ9Y6H5 919 aa4.09□□□□□ -1.75
CNOT1-221ENST00000569924 PAPPAQ13219 1627 aa4.09□□□□□ -1.76
CNOT1-221ENST00000569924 NHSQ6T4R5 1651 aa4.09□□□□□ -1.76
CNOT1-221ENST00000569924 MON2Q7Z3U7 1717 aa4.09□□□□□ -1.76
CNOT1-221ENST00000569924 TRBV23-1A0A0A0MS06 115 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 TRAV20A0A0B4J274 112 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 E2F8A0AVK6 867 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 HMGB1P1B2RPK0 211 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 BNIP3LO60238 219 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 RGS20O76081 388 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 LDHAP00338 332 aaKnown RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 THBS1P07996 1170 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 GSTP1P09211 210 aaKnown RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 ESRRAP11474 423 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 SELPP16109 830 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 PTPRAP18433 802 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 POU3F2P20265 443 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 MLLT1Q03111 559 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 NEUROD1Q13562 356 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 MTMR1Q13613 665 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 SCARF1Q14162 830 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 CHD4Q14839 1912 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 SV2CQ496J9 727 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 WIPI1Q5MNZ9 446 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 TMEM201Q5SNT2 666 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 SYCP2LQ5T4T6 812 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 CEP350Q5VT06 3117 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 PPP4R4Q6NUP7 873 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 RAB44Q7Z6P3 723 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 KTN1Q86UP2 1357 aaKnown RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 TTC8Q8TAM2 541 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 WDR66Q8TBY9 1149 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 LEO1Q8WVC0 666 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 MPHOSPH6Q99547 160 aaKnown RBP4.08□□□□□ -1.76
CNOT1-221ENST00000569924 SYT17Q9BSW7 474 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 NDFIP2Q9NV92 336 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 HCN2Q9UL51 889 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 PCDHA4Q9UN74 947 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 UTRNP46939 3433 aa4.08□□□□□ -1.76
CNOT1-221ENST00000569924 COL24A1Q17RW2 1714 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 QSER1Q2KHR3 1735 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 ROCK2O75116 1388 aaKnown RBP4.07□□□□□ -1.76
CNOT1-221ENST00000569924 GPR39O43194 453 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 BRINP1O60477 761 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 DNAJA2O60884 412 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 PPFIA4O75335 1185 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 NAT2P11245 290 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 IL2RBP14784 551 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 PLCG1P19174 1290 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 PDE4BQ07343 736 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 ITKQ08881 620 aa4.07□□□□□ -1.76
CNOT1-221ENST00000569924 STRN3Q13033 797 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms