RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 AGBL1Q96MI9 1066 aa12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 SLC5A4Q9NY91 659 aa12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 DIS3Q9Y2L1 958 aaKnown RBP12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 DNAJC25-GNG10A0A024R161 153 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 ICAM1P05362 532 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 PGK2P07205 417 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 SNAP25P60880 206 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 ZNF792Q3KQV3 632 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 TKFCQ3LXA3 575 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 MFSD14CQ5VZR4 134 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 IGDCC4Q8TDY8 1250 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 DEFB118Q96PH6 123 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 MTA3Q9BTC8 594 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 FBXO40Q9UH90 709 aa12.97□□□□□ -0.33
SHCBP1-207ENST00000569702 IFIT3O14879 490 aaKnown RBP12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 GOLGA8HP0CJ92 632 aa12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 CYP2C19P33261 490 aa12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 SLC4A3P48751 1232 aa12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 COL9A3Q14050 684 aaPredicted RBP12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 SART3Q15020 963 aaKnown RBP12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 TSGA10IPQ3SY00 556 aa12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 ASPRV1Q53RT3 343 aa12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 CCDC174Q6PII3 467 aa12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 CHST3Q7LGC8 479 aa12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 UBE2Q1Q7Z7E8 422 aa12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 SENP2Q9HC62 589 aa12.96□□□□□ -0.33
SHCBP1-207ENST00000569702 ERICH2A1L162 156 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 PARP1P09874 1014 aaKnown RBP12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 CYBAP13498 195 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 CCND3P30281 292 aaPredicted RBP12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 MCM5P33992 734 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 RNF20Q5VTR2 975 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 LHX8Q68G74 356 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 TRPV1Q8NER1 839 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 DDX11Q96FC9 970 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 TRERF1Q96PN7 1200 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 CPVLQ9H3G5 476 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 ACAD9Q9H845 621 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 HOMER2Q9NSB8 354 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 RNF146Q9NTX7 359 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 PNMA2Q9UL42 364 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 CCPG1Q9ULG6 757 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 SMCHD1A6NHR9 2005 aa12.95□□□□□ -0.34
SHCBP1-207ENST00000569702 WDR19Q8NEZ3 1342 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 PDE4DIPQ5VU43 2346 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 PALM3A6NDB9 673 aaPredicted RBP12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 PRC1O43663 620 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 TFRCP02786 760 aaKnown RBP12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 ALAS1P13196 640 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 TROAPQ12815 778 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 WTAPQ15007 396 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 MUM1L1Q5H9M0 696 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 TMEM67Q5HYA8 995 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 ANKRD35Q8N283 1001 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 STAG2Q8N3U4 1231 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 KCNB2Q92953 911 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 FGD4Q96M96 766 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 TINF2Q9BSI4 451 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 LY9Q9HBG7 655 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 A1CFQ9NQ94 594 aaKnown RBP12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 MAD2L2Q9UI95 211 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 OGDHLQ9ULD0 1010 aa12.94□□□□□ -0.34
SHCBP1-207ENST00000569702 PLXNA1Q9UIW2 1896 aa12.93□□□□□ -0.34
SHCBP1-207ENST00000569702 TAL1P17542 331 aaPredicted RBP12.93□□□□□ -0.34
SHCBP1-207ENST00000569702 GRM4Q14833 912 aa12.93□□□□□ -0.34
SHCBP1-207ENST00000569702 MAMDC4Q6UXC1 1216 aa12.93□□□□□ -0.34
SHCBP1-207ENST00000569702 ADGRF4Q8IZF3 695 aa12.93□□□□□ -0.34
SHCBP1-207ENST00000569702 FAM133AQ8N9E0 248 aa12.93□□□□□ -0.34
SHCBP1-207ENST00000569702 TMEM87BQ96K49 555 aa12.93□□□□□ -0.34
SHCBP1-207ENST00000569702 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
SHCBP1-207ENST00000569702 NRBP1Q9UHY1 535 aa12.93□□□□□ -0.34
SHCBP1-207ENST00000569702 SYNGAP1Q96PV0 1343 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 KLRF2D3W0D1 207 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 SH2B2O14492 632 aaPredicted RBP12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 EPB41L2O43491 1005 aaKnown RBP12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 REC8O95072 547 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 HSPA4P34932 840 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 LIFRP42702 1097 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 CNTN2Q02246 1040 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 ADCK5Q3MIX3 580 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 PRAMEF19Q5SWL8 479 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 TMTC2Q8N394 836 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 ANKLE1Q8NAG6 615 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 CLEC4DQ8WXI8 215 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 MTMR8Q96EF0 704 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 NEK1Q96PY6 1258 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 MAP3K14Q99558 947 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 JMJD4Q9H9V9 463 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 CYP39A1Q9NYL5 469 aa12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 DDX20Q9UHI6 824 aaKnown RBP12.92□□□□□ -0.34
SHCBP1-207ENST00000569702 PFASO15067 1338 aa12.91□□□□□ -0.34
SHCBP1-207ENST00000569702 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms